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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97325_cuf0 >transcript:BL97325_cuf0-protein ID=transcript:BL97325_cuf0-protein|Name=transcript:BL97325_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=580bp
VGVDDDGVFLDMPLLEFKFITSLGSRAIGSSTGVILDNGATLRAGRDGAL
VSARVHDEAWSEAHIGILGLNYDFFRLRACLKLSISYDLDILKAFGYNDP
KEFAAFFDRIIGHFVGLLNLVKDLYEFVTTNNLDDLFSAVNLRVQKVMEV
LGTVRSARAAALNSIGVLDDAQLAIDPDVATIATSVRKSVDLTSEAIREF
SAFYKVATDIGGVTLPMAIRHIDEGIRLISETSANYFQSPKTAMKDVEKA
VYKIQRAMEVIVEARAVLMGAAFRNGERPFWSSIIENADILTDELTVAAQ
LMSKHSRGTTTNTLSESARDMATAFQELNALSSALETTFESLDSKVAKLK
EGCNDLEKGYLSAKSKMDEVFGPKVDDGFPRQQLRPGRSRRTSRSCPKTM
GYFPSNSNGRYTFDGIDLEIEARNTLVAPFSGKVFKPIGSSGQVTIIADE
LHGVHVVIDNVDLFDNMENKTVYKGERLGRVRSSHCQPNSIHLAMVNISR
EAMFAIDPTPYLEQKEMPTPRLDQQCGDFLLRLLGLNILALDLDVTMSGI
EDTSPARFIPTDLTESIRSLSDMVGSRREG Run BLAST on NCBI mRNA from alignment at Sc0000207:377909..383211+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97325_cuf0 ID=transcript:BL97325_cuf0|Name=transcript:BL97325_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5303bp|location=Sequence derived from alignment at Sc0000207:377909..383211+ (Branchiostoma lanceolatum)
GTTGGGGTTGACGATGACGGGGTATTTCTTGACATGCCCCTTCTTGAGTT
TAAGTTTATTACCTCCTTGGGATCACGAGCTATCGGCTCATCCACTGGCG
TCATCTTGGATAATGGCGCAACCCTGAGAGCAGGTAAGTCCTGTGAAATG
GATTTTGTTGTGATCTTTGTTGCATGTTCCTGTCCTAAAGGTTGAACTAC
AGTAAGTTATATAACGGGAACTAAAACGCATATGCTGACATTTGACAGAA
GCTTCAGTAGGTTGGTATGCTATTTGAAAAAAAAGCCTGTTCAACGCAAC
GCAACGACGTGTACAGTCAATATCTTCAACGACTCTGTTACAGACATCAT
ACAGGTTTCATTTGGTGTAATACATTACAGGTCGTGACGGTGCTCTTGTG
TCAGCAAGGGTACATGACGAAGCCTGGTCAGAGGCGCACATCGGAATACT
TGGGTTGAACTACGACTTTTTCCGACTCAGGGCGTGTCTTAAACTGAGCA
TATCATACGACCTCGACATCCTCAAGGTACATCATAACATGCCACGTTCC
CATGTGTAAACTTATGAAAAAAATATATGGGAAGTTATAACTTAATATCT
TTATGCCATAAATGTGTAAAATTGATTTATCGCCTAGACTTGGTAACTAC
ACGGAGCATTTCTCGCATGGGGTATCAAAAGGAAAGGAACCAATGCACAG
CCGCAAGGTGCCCGAATGTAAAATATATATTGTTTGTAGATCTACATATA
TAGCACCATTAGTGTCTCTTAATTTGTTTGCTTTATTACCATGTGACAGT
TAATTTGCCTCCCTCTGCTTCTAGGCATTTGGATACAATGATCCCAAGGA
GTTTGCAGCCTTCTTTGATAGAATTATTGGCCACTTCGTAGGGCTTCTAA
ACTTGGTAAAAGATCTATATGAGTTTGTCACCACGAACAACTTGGACGAT
