transcript:BL97327_cuf2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL97327_cuf2
Unique Nametranscript:BL97327_cuf2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL97327_cuf2

>transcript:BL97327_cuf2-protein ID=transcript:BL97327_cuf2-protein|Name=transcript:BL97327_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=1213bp
SLDTTGPPVTTANPLDNFAEGKKGRLNSRPHQTNRFVIPEDCAKLCLTFP
TTKCLGFNYDYGSVGTCEILEELEVPGVHLHQTGHFHHYERRGVGKMLEF
DFDSLSLRHDNLYYFNVYLQNSLGYTSILTSRGIMVDHTPPSPGLISDRR
WDQVYGEVCEDFIPDEWEHKCVQQTALPNHRAIVDGEGSRTVFNGHEPLE
DMLYTRANTYVSANWDGFHDNETGIFGYTWTVGTTPCQEDIHPHKDPHSH
VFDESEWTHTGIADGLDLPDGTYHVTVRAINKVEFGGPMATTVCHSTPYT
IDNTQPFVHSVTNVNYDDDAQLISAEYNVSDPLSKIREVDLGLGRSKRDV
YLMDWHRDDNTTHITHNYHIPDGVPAWVKIRAINNVDLRKAGHADSPILV
DTSPPTAGSVFDGPTAGHDINFQNDQTEICANWRDFHDEESGIDYYLWGV
GTFAGAEDIVPLEVISHSSFRGCIQLSTPLLHNKTYYSTLIALNGGHKHL
NISVSSDGVLVDTTPPTMGWIKDGIDKVADMQFSSEQSSVSANWAGFSDP
ESGIASYSVSVTRRHAIKGNDTSDWEVIHPPEEVDSNTDHINWHHFHLHH
GDTVAVQLTAINKAGSHVTVESDGFVVDTTPPVLHFLGDGPTAGMNKKFS
SSLSFLSANWVFEDKESDLDHFKISVFETHGGRKHTLYLGDSKEEIIPGS
MVNWTSPQLNLRPGRHYSIRVTAVNHAGLSSVHDTDGVVLDTTQPSMVKV
RVGVLASDVEEVLDGFVWQTDRKGILANWLASDGQSGIEAYWIAIGSYPG
GSDLSELRSMGPAIDGYIGGIDLQLTDLNTNTPVYYVTVLAENGAGLLSQ
NLTSRPIKVVPGDIPGVVFDGPLTVSNETHTNPVDVDFQRDNTAVTVQFE
GFQSVLNGLAHFEWAIGTSPRLDDIQPFSAAGIVLTQDRQHPGYGLHGSG
HAQALVPLQAGTTYYATVRGVTGRGDVLETSSDGITVDRSPPVTQIVDIG
CDVSNESLGSAENCYQTSSDYLEGEWVTADNESVVAYSAFFYGTAPGLSD
ITQLTSGTDENSVPSTLVVPVSDGRPNFLNVLATNEVGLKSVATSNGIIV
DDTPPDVGIVTCSRYVQPRVPIACTWSGFHDKESDISHYIFGLGTDEGDD
SIYNFTPVSADLSSTDELPKGVNLEHGGTYYATLSAVNGVGLQAKAFSEP
ITVDMTPPMPGIV
Run BLAST on NCBI

mRNA from alignment at Sc0000207:389895..400943+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL97327_cuf2 ID=transcript:BL97327_cuf2|Name=transcript:BL97327_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=11049bp|location=Sequence derived from alignment at Sc0000207:389895..400943+ (Branchiostoma lanceolatum)
TGTCACTGGATACAACAGGCCCTCCTGTTACCACTGCAAACCCACTGGAC AACTTTGCAGAAGGAAAGAAAGGACGACTGAACTCAAGGCCACACCAGAC AAACCGCTTTGTCATTCCAGAGGACTGTGCAAAACTTTGTCTAACCTTTC CTACTACTAAGTGTCTCGGTTTCAACTACGACTACGGATCCGTTGGAACT TGTGAGATATTGGAAGAACTTGAAGTTCCTGGAGTTCATCTGCACCAGGT GATTGTTTACGGCTTGGTTATGTTCACATTGAGTAGCCGACTGGGACATG ATGCCTTTGATCAGATAAGTGTAATCAAATTAATTTTAAGGCCATGGTGA CGACATCTATCAGTTAATCTGTGCAAAGTTTAATGGTCTATTTTTATCAC TTGAACTGTGCCGCTTCGAATGACAAAATAGTCACATGATGGATGCATTC