transcript:BL97317_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL97317_cuf1
Unique Nametranscript:BL97317_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL97317_cuf1

>transcript:BL97317_cuf1-protein ID=transcript:BL97317_cuf1-protein|Name=transcript:BL97317_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=843bp
VLLQPEIKYVFHVRAWYGSHEYLDFQSNGILTDFTPPAVSKSRKVNDLSD
VGHVVDVDFINSTSQLGVGWRNVFIDQEVGVAYFLVSLSTFPGGEDIIPF
SRFNLSSTTDEILLHDLTLEPDIKYYSNVRAFNRAGMHTTVSSDGVLVDT
ERPTAGVVQDGSGVHDADYQNSSCRVAATWHGFSDLQSFIHHYTCCFGTA
PGRDDVSPCEDVGLRLSAARDIPCTLQNGTRYYATVYAVDASGLWSPSAI
SDGVTVDTTAPVPLEKVSFGRNLLLNPSFEDVQTVNVGLPESWLISGIAN
VSSPSQAISQDGTSYLLLLGSVSQTVSTIPGDKYRLSFQASPIFPSNTPV
LSQEGYVQGPGLHRVFKLYQRPSHLEGTQLHLDTNITWHHHVFYFTAVQT
VSNITIGSAGVWNGVALDNVQVQKLQLGPQSPSAGPVRLHTRFVHGWTSV
HAAWDFVDPESPIIDYSWAIGTARGGTQLQSFRSVGRNAHAQNSHIRLDH
GAFIHVTVVAETAAELRTVVHSDPVLVDLTPPVISDVKDGGQLEDLDYQN
TSFISLYWDVRDDESGVDFCEWTIGLSPGSGELQPFVRLPSTLHAVSDLG
GNVTHGQTVYPTVRCTNQAGVTSHVTSDGVTIELQPPESDRAIVETVTGS
SSYYPIRGQHQAATDVVHVTWSGFFDESGIHHYQVRMLSRDLPDFPWTDV
GLNGQTHVTLSGLHLRSYNRYQVQVRAVNHVGVVSDVAFSEVVIETEKPH
VVGPTFRSWWPQPSVLQFDWTGVFASNSSLVYEVSVGTHPGGCDVLKWVE
TEMTEMSMNNVDNNKEHFVVITAINQAGLYLGENFALSYPANG
Run BLAST on NCBI

mRNA from alignment at Sc0000207:295716..306816-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL97317_cuf1 ID=transcript:BL97317_cuf1|Name=transcript:BL97317_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=11101bp|location=Sequence derived from alignment at Sc0000207:295716..306816- (Branchiostoma lanceolatum)
CAGTTCTTCTCCAGCCGGAGATCAAGTATGTGTTTCACGTGCGGGCCTGG TACGGTAGTCATGAGTACCTGGACTTCCAATCGAACGGGATCCTCACAGA CTTCACTCCACCCGCTGTGTCAAAGTCAAGGAAGGTAAATCTATCATTTG TCAATACAAACACCAGTATAAGCGAGGTTAATAGTGTTATCAGATCGATC CATGAGCATTCAAAACCCAGAAAAATATGTAAAGCCCCTGTCACACTTGT GCGTATATACAAGTCCGCATGAGTTGCGTATTAACATGTTTTTGGTTTAG GTTAAGTTTGCAGCCGAAGAAGTGATTTCATTGGTTTGATTACTAGACTG CTCAACAGTGGGTGAAATTAGAAAACAACATCCTCCCCGCAAACTTTACT TAAACGAAAGAATGTTACTGCGGAACTCATGCGCACTTGAATATACGCAC AAGTGTGACAGGGCCCTAAGGCTTTTGTACGTACAAACAATTTACGAATG CATCTGGCAAGTAAATTCACTTCGCTATGACAAACTGCAACAAGAAAGAA TGGTAGTTCACATCATTGCTCAACTGTTTTATATTTTGTTTACCTTTAAG