CTTTTCTCTGCTGTCAACCTTCGTGTGCAAAAAGTGATGGAGGTCTTGGG
AACTGTAAGATCAGCTCGCGCAGCTGCTCTTAACTCCATAGGAGTCCTAG
ACGACGCCCAACTCGCGATAGACCCAGATGTGGCAACGATCGCTACCAGT
GTGAGGAAGTCGGTAGACCTTACGAGTGAGGCGATTCGTGAATTCTCTGC
TTTCTACAAGGTTAATAAATCTACTGTTTTGAGCACTGGAAATCATTTTA
CGTGTTTACTTCGCCACACTTTGATCATTTAAAAGCACATGCAGAGCTTT
CTTGACGACATCGGCTGTGCCAACCGGTTATATATATGCTTTACCATGCG
TTTGGTGTGGCAAAGTCTTGAATACGTATATTCAAAATTATAGGTATCAT
TTTCGTCGTGTTGATGAGTTCTTGATTTACATGCATATGTTAAAAAAGGG
TGTATTGTATTCTGTGTCGTATTGGATTGCATAACTGTCAGAGGACAGCA
ACATTCCGATTTTTCATTTGGTCAATGATGTAAAATCATAAAACGTTGTT
TTACCAGGTTGCTACAGATATCGGCGGCGTTACTCTTCCAATGGCAATCA
GACATATTGATGAGGGAATCCGGCTCATATCAGAGACAAGTGCCAACTAT
TTCCAGTCCCCTAAGACTGCAATGAAAGATGTCGAGAAGGCTGTGTACAA
GTAAGTGTTCAAGTCGTAAATCACATTTTCGGCAGTAATTATTCTCGATC
ATAGAGCAATGTTTAGAGAGCATTCGATGTTCACCGGTACCGAGCCCCAT
TAAAAGGGATACGGTAGAGTTTCAAATGAAAAGCACCTAAAATTGGGCAT
TGAATAGATACGATCGAAGCCGGTCGACTGTGTAACAGGGGTTTGACGAA
CCTCATTGGCATCACCACATCGGTGTTCCTTATTGTTACAGGATACAGCG
TGCCATGGAAGTGATAGTCGAGGCCCGTGCCGTATTGATGGGCGCTGCCT
TCAGAAATGGTGAGAATCGGTCTTGCATTAATTGGACATTGGAAGGTCAG
CCTCATGCAGCGCGTTGTAAGGACCGCTATCCACTGCTCAGGCTATTCTC
CGATATTCCCAGCCGTTTAAAACCATGGCAAACATAGCCGACCATGACGC
GGAGTGAAGAAGCAGGCGTGGAAGAGTAGCCAATAGCTATATTGTGCCTA
CAGCCCCGACCCACCACCAACATAGGCTCGGGAATCGTTAGAAGAAAAGT
CGCAGGAAGGTCCTGAATGTGTAGATGGGCCATACGCGCGCGGGAGATCA
CATAGAAAACATTTGTTTATTTGTTTTCAGGTGAGAGGCCGTTTTGGTCC
AGCATCATTGAAAATGCTGACATCCTGACAGATGAACTAACCGTCGCCGC
GCAACTCATGTCGGTAAGCTCCTCAACAAATTTGGATATGTCGAATATGT
CAACAGAAGTCGACATAAACTAAAACTATTTTTTTATCATGTAGATAACA
GTACGTTTATGTGATGGAAACAATGTTTAAGTCCAAGATTTCTTTCAAAC
AAAGCGTACTGCTAAACGTTGTGTGTTCTTATGTGTTTTTTTTACTCTTT
AACATAGAAACACAGTCGTGGGACTACAACTAACACCCTTTCAGAGTCTG
CCCGAGACATGGCGACTGCATTTCAGGAACTGAATGCGCTTTCCAGTGCT
TTAGAGACAACATTTGAATCCTTGGACAGCAAAGTTGCGAAGCTGAAAGA
AGGCTGCAATGACCTTGAAAAAGGGTGCGTTTTCATAACAATTATTAACG
CTGAAAATATAAGATTATCATAAATGTGTGATTATCATATTGTTACCGTA
TGTGATAACGTCACATTAGCACAGTTAAAAATAAATAAAATTGTATGACT
CTTTAAGAAGAAGGAATGAATTGACATTTTTGGATTGTCATAACTAGTAT
ACCACGAAAAAAGAAATTGTGATGGTTTGGTACTGAAATGCGATAGTCGG
ATAGTCCTGTAAATATTCGAAATGCATAGACATGAATACAGGGTATTTGA
AGTTGAAATCACAATACAATCGTCCGCACGACTGGTCACATTGCTCAAGT
GGTAACTGTCCGTATCATTCGTTTTGACCCCGTTTTACAGATATCTGTCA