TTTGTGAGAAAGTGACACGATTACTATGAAATGTTGTTTTTCTTTCAATA CAGACTGGACATTTTCATCATTATGAACGACGTGGGGTCGGTAAAATGCT GGAGTTTGACTTTGACAGCCTGTCGCTGAGACATGACAATCTCTACTACT TCAATGTGTATCTGCAAAACTCTCTAGGTATCCACTATCCATTCATTAGA ATTATCATTGGATTTGATTGGATTTATTGGAATTGCAACAGTGCAATACA CGTAGGACACAGGCAGTTACGTGTATTGAAAATTATTATAATAACAATGG TACCATTACTAACTCAAAACTCATGTCCAGTATTGTGAGCCTTATCAATC ATAATAATGCCGTTTCAGGATATACGAGTATCCTGACATCAAGAGGCATA ATGGTTGACCACACTCCCCCCTCGCCTGGCCTGATTAGCGACAGAAGATG GGACCAGGTTTATGGAGAAGTTTGTGAAGACTTCATCCCAGACGAGTGGG AACACAAATGTGTTCAACAGACAGCACTTCCAAACCACAGGTAGTTGTAA AAGTGGTCGTGCGACTTATTGATATACATTTTGTTGATATGATATCAGTC TCATGATGTAGCTCGGCACACATTTATGTAGCATTCATTATGGTGTACTG CATAACTTCACTTATGTTTCAACACAGGGCGATAGTAGACGGAGAAGGCT CGCGAACAGTTTTCAATGGCCACGAGCCACTGGAGGACATGCTGTACACA CGAGCGAACACCTACGTATCAGGTATGTGGACTTTTCTCATGACATATTC GACGTTACTTGTCAGCTTCTGTAATGGACGGTTTGTAATGTCTTAATCTT GTATTTGACATTATTAGGTGTTACTTGATACTTCAACACCAAAGATTGCA ACTAATTAACAGAAATCAAAGAATTAACAGGTTCAGTTGACATACAAGAC GGAAAACCGAAAAGACATTTATATCACACACACACACACATACACACAAA CGCACACACATAAACAAATATGTAGATATACATACATAGCTTATATATAT ATAGAGCTTACAATAAGGTTGGGTATACGCATAAGAATGCGTTTTCTAAT ACATGCAGAAAATAGTAAAGACGTCATCAATTGTGCAATTGATATTGTAA TTTTTTCTCACTTTCCTTTTACGTTCTCACTATGTTTTTGCTTTGTTTAT GTAGCAAACTGGGACGGTTTCCATGACAACGAGACTGGTATTTTTGGCTA CACGTGGACGGTTGGGACTACGCCTTGTCAGGAGGACATCCATCCTCACA AGGATCCACACTCCCACGTGTTCGACGAATCTGAGTGGACACACACTGGG ATTGCAGATGGGCTTGATCTTCCAGGTAAACCCAGTGTAATAGTTGATTC AACCATAGATGTGCAAAGCATCACAAGCATCACAAAAATGACGAATCCAG ACGCTACAAGAGTAAAATTGTTTATTTGTTCAATAATACACATACCAGTG ACGTGTTGAAGCAGTTGGGTCTACGTCCTCATAGATCTAACGATAGCGAC CATCTCTGCAATTTCTTGAGTAGTTAACAGCAGGCCTCTGTGCACTGAAA AGCACTGTAGACTAGGTAAAGTTTAAAAAAATTAGGTTTATGCCAATGTT ATGCATACGTCAGGACAATGAATTCGAATGTGGTAGGAAATCTGACCAAC ATGGCTGTTGGACCCTGTGTACCAATGATGTAGTTGCCACTGATCAGTTA TTCTTAACGACGTGTAGCCATTGTTTAAAACATTATATATTTGACAGTGA GTTTACATATCATATCAGAACATAATGCATTCGAGCTCGCGCCCCCATGA TTTGATATCACTATTCAGTTAAGTAATGGGGTAATAACTATGTATTACAG ATGGCACGTACCACGTTACTGTTCGAGCTATCAACAAGGTGGAATTTGGA GGTCCCATGGCGACTACAGTCTGCCACAGTACCCCGTACACCATAGACAA CACACAGCCGTTTGTCCATAGCGTCACCAATGTCAACTATGACGACGATG CACAACTAATCAGTGCGGAATATAATGTCAGGTAAGCTGCCTCATTCACA TACTATAGGTTGATCTATATCTATGGCAGTGCCATCATTACTATCATTAC ATGTGATTAAGCCAAAAACGACGTTATGGTAGTTGAATTACCCACGATGA TGGTTTTGGGATTGATTTTTTTTATGTTTAGCCATAAGTATGGCTAAACA TATTGTTTTCTCTCATGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTCCTGTCAAATCTTCAAATCGATTCATCTCTGTCATTTTTTGACCAAAT