ACGCTACTGTATTACCTTTCTGTTTTCCCGTTACGATATATCCATCCATT CTTTTAGAGTACCTGATGTTGAGGAGGACAATCCTTCAGATTCTATTTCC ATTTGATCAGTAGATTTTAATACACTTTTGGATAATACTTCGGCAAACTT AAAATGGCCAATAGCAAGCAAAAAATTTCAAAAATGTTATCTCGCCGTAG GTAAATGACCTGTCGGACGTCGGCCATGTAGTTGACGTTGACTTCATTAA CAGTACGTCACAGCTGGGGGTGGGATGGAGGAACGTCTTCATAGACCAGG AAGTGGGAGTGGCATATTTCCTGGTCTCTCTCAGCACTTTTCCCGGAGGT AATTGTCCAATCAAATTTTACCTCTTATTTCGCTTTCCTTTTTTGCATTG TGAAGTAAGACGGTACAAAAGAAGACAAAGTTGATGCTGATGATTCAATT ATCAATGTTGTATGGGTACGTGAGCAAATTGTTGTCTCGCGGGGGTGGCA GGGCAGAGACTCCAGGTGCCGGAGAGTTCGACACGTATACCTCCTTTTCT GTTGAGTACCTCGTTACCTGGATGTCTCACCTTTATTGACGTAGTCCTAA AGAGATTTGTTATTGAAATTGCCAATCAAGCTGTGAATGTATTTAAATGA AGCGTTTTCTTTGTATACACACCCAGGAGAAGACATCATTCCGTTCAGTC GCTTCAATCTGTCTTCCACTACGGACGAGATCCTGCTACACGACCTTACA CTTGAACCCGACATCAAGTACTACAGTAACGTCAGGGCTTTCAACCGTGC GGGGATGCATACAACTGTCAGCTCCGATGGGGTTTTGGTGAGTGTCAATA GATCTTTTTTTATCTATGGCTCTATGGTATAAATTGCATTGTTGCCTTCA CTGTAAGACACACATTATAAATTCGCCGTCGGTTTAACAACGACTTGTCT GGTTGTAAGCTTCAGTGTGCTTGCCCAGAGTGTAGTTGTAGAAGTGGCAA TAGTGTGGTGGTCTTGAGTGTAGTTGTAGCGACACTAGTGAGATGGCCTT GAGTGGATGTTTTTGCCGATCTTGTTTTTCTTTCACGCTCTCGCGTTAGA GTTTGAGTCTGCAGAGAATGCCGTTCTTAAAATATAATTGCTATGTACAG CAGGCAGTATAAATACCAGGCAATAATGCATATGTCGATTGATTTACCTA TGTACTAGCTGTTTAATACTTCTTCCAGGTTGACACAGAGCGCCCAACAG CAGGTGTTGTTCAGGACGGGTCGGGTGTCCATGACGCCGACTATCAGAAT AGCAGCTGCAGAGTGGCGGCCACCTGGCACGGCTTCTCCGACCTGCAGTC CTTCATACACCACTACACCTGCTGCTTCGGCACCGCACCTGGACGCGATG ACGTCTCTCCCTGTGAAGACGTTGGGCTGAGACTGTCCGCAGCAAGGGAC ATTCCGTGTACTTTGCAAAATGGTAAAAATGCAAATATTGGTAACTTGAC ATCAGTTAACAGTGGTTCAAATCACATTGCATCAACTAGAGACCTGACGT ATCTGTGTGGGTGGAGCCATGGCACTTTGCATTGCATGTCCCAGCCGCAA ATATGCCATTCTTGAACCCGGGCTACCCCAACTTGCCACTCAAATACTCT GCAGACACACCAAAACAAACAAACAAACTAACTAACAAACGGACTACAAA CAATATCTCTGGTTTCAAGATAATAAAACTTGAAGGTCTAAATGTTACGC GTTTTATGTTCTTGGCATTCCAGAGTTATCAAGATTTCGGCATTGATTAT TGTTATTATGAAGAATAATTTCACAACATAATGTCCTGCCATGTATCACC CCCAGGCACCAGGTACTACGCGACCGTGTACGCTGTGGACGCGTCCGGTC TGTGGTCTCCTTCAGCCATCTCTGATGGAGTCACAGTGGACACCACCGCC CCGGTACCCCTGGAGAAAGTCAGCTTCGGGAGGAACCTGCTACTTAACCC TTCTTTTGAAGATGTGCAGGTTAGCACATAACATCGTAACGGCAAAGTTC TGTACATGCTAACTTTAAGAACAAAGTGCAGTGGGGAATAGGGAGCTCCA