GCAAAATCTAAGATGGATGAAGTTTTCGGGCCAAAGGTAGACGATGGGTT
TCCCCGGCAACAGCTACGTCCTGGTCGTAGTCGGCGAACGAGTCGTTCCT
GTCCAAAAACAATGGGATACTTCCCCAGTAATAGCAATGGGAGGTATACA
TTCGATGGGATTGACCTTGAGATTGAAGCTCGAAACACAGTAAGATGTCA
AAACACTGTCACTGTTGTTTGATTTTAGAGTATCTTTGCTACCATTTTTG
GAACATACAATCAGCTTTACTGGATCATTTGAGTAATTGAAGGCTGATGC
TAAATTGTTGACGATGAATGTCAAAATAAGGTCTTTTTTCAATTTCAGCT
TGTAGCTCCATTTAGCGGGAAAGTTTTTAAGCCTATAGGAAGCAGTGGTC
AAGTCACCATCATCGCTGATGAATTACACGGCGTCCATGTTGTCATTGAC
AATGTTGATCTGTTCGATAATATGGAAAATAAGACGGTAAGTGATTACTT
TTCTTTGAAAATGCAAGATACTGTTATGATCAAACACACTATGGCATTCA
CCATGGAATATGCAAATCACTAACTAATGGGATGATTTGTGCGTAATAAG
TTGCATTCATATGTCACGATTGATCTTTTCATTTACCATAGTATCTCATT
TATGTGCATATCTTTCATCATTACGTAATATGTCTTCATGACGAAGTTCT
CATCATTTAGCATGTGTTTCCCCTGTCATTGTGCAAGCTATCTGCTAATT
ATTTAATTGCATAATCGGCGGTTGTTTCATGTAAGACATCACGAAATATT
TTACAACTGCAGCTGGGCGTGCGGGACAGGGTCAGGGGCTTCACCGGAGC
GGTGTTTATGTTTGGAATGACGGTGAGGGGTCCGACACGACTGAGCTTGC
CGGCGATTTCGTGATGTTTTACATGAAGCACCGCCTCATATTCATCCTCA
TTCGTGTTTCAACTACCATACTGTTCATTCTATATTTCTGCGAACTTGTC
TTCTGATTGTCCAGCAATTACTCTTTGAAATCCAAAGGCCAATGAAACCA
CCCTTGCAGGTAAAACTCATCAGTACTGAGGCAAACGAACAATATGAAGT
TTCCAGCTGACCGTGTCAGTACAAAACAACAATTATGATAACAGCGTCGG
ATTTAGAAAAAAAAACGCCCTTTTATCACCATGTAGGTATATAAGGGGGA
GCGTCTTGGCCGCGTTCGATCGTCCCATTGCCAGCCCAACAGCATCCACT
TGGCAATGGTGAACATCTCGAGAGAGGCAATGTTTGCCATAGACCCTACA
CCGTACCTGGAGCAAAAAGAGATGCCAACTCCACGACTGGATCAGCAGTG
CGGAGACTTTCTCCTAAGGCTATTGGTACAGTCATAGCTTTACTATCAAG
CCATCATATACTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT
CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAATAATAT
CTATCTAATAATATCTATCTATCTATCTATCTATCTATCTATCCATCTAT
CTATCTATCTATCTATCTATGGAGACAAATGGAGACAAATCGAGATAGAT
AGCGATAGATAGCGATAGATAGCGATAGATAGCGATAGATTGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTCCAACGGGGAAA
ACTTCTCGCTTCCCACAGGGAATATTTTTTAAAGCTAATTAATTTCGTTA
AGCACAAAGTGAATGCCAGTTGATTCAAAGTGGTTATTGAAGAGTGAGGT
TCTGTTTTTTAACAGGGCTTAAACATATTGGCTCTTGACCTCGACGTCAC
TATGTCAGGTATCGAGGATACGTCCCCTGCTCGCTTCATCCCAACAGACC
TAACAGAAAGCATACGGTCGCTTTCTGATATGGTCGGGAGCCGCAGGGAA