GACCTGAAATTTGGTACAGAGGTAATGTAGGCAAAAACCAATGTGCGTTC TTTTCCTTTTTTTGATATTGACCTTGAAAGTGATTTTATTGAGGTTTTTA GGCTATTTTTAGCATATCTTGGCCTCCTGCGCCCTGGTATTTCAACCGAA TGACCTGAAATTTGCTGTATATGTGGCTTGAACAAATATTTAAAGGACTA CATTCCCATTTTTGGCATACATATATTCAAAACGATTTATTTTGGGCTTT CTTGACAATATTTGCCACTTCTGTCACTTTCAATACTACATATGACCTAC AGGTCATTGACCCCGAGTGCCTTGCACCTGGCCAAGCTGGAAGTTTGCTT ACGAGGAGGAAAGACCGGACATAAACATTTAACGTGATTATCGGGAAAAC ACCATGTTCCCTTAAACTCAGTGGTTAAATTGCAGTTTAGGAAATTTTAT AACAGAAAACAAGTTAAATCAATGATTTTGTGAATGTTTATTCTAGCATT AGTTATTCCAGATATTTTCAAACTCCAAATTCTTCAACACAACACGGGAG ATCGTTTCTCCTCAGACTGGCGCGACACTCCTGTCAAAATTGATTGATGA TCTCTCTCTGCCGCCGACTTCATACATGATCAAAGGCGGGTGGTAGGCGG TGCGCGGGGAAACTTAAACATATAATGTAGCGAAGTGTTGCACAAGGAAT TCTCACGCTGAGGGGTACATGAAATAATGCTTACAAAATAGACCTCTATG AATCGGGCTACATTCAGCAATGGTAGACGGATTCGGGGCATGCCGCGCAA AACACATGGTCTCACTGGGGACAGGCGTTTTGGTCCGGCACGTTGTCGCA GCGGTGCGTCGCCGCTACGCGATCGAAAGCACGCCGCTGTCTGTCTCGGA CCAACACGCGTCTCCCGTGATGTGTAGCGTCCACCACCAGGCCTTCCTAC ATGTCCTACGTACGGGCGTATGGATCGTAGAATTCGGCAAAAAAGGAATG ATTAGGCCAGTAGAGTCAGTCCCCGGTAAGGTCAATGATTCGCCCCTTTG CGCTAGCTTGTAACGTTAAATGAATGTACCCTCTGGTGGCCAAACTTCAC TGACAAACTTTCTCCCTATTATCATCATGAGCTTGCGTTAGTCTGGTACT AGTGACTATTATGTGCCGGGAATGTTTATCTATCGCACGCCTTGGAAGGA AGTTCAACCATGATAAATGGTCGGCCGTTGCGAAAATTTGGAATCCCATG CTGTTGATTTTCGTGATTGAATCTGTAAGAAAATATATTTTCATGTCGTT CATGTTTTTGGGACGGACGCCGGGACGGGGTGAATTTTTTCTATCATTTT CGTCCCGTTAGTAATGCAAATCGAATCGTGTTGCACAAGAGGCAAAACAC TAAAAACGTGGGTCTTGTGGAGTGTTTTGGAGCGGGAAAATGCCGGATAT TAGCGGTGCCGAACAGTGTACATCGTCGCGCGCGGGTGACGCTCCGTCAA AACAAATCCGCTGGTGGTCTAGCGCGGCCACCGAAAATAGGCAGAAACAC ACAGGAGGACTTAGCACCTTCGTTTATGAGGGCAATTGTGAAAATCTTTT GTTACAAATTGTTCGAACATTGAAACATTTGGATAGATGGTTTGAAACTG TTCTAAATAAAGAGATTTTTGTGTAGTTACGTTCGAAATGTTTCCAACGT ATGTGAAATAAGTTCAAACATGTTATAAGTTTCAATTCTAATTGTTTGAA CACTTTAGAACTATTGTGACTTAGACATTCTTTTAATCAAAATAGTTCAA ACATATTACAAATATTATATTAAAACCCTCTCGGTGACTTTGAATTGACT CAAATATGTTGTTTTTGGTCATTTCCTTCGTCTCCTGTCAAATCTTCATA TGTATACTATGGAAAACTTCATTCTTCCCTGGGGTTGATCTTTTTTAATT CAATTTTGAACTGGGTTGATTATGCGCAAGAGTGTAATTTTCAGCGGATA TTTTTCGACTGGTTTACATGGAAATGGCACGGAATATCCCATTCTTGCAA GGGGAGGATTCTTTAATTATTTCTTTCAATTTTGAGCTGGAATGATTATG AAAAAGTCCATTTTTTAGCAGAAGTGTATTTGTTAATCAATTAGTGGATA TGGTTGTGGACTGGTCCATATTGTGTTGAGGTGCTACTGGAAGACTCAAT TTTGGACTGGGGTGATTCATTTTTTTAGTGCAAGTATTTTAGAATGGTCC ATTGTTATTTTGGGAGAGTCCATTTTTTGCATGGCGAGGAGTATGGCTAA