CTTCATATATAAAGAGTACAATGTCATGTACATGTCAAAACGTAGGAAAT ACACTCATCAGTGATTTCGATACATTTCAATGTTAACAGGAGCTGTACCA TCACGTTTGTTGAACTTTCTTTCCACTGATGTACGTGTGCAACTGTAACG TTACATTTATGACTATTTTTACTCTTTGTTCCCTGAAACATAGACCGTAA ACGTTGGGCTGCCTGAGTCATGGTTAATATCAGGAATCGCCAACGTCTCG TCCCCGAGTCAAGCCATCAGCCAAGATGGAACAAGTTATCTCCTTCTTCT GGGGTCTGTCTCTCAGACTGTCTCGACAATTCCGGGGGACAAGTATCGCC TCAGCTTCCAGGCCTCACCAATTTTTCCTTCAAACACTCCTGTACTTTCT CAAGAGGGGTATGTCCAGGGCCCAGGCTTGCACCGCGTCTTCAAACTGTA CCAGCGCCCTTCTCATCTGGAGGGCACCCAGCTGCACCTGGACACAAACA TCACCTGGCACCATCACGTGTTCTACTTCACCGCCGTGCAGACTGTGTCG AATATTACCATTGGGTCAGCAGGAGTCTGGAACGGTGTTGCCCTGGACAA CGTGCAGGTGGGTAGTTGTGATTCGTCCTGTTATAACTTCTCACCAGCAA AAGGACGAGAGTCCGTTCTTGCATAGGTTCCAAATTAGGAATGCTCCCTT TCAGACTGGGATGACGCTGCAATAGATTACTTTTAGGCAGAGGTTTCTTT TGGAATATTTCAATTTTGTCCAGGTGTGATTTTGGAACAATACATTTTTT ATGGGGAGGTAGATGGGTGAAATTTGCCGTATTTGCTCGCAACTGTTGCC TTTCTAATTTCTTTCAAATTGCCATTGATATATCTATTTAGGCCCATTGT TCACCTTATACTACTTGTATACCATGTATATGAAGTCGTTTGAAGGTGTA CCTTAACCATTTGGGTACGTACTTTATTCACTGAACAGGTTCAGAAGCTG CAGCTCGGTCCGCAAAGCCCTTCTGCTGGTCCTGTTCGCCTGCACACCAG GTTCGTACACGGCTGGACCTCCGTGCACGCCGCCTGGGATTTTGTGGACC CCGAAAGCCCCATCATAGACTACAGCTGGGCAATCGGCACTGCAAGAGGT AAGCAACTTTCGACTGTACACCCAATGACACCAACCATATCTGTCGAACT TTATGGTATACATACTTGATAGACGTCGTGGTGAAGGCTCTGATCAACTG GAAATGGATGGATATATCGTAACTATAAAACAGAAAGGTAATACAGTAGC TACTCAAATGTGAACAAAACATACAACAGTTGAGCCGACTTGCCAGACAC TATTATGTGAACCTGGGCTACAATATGAGTTCAAATTTGCAAGAAGAGTA GCATTCCACAAACAGACAACAATTTGCATGTCTTGATATACAAACATAAT GGAATTTGGACCATTGTCATTTCTAGGTGGAACACAATTGCAGAGCTTCA GATCAGTCGGAAGAAACGCGCATGCCCAGAACAGTCACATCCGGCTGGAC CATGGCGCCTTCATCCACGTGACCGTGGTGGCAGAGACCGCGGCAGAGCT GCGGACAGTCGTGCACTCAGACCCGGTACTTGTGGACCTGACACCTCCAG TTATCTCGGACGTGAAGGTGATTTTACCAGCTTTACCGGACCTTTAGTAT TACTTTAATAGCCTGGATTCTCTGCCGATAAATGGACCCACATACTGGCG CAGATTAAAACATTTAAAAAGCATATGTTATTTCGTTTGCCATCAATGTA CAAAGTATTTTCGATCTTTATTCTTAATCAAAATGTTACCTAACAGCCCT ACACCTTTAGTTATCTCTTACAGTTCATGGACTAAGCATCGACCTTGTTT TCAAGGTGAGGGCTGTTGAAAGGTCGATATGGCAAAATGTATTTCATAGA ATGGCACCATTGGTAAACTTTGTCTGGTAGTCTTTTTAAATGGCACCATT GGTAAACTTTGTATATTTGTATATAATCACATAATGTTTTATGCGAGCAA ATGTGAAAATACTCGCCAATAGACCCCTTTCCAAATACCGCGGCCATTTT