GGG Coding sequence (CDS) from alignment at Sc0000207:377909..383211+ >transcript:BL97325_cuf0 ID=transcript:BL97325_cuf0|Name=transcript:BL97325_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1740bp|location=Sequence derived from alignment at Sc0000207:377909..383211+ (Branchiostoma lanceolatum)
GTTGGGGTTGACGATGACGGGGTATTTCTTGACATGCCCCTTCTTGAGTT
TAAGTTTATTACCTCCTTGGGATCACGAGCTATCGGCTCATCCACTGGCG
TCATCTTGGATAATGGCGCAACCCTGAGAGCAGGTCGTGACGGTGCTCTT
GTGTCAGCAAGGGTACATGACGAAGCCTGGTCAGAGGCGCACATCGGAAT
ACTTGGGTTGAACTACGACTTTTTCCGACTCAGGGCGTGTCTTAAACTGA
GCATATCATACGACCTCGACATCCTCAAGGCATTTGGATACAATGATCCC
AAGGAGTTTGCAGCCTTCTTTGATAGAATTATTGGCCACTTCGTAGGGCT
TCTAAACTTGGTAAAAGATCTATATGAGTTTGTCACCACGAACAACTTGG
ACGATCTTTTCTCTGCTGTCAACCTTCGTGTGCAAAAAGTGATGGAGGTC
TTGGGAACTGTAAGATCAGCTCGCGCAGCTGCTCTTAACTCCATAGGAGT
CCTAGACGACGCCCAACTCGCGATAGACCCAGATGTGGCAACGATCGCTA
CCAGTGTGAGGAAGTCGGTAGACCTTACGAGTGAGGCGATTCGTGAATTC
TCTGCTTTCTACAAGGTTGCTACAGATATCGGCGGCGTTACTCTTCCAAT
GGCAATCAGACATATTGATGAGGGAATCCGGCTCATATCAGAGACAAGTG
CCAACTATTTCCAGTCCCCTAAGACTGCAATGAAAGATGTCGAGAAGGCT
GTGTACAAGATACAGCGTGCCATGGAAGTGATAGTCGAGGCCCGTGCCGT
ATTGATGGGCGCTGCCTTCAGAAATGGTGAGAGGCCGTTTTGGTCCAGCA
TCATTGAAAATGCTGACATCCTGACAGATGAACTAACCGTCGCCGCGCAA
CTCATGTCGAAACACAGTCGTGGGACTACAACTAACACCCTTTCAGAGTC
TGCCCGAGACATGGCGACTGCATTTCAGGAACTGAATGCGCTTTCCAGTG
CTTTAGAGACAACATTTGAATCCTTGGACAGCAAAGTTGCGAAGCTGAAA
GAAGGCTGCAATGACCTTGAAAAAGGATATCTGTCAGCAAAATCTAAGAT
GGATGAAGTTTTCGGGCCAAAGGTAGACGATGGGTTTCCCCGGCAACAGC
TACGTCCTGGTCGTAGTCGGCGAACGAGTCGTTCCTGTCCAAAAACAATG
GGATACTTCCCCAGTAATAGCAATGGGAGGTATACATTCGATGGGATTGA
CCTTGAGATTGAAGCTCGAAACACACTTGTAGCTCCATTTAGCGGGAAAG
TTTTTAAGCCTATAGGAAGCAGTGGTCAAGTCACCATCATCGCTGATGAA
TTACACGGCGTCCATGTTGTCATTGACAATGTTGATCTGTTCGATAATAT
GGAAAATAAGACGGTATATAAGGGGGAGCGTCTTGGCCGCGTTCGATCGT
CCCATTGCCAGCCCAACAGCATCCACTTGGCAATGGTGAACATCTCGAGA
GAGGCAATGTTTGCCATAGACCCTACACCGTACCTGGAGCAAAAAGAGAT
GCCAACTCCACGACTGGATCAGCAGTGCGGAGACTTTCTCCTAAGGCTAT
TGGGCTTAAACATATTGGCTCTTGACCTCGACGTCACTATGTCAGGTATC
GAGGATACGTCCCCTGCTCGCTTCATCCCAACAGACCTAACAGAAAGCAT
ACGGTCGCTTTCTGATATGGTCGGGAGCCGCAGGGAAGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000207 | genome | Sc0000207:377909..383211 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97325_cuf0 |
| Biotype | protein_coding |
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