ACATGCTGTATTTGCTCGCAAATGTTGCCTTTCTAGTTATCTTTGCATTT CATCACACATTTCTGTCCAAATCAGTGACCCATTGTCCAAGATCCGTGAG GTGGATCTTGGTCTTGGCCGAAGCAAACGTGACGTTTATCTGATGGACTG GCATCGTGATGACAACACCACGCACATCACACACAACTACCACATCCCGG ATGGAGTTCCAGCCTGGGTTAAAATCAGAGCTATCAACAATGGTAAAACC GTAACTATACTGCTGTTATCTTGCGCGTATACTGAAGAAGTCGTTCAGGA TTCTTCTGCGAGGAAAAATATATGGAACAAATATAATCATCTGAGATATG TGGTTGCGCAGCAAATGCTGTATTTGTGCTCTCTTGTTAACAAGATGGAA AACATTTGATTTGATGTTGATAAAACAATCTGGATATATGAATCATTACA ATAGTTTTACCTTTTCTCTGTGTAGTGGATCTCCGGAAGGCAGGCCACGC CGACAGCCCCATCCTTGTAGACACAAGCCCTCCCACGGCAGGTTCTGTGT TTGATGGACCAACAGCTGGCCACGATATCAACTTCCAAAACGATCAGACT GAAATCTGTGCAAACTGGCGAGACTTCCATGACGAGGAAAGTGGAATAGG TAATAACCATGGCGGTCGTTGTATGTCACTAGCACTGTCTAATGCTAGGG TCACTTTTCCAAGCCGGGGCCGGCCGGGCTGTTTGCGAAGACGAAAAACA AAACAAAAATACACATAGAGATCATGAAAATACGCAGAAGATGTTTAGGG GTAATTCTTGTGCGTTTATGTGTAATTTTTTGTCTTTTATATCATATTTT TCGTTCCCGCAAGCTGGAAATGTGACCTAAGCATTAAATGCTTCAGGCCA GGTGCTTCGTCACCCAAGTCTCAAGAGAGAGAAACAATTCCCTGTAGAAA TTCGTAGTAATATTGTTGTATCTTTCTTGCATGTATGTTTAAGTTTGAAG TTCGTATGTACATGAAGGTGCTAATCATTCATGTCCATGGAATATTTAAA GGTTACAAGACCTTACCATAGCTACCTGAATACAATTTGTTACTAGACTA TTACCTCTGGGGTGTCGGTACCTTCGCCGGTGCTGAGGACATCGTGCCGT TGGAAGTCATCTCCCATTCGTCCTTCAGAGGCTGTATACAGCTCTCAACG CCGTTGCTTCACAATAAGACGTACTACTCGACACTGATTGCTTTGAATGG CGGACACAAACATTTGAATATCAGTGTTTCTTCCGATGGAGGTACGAACC ATTAGGCACATCTTACGTGTACATGCACAAACGCTAGTCAAACTTAGTAC GTTTTATCTTCGATTGCCAGGAACAGTATTTCCTGCATGGTATACCGGTT GCGCTTGCTTTCTTTCCTTAACAATGTGTATCGTATACATTCTATGTTCT AATTTAAAACCAATTCAATTTATAGTGCTGGTTGATACCACTCCCCCGAC AATGGGTTGGATCAAAGACGGCATAGACAAAGTTGCGGACATGCAGTTCT CATCCGAACAATCATCAGTCTCAGCCAACTGGGCTGGTTTCAGCGATCCG GAGTCTGGCATAGCCTCTTACTCCGTCTCCGTCACAAGACGACATGCCAT CAAAGGTGGTCATGACAGCATGTTATTATGTTCTTCAAGAGACCATTACA CGTTATGTGGTATGTAGATGTTATGTGCAGTAATATACATTCGATACAAG CAAAATTGACACAGGGGTTCAAGTATAAATAAATGTCTTGTTTAATCTTC AAAAGTTTGACCAGAGCAAAAAAATAAGTTTCTTCTAATGTATTTATTTT TGAACTCATTTCGGTGCAATCAAGTGAATACTGGAGACTACATGGTTACT GTTTTCTTCATTCTAGGCAACGATACCTCAGACTGGGAGGTAATACATCC TCCAGAGGAGGTAGACAGTAACACAGATCACATCAACTGGCACCACTTCC ACCTTCACCATGGCGACACCGTGGCGGTTCAGCTCACAGCAATCAACAAA GCAGGTTCCCACGTTACAGTTGAGTCTGACGGTTTCGTGGTGGACACTAC GCCCCCTGTCTTGCACTTCCTCGGTGATGGACCGACAGCTGGGATGAACA AGAAGTTTTCAGTGAGTACATTTCTTCACTAACTTAAAAATCAACCTAAT ATGAAACTGTGCAACATATGTCAGTGGAAGTGAGTGTAAACCACGAGGGT GTACGCAAGCTAGTACTTTGTACTGAAATGCATATCATATCTGGAATCTT ACTGCAATACATCAAATATGGTTCCACTGGTTTATAGTATTCTGTTTGAA