GAATCTAGCGCGAGCGCGCGTGGTTCGAGCGCGGGAAAGCGCGGGAAAAA TACACACCCGGTAAGTCCGAGCCAGCGGTGATGGCGTCCTCAATAGAAAG CAGCGTTGAGTCATCTTCGACGGCGAGATGTTCTCATCCTCGGTGAAATC CATCGATATATTTGCATGGCACAAGTAGATGATATTGTTGTGGACACTTG GACTCGATATCGGCCAGTAAAATTGTGAATTTCTGCTACTTTTCCACAGT TCCTACCGGGATGTTGAGCGCGCTACAGTTATATAATGCTAATATGTTTA CACCGCGTGCTTGTAGTTTCCCTAGTAATGTTAGCTTAGTCGAGAAAAAT CCCACAAAACATACACTTTTCGGGCTGGGATCCATATAGCTACGTTTAGG TATGAATATAACTCTTGATCCTTTTAGCTGTCGTGACAATGCCAACATCA TCTCGAAATTACGTTAGTTTGAGGGAGGGGCGTGTTTTCTGTGCAGCGTT ATCTTCGTTAACTTCGCTCAGCAATATCTTATATTCCCGCCAAATGAAAT CCTGCAAAACGTTAAAATATAGGCTTGAGTTCAATGTCCTTTTGGGTACA AATTTGGCAGCATTCCGGCGGCTTTTTGACGATCTTTTAGGATGCCAAGA ATTTAGTCTTGAGGACTCCAAGTACGTGAGTGAAGGTGTGTTTTCCACTG TATCTGACGTTTCTTTAAATCATTTTGCGCGGCAATATTTCAGATATCTG TTGCCCGGATGGAACCCGAAAAACGTTAAATAGTATTGACTTGAGGACTG AAGGACCTCATGCCGATATTTTTCCTTTTTTTGTGGGGTTTCATCCTGTG GAAATCTAAAATATTTCCGCGAAAAGTGATGTAATGAAACACGCCCCCTG CTTTCACTCACGAACTTCATCAAGCTAATCTTGGCACTAAAATATTGTCA AAGNCTAATATATAGTCAAAGGAGCCACCGAAGTTCCGTCAAATTTCTAT ACTCGCAAAGCCATCAAGCCCATATTTTCACGTTTCAGTGTAATATCATC CGACGGAAATTAAGATATTACGGCGCAAAGTGAAAACACTCCATCTTCAC TCACGTACTTTAGGTTTTGATATTTCAGAAAACTCGTCAAAAGAAGCCGC CGAAATTCTGCTAAATTCCTAACCAAACTGACCTTAAGCTCAAGCCTACA TTTTCACGTCTTTTTTTGTTGGATTGCATTCATCGGAAATGTCAAATATC GCCATGCGGAGAGATGTAACAAGAAAGAAATGAAAAGCTAGACAGAAAAG AAAGAAAGGCTGGACAGAACACACGACCCCCTCTCAACGCGCGTTTTCCC AGGCGAAGTTGGCATCGTCCAAAATTACGGTCACGACCGGTAAAATTCTG TATATTTCTATCTAAGTAGCTATAAGGATCCCAGCCCGAAAAGTGTATGT TTTGTGGGATTTTTCTCGACTTAAGCTAACATTATTAGGGAAACTACAAG CACGCGGTGTAAACATATTAGCATTCTATCACTGTAGCGCGCGCTCAACA TCCCGGCAGGAACTGTGGAAAAGTAGCAGAAATTCACAATTTTACTGGCC GATATCGAGTCCAAGTGTCCACAACAATATCATCTACTTGTGCCATGCAA ATATATCGATGGATTTCACCGAGGAGGAGAACATCTCGCCGCCGAAGATG ACTCAACGCTGNGCTAGTGCTCGGCTGGTATTCGGGATTGAGTCAGTAGT AAAATTAGAACCTTAACCACGCCAGAAACACTACTGACTTACTCCCAACT AGTTTCCAACCTACCCATAACTCACCCCAAGGCCGTAGACAAAACTCTGC TAACTAATTCTCAACCAAGTGACTACTATCGGAACGTGGGCGAATCACCC CCGACCTTCACACGACCAAAAACAAAGAAGAACACTAAAAGCAGTATTAA AGCTAGCCATGATCCGAATTCGATCTCTCGGTGATGTTAACAACATAATA GAATGGATTATTTTAATTAAAACCGAAAATGACCCCTCTTTTGAAAGTCG CTGAATATGTCCATTTAAATTCGTGAGAGGGTCTGCAATCGGTCGGGGTT