CTAAACCGATACATCTTAACAGTTTGCCAGCTCATTATTACCTTTATTTC ATATCCAGTCCAGCCTTAGCTTCCTGTCTGCAAATTGGGTCTTCGAAGAC AAGGAATCCGATCTGGACCACTTTAAGATATCGGTTTTCGAAACTCATGG TGGAAGGAAACATACTTTGTACCTGGGCGACAGGTATGTTGTTTTTGTTG TTGTTGTTGTTCTTAGTAACTCACATATGCTTGTACTTTTCTTGATTGAT GAAATCTTATGCACCAGGTCATATAATTTCTATACATCATTTAAGATAGA TTTCCTTATAAATCATCACTTTAATTATGTATCAGACATTAGCTTGGGCC TATCTTGTATATATTAGGCTTGTTTGCCTACCCTTATTCCTTATTACAGA TATGTTCAAGATTTATCTAACATCTTGCTGTATTCCCAATGTACCCTTAG GCCAGTTTTTCAGCCATTTCTAAAATGATCGTGCAATTAAGGGTTAATGA CCCGCCCCAAGGTGTATATGGTGTCATAACGTCTGGCCATGTGCTATAAC CACGGAATAAAAGCACCTAGTGAGTTAAGTGAACGAGGTGGTTTTAAGCC CCGGCAGCTGACCTCTAATACTATAGACTTTCACCTCCACCCTCTGTTAG GCTTTCACGTGTAGATATTGCTGTCAGCCCCACGAGCTTAGTTAGAATTC TAGAGCAATGTACTTACATCTATCGTACAGCAAAGAGGAGATAATTCCAG GATCAATGGTGAACTGGACAAGTCCACAGCTAAACCTCCGGCCAGGCAGA CATTACTCAATCCGGGTAACTGCCGTCAACCACGCTGGACTGTCATCGGT GCACGATACTGACGGTGTAGTTCTGGACACAACACAGCCATCGGTACTAC TTTTTCCATGTTATTGTGCAACTATCTATGCCGTCTTTACATAGTTTTCA CAATTCTATCCCTGGCATGACCATACAATATCTCGTATGTTTCTGTCTAA GGCATCTCAACAATTGTTTACCTCATCAATATCGACCATCTAACTTGCAA TTTCATCGATATCATGTCATGCATGTCCATCCGTGTTTCGACTACGTACG TCAAAAAATCTAATATGTATCTGGCACTATGTGGCTTCCATAGCAAGTTA CCAAGGTAACTAATGGCATCTCAATATTTGCAGATGGTGAAGGTCCGTGT AGGAGTTCTTGCAAGCGACGTGGAAGAGGTTTTGGATGGGTTTGTCTGGC AAACAGACAGGAAGGGAATCCTTGCAAACTGGTTAGCATCAGACGGACAG AGTGGCATCGAGGCGTACTGGATTGCAATTGGAAGTTATCCAGGTATGTA CCAACTTAGGGTTGCCAACAGGCTAAGCATGCATTGTTTTACCAGTACAT TGGCTGAAACTCAAACATGATATAACTAAATCTACCTGTGTCAAAAAAGT TATTTGTTGTACAAGATACGTACCAGGTCCTACGTCTACGAAAAAGGGCA AATTTGTCTAAGGGTTGATTCATACTTATATTTGCTGTGATACTGCACTT TTAATTCCATCTCTTTCTTTAGGGAATTTACTACGAAACGCCTGTTCCCT TTTTTCAGGAGGATCTGATCTATCAGAATTAAGAAGCATGGGCCCTGCGA TAGACGGGTACATCGGAGGGATTGATCTACAGCTAACCGATCTGAACACC AACACTCCTGTCTACTATGTGACGGTTTTGGCGGAGAACGGCGCGGGCTT GCTGTCACAAAACCTAACGTCACGGTACGAGATATAAGCTTTTTAACATC GCTTTGAGCTGCTAAAAAATTTCATTTGTTCCCAGTATTTATAGTGAGTT ATACAATTTACAATTCCGTTGTGGTCTTCTATGTCCAGCCCCATCAAGGT TGTACCCGGGGACATACCGGGAGTGGTGTTTGACGGCCCTCTCACAGTCT CCAACGAGACACACACCAACCCTGTCGATGTCGACTTCCAGCGGGACAAC ACAGCCGTCACGGTTCAGTTTGAAGGATTCCAGAGTGTCCTTAACGGACT TGCACACTTCGAGTGGGCCATTGGCACCTCTCCCCGACTGGACGACATCC AACCATTCAGTGCTGCTGGCATCGTCTTAACTCAAGACAGACAGCACCCA GGATATGGTAAGTAAAGGATCTCCTTATGAGACCTCTAAATAGTCATTCC TGCTTATCTGTTCAACTTTTATAGGTCACTAAGTACATACGAAACACACA TCTTGGGGTGTCCTCTTCCGGAATATAGTTGGTTTTGTTATTTGTTAATG GCGTACTTCTGTAAGAACCCTTTTTTTATTGATATGATATCAATAATAGC TTTCAGGTAGTTAAAAAAACATGTTCAGATACAAACCCTTCGGTCGATAC CATATCCCCATACCTCACCTATCCATGACTTTTATCCTTTAGGCTTGCAC GGATCGGGACATGCCCAAGCCTTGGTTCCCCTACAGGCAGGAACAACGTA CTACGCCACCGTCAGAGGGGTAACGGGGCGTGGGGACGTGCTGGAGACAT CCTCTGATGGTATCACCGTGGACCGTTCCCCGCCTGTAACACAGATTGTG GACATCGGGTGTGATGTTTCGAACGAAAGTTTAGGAAGCGCTGAGAACTG TTACCAGACGAGCAGTGACTACCTTGAAGGTGAATGGGTCACGGCAGATA ACGAAAGCGTCGTGGCGTATTCAGCCTTCTTCTACGGCACGGCCCCTGGT CTGAGTGACATCACACAACTCACCTCAGGCACAGATGAGAACAGTGTGCC GTCCACGCTTGTTGTTCCTGTGTCGGATGGAAGACCCAATTTTCTCAACG TCCTGGCCACAAATGAGGTAATTTTTCAACAAGTTTATCACACAAAAATG CATTGCAGATCCCTTGACAAACGTGTGCTATTTATTTTGAGTACATTCTG TTGTTCAATGTTGTTTGTAATCCGAATACTGCTATTACAATTTCACACTT GTAGTAATTATGGAACTCATATTCCTGAACCAGGATAACATGTATTTCTT GTATGGTTTGGTGTAGGTTGGTTTGAAATCTGTGGCCACTTCAAATGGTA TCATCGTCGATGATACCCCACCAGATGTCGGGATCGTCACCTGTTCTCGA TACGTACAGCCTAGGGTGCCCATTGCCTGTACATGGTCCGGTTTTCACGA CAAAGAGAGCGACATTTCACACTATATCTTTGGCCTTGGCACTGACGAGG GCGATGACTCCATTTACAACTTCACGCCTGTTTCCGCTGATCTTTCAAGT ACAGATGAACTACCCAAAGGTAAGACCATTGGAAAGATAGTAGGAGGCTA ATACCTGTATTTTGACGTCCCCGTTGATTAGGTAAGGTTTCATTTTGGCT TTTATAAACGGTTACGATACTTTAATCTTTGCATTGAAATTGTATACTTA ATACGATTATATTTATTGCAGGTGTGAATCTTGAACACGGTGGCACCTAC TATGCAACGCTATCTGCTGTGAATGGAGTCGGGTTGCAAGCCAAGGCCTT CTCTGAGCCAATAACAGTTGACATGACTCCGCCAATGCCTGGAATAGTC

Coding sequence (CDS) from alignment at Sc0000207:389895..400943+

>transcript:BL97327_cuf2 ID=transcript:BL97327_cuf2|Name=transcript:BL97327_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=3639bp|location=Sequence derived from alignment at Sc0000207:389895..400943+ (Branchiostoma lanceolatum)
TCACTGGATACAACAGGCCCTCCTGTTACCACTGCAAACCCACTGGACAA
CTTTGCAGAAGGAAAGAAAGGACGACTGAACTCAAGGCCACACCAGACAA
ACCGCTTTGTCATTCCAGAGGACTGTGCAAAACTTTGTCTAACCTTTCCT
ACTACTAAGTGTCTCGGTTTCAACTACGACTACGGATCCGTTGGAACTTG
TGAGATATTGGAAGAACTTGAAGTTCCTGGAGTTCATCTGCACCAGACTG
GACATTTTCATCATTATGAACGACGTGGGGTCGGTAAAATGCTGGAGTTT
GACTTTGACAGCCTGTCGCTGAGACATGACAATCTCTACTACTTCAATGT
GTATCTGCAAAACTCTCTAGGATATACGAGTATCCTGACATCAAGAGGCA
TAATGGTTGACCACACTCCCCCCTCGCCTGGCCTGATTAGCGACAGAAGA
TGGGACCAGGTTTATGGAGAAGTTTGTGAAGACTTCATCCCAGACGAGTG
GGAACACAAATGTGTTCAACAGACAGCACTTCCAAACCACAGGGCGATAG
TAGACGGAGAAGGCTCGCGAACAGTTTTCAATGGCCACGAGCCACTGGAG
GACATGCTGTACACACGAGCGAACACCTACGTATCAGCAAACTGGGACGG
TTTCCATGACAACGAGACTGGTATTTTTGGCTACACGTGGACGGTTGGGA
CTACGCCTTGTCAGGAGGACATCCATCCTCACAAGGATCCACACTCCCAC
GTGTTCGACGAATCTGAGTGGACACACACTGGGATTGCAGATGGGCTTGA