TAGTCAGGAGAGATTCGGCAGTCTGCGGCTAGAGGTCGGGATGGTTGGGA GTAAGCTAGAAAGCATTCGGGGCCCATTCGGGAGTAATTCGTGTACTGGT TAGGAGATGATCGGCGCATCTTCGGCGCATGTTCGGCGCCAAAGATAGGC GTGGCCCAAAAACTGGTCAGAATGCTCCCGAACTACCGCCGACCTGAGTC GGCTAGCGTTCGGGAGCCATGTTCGGCTATGTGTAACCTAGGCTTCACCG GGTGTGTATTTTTCCCGCGCTTTCCCGAGCTCGAACCACGCGCGCTCGCG CTAGATTCAAAATGGCCGCGGTATTTGGAAAGGGGTCTATTCAGACTTGC CAGTCTGCGATGTGGTATTTGTCAATAAAGTTTCAAAGTTTCAAAGAATA AGCTGATCAAGGTTGTCCTAATTCATTGTAGGACGGAGGTCAGTTAGAGG ACTTGGACTACCAAAACACGTCCTTCATTTCACTTTACTGGGATGTGCGT GATGACGAGAGCGGGGTGGACTTTTGTGAATGGACAATCGGTATGTTCTT GCTTTCATATTTCTAGGTACCCCTTAGAAGAACACAACTCCACATGCATG CATGCACCAGGAGTTTTAGGACACCTTTTGATGTAATGTTGTCCCTTGAA AATTGTAGATAGTGACGCTTTTGCAATCCTTGCATCTTTTGTGTCTTTGT TGAGGAAAAAAGATTCAGTTGTTGAACTAACGATGGGTGTCTAACGAGAA ATCATGACACGATATTCAAACATTGCACGTGTGACCAGTGCATTATTGTA GAACAAGAAGGCAATTAACTAACTCCAATGTAGAATTTCACCGGAACGTA AGCGTATGAAGTCGTGTTCGCGTGTATTATGTTAATATCCCGTACACATA CAGATTCATATAGTTGTGTCCAAAGAGAGAATGCCTTTCTTTCTTTGCAA CGTTGACCAACGGAGACGGATCAAAGAGACTCGGCAGCTGCACTATTCGG ATACCAAGTCATATACGGTTTGTGCATTATGCACATACATCCTTGGTACG TACGCGTGCATTCTTATGTAAGGGCCCTGTCACACTTGCGCGTATATGCA AGTCCGCATGAGTTGCGTATTAACAAGTTTTTGTTTAAGGCTAAGTCTGC GGCCGAAGAAGTCATTTCTTTGGTTCGATAACTAGGCTGCACAACGGTGG GTCAAAGGTAGAAAAAACTTCTTTCCTGCAAACTTTACATAAACCCAAAA AAATGTGTTCATACGCAACTCACACGCACTTGAATATACGCACAAGTGTG ACAGGGTCTTTATGTTATGTGACGTTACAGGACTGTCGCCTGGATCCGGG GAGCTCCAGCCTTTTGTACGCTTGCCGTCTACTCTACACGCCGTGTCCGA CCTGGGTGGTAACGTGACCCATGGACAGACGGTATACCCAACGGTCCGCT GCACCAACCAGGCCGGGGTGACGTCTCACGTCACGTCAGACGGTGTCACC ATTGAACTCCAACCGCCTGAAAGGTGTGTCATCGTCAATGAAGCAGCGTT AGTCAATTCTACAATAGCACTTGTGAGAACTTGAGGGGCATTTCTTTTGT TATCAAGTATTGAGAATATGATTTTCTTGAGTTGAGCGACGTCCCAAGGC AGATTACATTTTCAAACCGGCGCAAGGGCAAGACGTTTGTGGGGTTGAAA CTTATTCTGATATAAAATACAATGAAATACAAAAACACGAAAAACACTTT TGAAAATAGTCATGAGCATAACTTTGAATGTATTAAGTTTTTTATATACA CTTTTATTCTTCGTTCCCGCAAACATCCCGACCGGGCCCCAGTTTGGACA TATGGTCCTAGCATTACAGGGCAACCTTTGGCTATCGTACTTTGTATGTT ATTCGTGTATTCATGTTGCATTCCGTTCTTATCTTAAAGTGACCGCGCCA TAGTTGAGACGGTGACGGGTTCTTCATCTTACTACCCGATCCGAGGTCAG CATCAGGCCGCTACTGATGTCGTCCACGTGACCTGGTCCGGCTTCTTCGA TGAGTCTGGTATTCACCACTATCAGGTAAGGTGTTATTGCGATATTTTGC