TCTTCCAGATGGCACGTACCACGTTACTGTTCGAGCTATCAACAAGGTGG
AATTTGGAGGTCCCATGGCGACTACAGTCTGCCACAGTACCCCGTACACC
ATAGACAACACACAGCCGTTTGTCCATAGCGTCACCAATGTCAACTATGA
CGACGATGCACAACTAATCAGTGCGGAATATAATGTCAGTGACCCATTGT
CCAAGATCCGTGAGGTGGATCTTGGTCTTGGCCGAAGCAAACGTGACGTT
TATCTGATGGACTGGCATCGTGATGACAACACCACGCACATCACACACAA
CTACCACATCCCGGATGGAGTTCCAGCCTGGGTTAAAATCAGAGCTATCA
ACAATGTGGATCTCCGGAAGGCAGGCCACGCCGACAGCCCCATCCTTGTA
GACACAAGCCCTCCCACGGCAGGTTCTGTGTTTGATGGACCAACAGCTGG
CCACGATATCAACTTCCAAAACGATCAGACTGAAATCTGTGCAAACTGGC
GAGACTTCCATGACGAGGAAAGTGGAATAGACTATTACCTCTGGGGTGTC
GGTACCTTCGCCGGTGCTGAGGACATCGTGCCGTTGGAAGTCATCTCCCA
TTCGTCCTTCAGAGGCTGTATACAGCTCTCAACGCCGTTGCTTCACAATA
AGACGTACTACTCGACACTGATTGCTTTGAATGGCGGACACAAACATTTG
AATATCAGTGTTTCTTCCGATGGAGTGCTGGTTGATACCACTCCCCCGAC
AATGGGTTGGATCAAAGACGGCATAGACAAAGTTGCGGACATGCAGTTCT
CATCCGAACAATCATCAGTCTCAGCCAACTGGGCTGGTTTCAGCGATCCG
GAGTCTGGCATAGCCTCTTACTCCGTCTCCGTCACAAGACGACATGCCAT
CAAAGGCAACGATACCTCAGACTGGGAGGTAATACATCCTCCAGAGGAGG
TAGACAGTAACACAGATCACATCAACTGGCACCACTTCCACCTTCACCAT
GGCGACACCGTGGCGGTTCAGCTCACAGCAATCAACAAAGCAGGTTCCCA
CGTTACAGTTGAGTCTGACGGTTTCGTGGTGGACACTACGCCCCCTGTCT
TGCACTTCCTCGGTGATGGACCGACAGCTGGGATGAACAAGAAGTTTTCA
TCCAGCCTTAGCTTCCTGTCTGCAAATTGGGTCTTCGAAGACAAGGAATC
CGATCTGGACCACTTTAAGATATCGGTTTTCGAAACTCATGGTGGAAGGA
AACATACTTTGTACCTGGGCGACAGCAAAGAGGAGATAATTCCAGGATCA
ATGGTGAACTGGACAAGTCCACAGCTAAACCTCCGGCCAGGCAGACATTA
CTCAATCCGGGTAACTGCCGTCAACCACGCTGGACTGTCATCGGTGCACG
ATACTGACGGTGTAGTTCTGGACACAACACAGCCATCGATGGTGAAGGTC
CGTGTAGGAGTTCTTGCAAGCGACGTGGAAGAGGTTTTGGATGGGTTTGT
CTGGCAAACAGACAGGAAGGGAATCCTTGCAAACTGGTTAGCATCAGACG
GACAGAGTGGCATCGAGGCGTACTGGATTGCAATTGGAAGTTATCCAGGA
GGATCTGATCTATCAGAATTAAGAAGCATGGGCCCTGCGATAGACGGGTA
CATCGGAGGGATTGATCTACAGCTAACCGATCTGAACACCAACACTCCTG
TCTACTATGTGACGGTTTTGGCGGAGAACGGCGCGGGCTTGCTGTCACAA
AACCTAACGTCACGCCCCATCAAGGTTGTACCCGGGGACATACCGGGAGT
GGTGTTTGACGGCCCTCTCACAGTCTCCAACGAGACACACACCAACCCTG
TCGATGTCGACTTCCAGCGGGACAACACAGCCGTCACGGTTCAGTTTGAA
GGATTCCAGAGTGTCCTTAACGGACTTGCACACTTCGAGTGGGCCATTGG
CACCTCTCCCCGACTGGACGACATCCAACCATTCAGTGCTGCTGGCATCG
TCTTAACTCAAGACAGACAGCACCCAGGATATGGCTTGCACGGATCGGGA
CATGCCCAAGCCTTGGTTCCCCTACAGGCAGGAACAACGTACTACGCCAC
CGTCAGAGGGGTAACGGGGCGTGGGGACGTGCTGGAGACATCCTCTGATG
GTATCACCGTGGACCGTTCCCCGCCTGTAACACAGATTGTGGACATCGGG
TGTGATGTTTCGAACGAAAGTTTAGGAAGCGCTGAGAACTGTTACCAGAC
GAGCAGTGACTACCTTGAAGGTGAATGGGTCACGGCAGATAACGAAAGCG
TCGTGGCGTATTCAGCCTTCTTCTACGGCACGGCCCCTGGTCTGAGTGAC
ATCACACAACTCACCTCAGGCACAGATGAGAACAGTGTGCCGTCCACGCT
TGTTGTTCCTGTGTCGGATGGAAGACCCAATTTTCTCAACGTCCTGGCCA
CAAATGAGGTTGGTTTGAAATCTGTGGCCACTTCAAATGGTATCATCGTC
GATGATACCCCACCAGATGTCGGGATCGTCACCTGTTCTCGATACGTACA
GCCTAGGGTGCCCATTGCCTGTACATGGTCCGGTTTTCACGACAAAGAGA
GCGACATTTCACACTATATCTTTGGCCTTGGCACTGACGAGGGCGATGAC
TCCATTTACAACTTCACGCCTGTTTCCGCTGATCTTTCAAGTACAGATGA
ACTACCCAAAGGTGTGAATCTTGAACACGGTGGCACCTACTATGCAACGC
TATCTGCTGTGAATGGAGTCGGGTTGCAAGCCAAGGCCTTCTCTGAGCCA
ATAACAGTTGACATGACTCCGCCAATGCCTGGAATAGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL97327gene:BL97327Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL97327_cuf2transcript:BL97327_cuf2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL97327_cuf2-E1BL97327_cuf2-E1-1564476830-388485Branchiostoma lanceolatumexon
BL97327_cuf2-E2BL97327_cuf2-E2-1564476830-388487Branchiostoma lanceolatumexon
BL97327_cuf2-E3BL97327_cuf2-E3-1564476830-388489Branchiostoma lanceolatumexon
BL97327_cuf2-E4BL97327_cuf2-E4-1564476830-388491Branchiostoma lanceolatumexon
BL97327_cuf2-E5BL97327_cuf2-E5-1564476830-388493Branchiostoma lanceolatumexon
BL97327_cuf2-E6BL97327_cuf2-E6-1564476830-388495Branchiostoma lanceolatumexon
BL97327_cuf2-E7BL97327_cuf2-E7-1564476830-388497Branchiostoma lanceolatumexon
BL97327_cuf2-E8BL97327_cuf2-E8-1564476830-388499Branchiostoma lanceolatumexon
BL97327_cuf2-E9BL97327_cuf2-E9-1564476830-388501Branchiostoma lanceolatumexon
BL97327_cuf2-E10BL97327_cuf2-E10-1564476830-388503Branchiostoma lanceolatumexon
BL97327_cuf2-E11BL97327_cuf2-E11-1564476830-388505Branchiostoma lanceolatumexon
BL97327_cuf2-E12BL97327_cuf2-E12-1564476830-388507Branchiostoma lanceolatumexon
BL97327_cuf2-E13BL97327_cuf2-E13-1564476830-388509Branchiostoma lanceolatumexon
BL97327_cuf2-E14BL97327_cuf2-E14-1564476830-388511Branchiostoma lanceolatumexon
BL97327_cuf2-E15BL97327_cuf2-E15-1564476830-388513Branchiostoma lanceolatumexon
BL97327_cuf2-E16BL97327_cuf2-E16-1564476830-388515Branchiostoma lanceolatumexon
BL97327_cuf2-E17BL97327_cuf2-E17-1564476830-388517Branchiostoma lanceolatumexon
BL97327_cuf2-E18BL97327_cuf2-E18-1564476830-388519Branchiostoma lanceolatumexon
BL97327_cuf2-E19BL97327_cuf2-E19-1564476830-388521Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000207genomeSc0000207:389895..400943 +
Properties
Property NameValue
Transcript idBL97327_cuf2
Biotypeprotein_coding