TTCACAAGGTTTTGGGGCCCGTACGAAATCTCTATCACAATGATATTCCT TCCATCACAACGCAGCAGCATAGAATGAAAATAGGAAAATTATCCACAAC AACGATGACAGGCACATTTATCACAGTTTTTCATCTTAAAGAAGCTACAT TTATCACCGAGTATGGCATACCTATACTGTAATACAGGCTTATAAGAAGG GAGTACCACCTTCAGCCTAGTTTTGGTGCAGATGCTGGAACGGTCACGGG AAACTAAAAATGGCGGTCAAATTAGAAAGAGTTCTGTTGGGACGTTGTCA GTTAGTCACCTAGATGCACGATTGTCTAATCTGTACAGAGGAGATATGGT ATGCTCTACAAAGACATCAAACCCCTTATTTCTTAAATTTCCGTTGCTGA ACACAATTTGTGCACAAAAAACACGTTCGAATTCCATCGTCTTTATGTGG TGGCGTATCAATGGGCTCATTGGGGACGACAATATTTAACTAATTTGAGT GGTGACTTATAGGACAGCTCTCTTTCCAGGTCCGGATGTTAAGCCGGGAT CTACCCGACTTCCCGTGGACAGATGTGGGTCTGAACGGCCAGACCCACGT CACCCTGTCGGGACTCCATCTCCGCTCCTACAACAGGTACCAGGTACAGG TCAGAGCTGTCAATCATGTGGGCGTGGTCAGTGACGTAGCCTTCTCAGAA GTCGTCATCGAGACAGAGAAGCCACACGTGGTTGGTAAGTAATCTACTGT TGATAAGACGGAAGTGCGCTACATTCAACTGATGATGCTCTTTCTGTAAA ATAAGGTATGAACCAAAGAAGTACAGGCCCAGCGCCACAAAGCCTGTGTT ACTCAATGCATATTGGCTGATTGGCCCCCTACCCCAACAGCTTATGCTCG TTGACCTCTTAGCCAGGAAAATGATTAAGAAGATTAGAAGTACCAAAAGG AGCTCAGAATCCTTTATCATTATGAAAATCAGTTTAATATCATCAGATCA TAAACCAGTCATCACGACTTCCAACACACGATGGTAACAGTTATAAGTCA GGCAATATTTGGTCCACCGTGACCAAATATGCACGTCTCAACAGAATACG AATGTTCCCAAATTCTCCTGACTTAAACATGTTGGCCATCAAGCTTTGAG GGCCTGACTAGTGGAAGCATGATTAAGTCAGGCTAAGATCTAGAGCCACC CAATACGTCGTACCTAGAAATGACTCTGAAAAGGAAGATGTTGACCAATA GTACAAATGCTGTAATTTTGAATGTACGTATAAGAATGAACCCATCTCAC TTTCCATGCTGCAATAGAAGTCATTCTTTCATGTATATCACAAATACTGG GCTAAGTACTGAATCATATATTCAGTAGGTCCCACTTTCCGGAGCTGGTG GCCTCAGCCGTCGGTGCTGCAGTTCGACTGGACGGGCGTCTTCGCCAGCA ACTCCTCCCTGGTGTACGAGGTGTCAGTCGGAACCCACCCCGGCGGATGT GACGTGTTGAAGTGGGTGGAAACGGAAATGACTGAGATGAGCATGAACAA TGTCGATAACAACAAGGAACACTTCGTTGTCATCACGGCCATCAACCAAG CTGGACTGTACTTGGGCGAAAACTTTGCTCTGTCATATCCTGCAAACGGT TAAATGCCCGTGTATAGGTTGCTATCGTGCTTTTTTGTCAAAGTCAAAGT AGAGCAATTCAACGTTTGTAGTGGTATATCTTATTGGTTATCTCACTAAG TCATGAATGTTGTGGCATGGCCTACAAATGTATGGAGTGACTATATGACT AGCATTTGCATATTTTTTTGCCATCCACCGAAAGCAAGGTACTCCTGGAC TTACATATTTTCTCTATTGTATTTGCTATTGCCTGTCACAATTAGATTTT CCTCTTCCGGAATTACTATTTGATAAAACATTCTCACTGAATGTTATATA ATTGTCAAATGCTGAGGTCACCGTATGTGTCTTGTTGAATACAATGTATA AGACATAGGCGAACAAATGTACTCAATTATGTAAAAAATAGACGCTGTGT AACCAATTTGTGTTGTCGATTAAACCGGAATACTTTTACCATGAAGAAAA G

Coding sequence (CDS) from alignment at Sc0000207:295716..306816-

>transcript:BL97317_cuf1 ID=transcript:BL97317_cuf1|Name=transcript:BL97317_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2532bp|location=Sequence derived from alignment at Sc0000207:295716..306816- (Branchiostoma lanceolatum)
GTTCTTCTCCAGCCGGAGATCAAGTATGTGTTTCACGTGCGGGCCTGGTA
CGGTAGTCATGAGTACCTGGACTTCCAATCGAACGGGATCCTCACAGACT
TCACTCCACCCGCTGTGTCAAAGTCAAGGAAGGTAAATGACCTGTCGGAC
GTCGGCCATGTAGTTGACGTTGACTTCATTAACAGTACGTCACAGCTGGG
GGTGGGATGGAGGAACGTCTTCATAGACCAGGAAGTGGGAGTGGCATATT
TCCTGGTCTCTCTCAGCACTTTTCCCGGAGGAGAAGACATCATTCCGTTC
AGTCGCTTCAATCTGTCTTCCACTACGGACGAGATCCTGCTACACGACCT
TACACTTGAACCCGACATCAAGTACTACAGTAACGTCAGGGCTTTCAACC
GTGCGGGGATGCATACAACTGTCAGCTCCGATGGGGTTTTGGTTGACACA
GAGCGCCCAACAGCAGGTGTTGTTCAGGACGGGTCGGGTGTCCATGACGC
CGACTATCAGAATAGCAGCTGCAGAGTGGCGGCCACCTGGCACGGCTTCT
CCGACCTGCAGTCCTTCATACACCACTACACCTGCTGCTTCGGCACCGCA
CCTGGACGCGATGACGTCTCTCCCTGTGAAGACGTTGGGCTGAGACTGTC
CGCAGCAAGGGACATTCCGTGTACTTTGCAAAATGGCACCAGGTACTACG
CGACCGTGTACGCTGTGGACGCGTCCGGTCTGTGGTCTCCTTCAGCCATC
TCTGATGGAGTCACAGTGGACACCACCGCCCCGGTACCCCTGGAGAAAGT
CAGCTTCGGGAGGAACCTGCTACTTAACCCTTCTTTTGAAGATGTGCAGA
CCGTAAACGTTGGGCTGCCTGAGTCATGGTTAATATCAGGAATCGCCAAC
GTCTCGTCCCCGAGTCAAGCCATCAGCCAAGATGGAACAAGTTATCTCCT
TCTTCTGGGGTCTGTCTCTCAGACTGTCTCGACAATTCCGGGGGACAAGT
ATCGCCTCAGCTTCCAGGCCTCACCAATTTTTCCTTCAAACACTCCTGTA
CTTTCTCAAGAGGGGTATGTCCAGGGCCCAGGCTTGCACCGCGTCTTCAA
ACTGTACCAGCGCCCTTCTCATCTGGAGGGCACCCAGCTGCACCTGGACA
CAAACATCACCTGGCACCATCACGTGTTCTACTTCACCGCCGTGCAGACT
GTGTCGAATATTACCATTGGGTCAGCAGGAGTCTGGAACGGTGTTGCCCT
GGACAACGTGCAGGTTCAGAAGCTGCAGCTCGGTCCGCAAAGCCCTTCTG
CTGGTCCTGTTCGCCTGCACACCAGGTTCGTACACGGCTGGACCTCCGTG
CACGCCGCCTGGGATTTTGTGGACCCCGAAAGCCCCATCATAGACTACAG
CTGGGCAATCGGCACTGCAAGAGGTGGAACACAATTGCAGAGCTTCAGAT
CAGTCGGAAGAAACGCGCATGCCCAGAACAGTCACATCCGGCTGGACCAT
GGCGCCTTCATCCACGTGACCGTGGTGGCAGAGACCGCGGCAGAGCTGCG
GACAGTCGTGCACTCAGACCCGGTACTTGTGGACCTGACACCTCCAGTTA
TCTCGGACGTGAAGGACGGAGGTCAGTTAGAGGACTTGGACTACCAAAAC
ACGTCCTTCATTTCACTTTACTGGGATGTGCGTGATGACGAGAGCGGGGT
GGACTTTTGTGAATGGACAATCGGACTGTCGCCTGGATCCGGGGAGCTCC
AGCCTTTTGTACGCTTGCCGTCTACTCTACACGCCGTGTCCGACCTGGGT
GGTAACGTGACCCATGGACAGACGGTATACCCAACGGTCCGCTGCACCAA
CCAGGCCGGGGTGACGTCTCACGTCACGTCAGACGGTGTCACCATTGAAC
TCCAACCGCCTGAAAGTGACCGCGCCATAGTTGAGACGGTGACGGGTTCT
TCATCTTACTACCCGATCCGAGGTCAGCATCAGGCCGCTACTGATGTCGT
CCACGTGACCTGGTCCGGCTTCTTCGATGAGTCTGGTATTCACCACTATC
AGGTCCGGATGTTAAGCCGGGATCTACCCGACTTCCCGTGGACAGATGTG
GGTCTGAACGGCCAGACCCACGTCACCCTGTCGGGACTCCATCTCCGCTC
CTACAACAGGTACCAGGTACAGGTCAGAGCTGTCAATCATGTGGGCGTGG
TCAGTGACGTAGCCTTCTCAGAAGTCGTCATCGAGACAGAGAAGCCACAC
GTGGTTGGTCCCACTTTCCGGAGCTGGTGGCCTCAGCCGTCGGTGCTGCA
GTTCGACTGGACGGGCGTCTTCGCCAGCAACTCCTCCCTGGTGTACGAGG
TGTCAGTCGGAACCCACCCCGGCGGATGTGACGTGTTGAAGTGGGTGGAA
ACGGAAATGACTGAGATGAGCATGAACAATGTCGATAACAACAAGGAACA
CTTCGTTGTCATCACGGCCATCAACCAAGCTGGACTGTACTTGGGCGAAA
ACTTTGCTCTGTCATATCCTGCAAACGGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL97317gene:BL97317Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL97317_cuf1transcript:BL97317_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL97317_cuf1-E1BL97317_cuf1-E1-1564476830-388314Branchiostoma lanceolatumexon
BL97317_cuf1-E2BL97317_cuf1-E2-1564476830-388311Branchiostoma lanceolatumexon
BL97317_cuf1-E3BL97317_cuf1-E3-1564476830-388309Branchiostoma lanceolatumexon
BL97317_cuf1-E4BL97317_cuf1-E4-1564476830-388307Branchiostoma lanceolatumexon
BL97317_cuf1-E5BL97317_cuf1-E5-1564476830-388305Branchiostoma lanceolatumexon
BL97317_cuf1-E6BL97317_cuf1-E6-1564476830-388303Branchiostoma lanceolatumexon
BL97317_cuf1-E7BL97317_cuf1-E7-1564476830-388301Branchiostoma lanceolatumexon
BL97317_cuf1-E8BL97317_cuf1-E8-1564476830-388299Branchiostoma lanceolatumexon
BL97317_cuf1-E9BL97317_cuf1-E9-1564476830-388297Branchiostoma lanceolatumexon
BL97317_cuf1-E10BL97317_cuf1-E10-1564476830-388295Branchiostoma lanceolatumexon
BL97317_cuf1-E11BL97317_cuf1-E11-1564476830-388293Branchiostoma lanceolatumexon
BL97317_cuf1-E12BL97317_cuf1-E12-1564476830-388291Branchiostoma lanceolatumexon
BL97317_cuf1-E13BL97317_cuf1-E13-1564476830-388289Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000207genomeSc0000207:295716..306816 -
Properties
Property NameValue
Transcript idBL97317_cuf1
Biotypeprotein_coding