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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97353_cuf8 >transcript:BL97353_cuf8-protein ID=transcript:BL97353_cuf8-protein|Name=transcript:BL97353_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=384bp
ANGVMTGNNRYQNQVHFSCNSGYQLVGSTTLTCQADQTWSGPVPNCSPSQ
CPSLQLTNGAVTGGTVFGSTATCGCNPGFLLVGQPTTTCQSSATWSAATP
SCTIKNCQPLVAPNHGSVSGGNTYGDVATYDCDPGYEMVGSSTQTCQDNE
HWTGSPPYCIRMECATLDAPLHGSVVSGTSYVGDTVTFSCHTGYKITIGS
PSRTCQTTQTWTGTQPTCTKIKCPSVSAPANGYMVGDIEFGDQLQFSCSP
GHQLVGSSTLTCQADQTWDGTPPTCDPIQCPPLQPPQNGQVSGGSFYGDT
NTYTCDIGYLLFGDSTSDCLSTGTWSSQPPQCTLKTCPPLTAPTHGSVVG
GNNYGDVANYTCDLGYDLVGVPSQTCQDNQHWSG Run BLAST on NCBI mRNA from alignment at Sc0000091:628477..632822- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97353_cuf8 ID=transcript:BL97353_cuf8|Name=transcript:BL97353_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=4346bp|location=Sequence derived from alignment at Sc0000091:628477..632822- (Branchiostoma lanceolatum)
AGCAAACGGGGTCATGACAGGAAACAACCGGTACCAGAACCAGGTGCACT
TCAGCTGCAACAGTGGTTACCAGCTGGTAGGCAGCACCACCCTCACCTGC
CAGGCTGACCAGACGTGGAGTGGACCGGTGCCGAACTGTAGCCGTGATTT
ACCGTTTACTGTTATTTCCTCCATTTCTTTTGATTGTTTTCACTTTGTGT
TTGAAATCTTTGCAACTGTCATAAAAGTGTGATTTTGAATTTGAAAATAA
TATTTTACTCTGTTTGTTAGGGATCATTTTCCATATGTCTAATATGATAT
GTGAAACAAACTCATAACATGTGAAACACACAATAGTATTAACTGTAATG
TTAGCTCTCATAATTCCGCCAAGTTCCCTAAGACATCAAAATAAATGGTG
CTTATTGAGACCTTCTCAAAATGTCTTGAGCACCTAGATATCCAAATTGT
GCTTACCCAGGGATTTACTGAAATGCAGTATTAGTAGATCTCTTTAGATT
CATCTTTTTTATTTTTTATGCGGCGGTCTTGGGGTACCAGAAGGACTTAT
GAAAGTCTACATTATCCAGACATGTTACACCACCAAGTTACATCCTTACT
GTATTTCATGTGTTACAAAATGTGATATGTACTTCTTTCATTCTACCAGC
GAGTCAGTGTCCCTCTCTACAACTGACCAATGGTGCTGTAACGGGCGGAA
CTGTGTTTGGTTCCACGGCGACCTGTGGTTGTAACCCTGGGTTCCTCCTG
GTCGGTCAACCCACCACCACCTGTCAAAGTAGCGCCACCTGGAGCGCCGC
AACTCCTTCATGCACAAGTGAGCAGCACATGGCAACTTATTGTTAAGAAT
CTCATGAGCTTTATCTCCCAGCAAAAGGGTAAAAAAGATTTTGGACTGAT
CAATGTACTTCTGTTATGCAGAAGGCATTATAACTAAATTGTCACAAAAC
AACAAGATAGACTCACCAAATACTTGAACATGTGGCTTTCTTTTCAAAAA
TATATCCATGTTAGAACAAAGTTAAATCCTTCTGAATAATGTTAATTGTA
CTAACATAGATGATATATAGGCTTCTTTTGGAGTTCAAGAGTATATCTAG
CATGTGTGATAGTCATGTTAGAACAATACATGTAAGTATATAATGTTAAT
ACAATAGTTTGGCTTTCATATCACACAAAGCCTGAAAAATAAATACTCAT
TTAGAAGTTACATCATGTTAAATTGCACCATTTCCTTCACCAGTAAAGAA
CTGTCAGCCCCTTGTGGCTCCGAACCACGGGTCGGTGTCTGGTGGGAACA
CCTACGGGGATGTGGCCACCTATGACTGCGATCCAGGCTATGAAATGGTC
GGGAGTTCCACCCAGACATGTCAGGACAACGAGCATTGGACAGGCTCTCC
ACCATACTGTATTAGTACGTAGTCACTCACTTCTGCATTTAGACCAATTT
GTCAACCAATAATCAACAAAACGGCTTATTTTGGGACATTTCCATGTGTT
TTGTTTGTAATACATAATGACAAAACTGCATCAGACCTTGAATGTTATTT
GTAGCTTTTTTGGACCTGTTGCAGCTGATTGATTTATCTAGCATATTGTA
TGATTGGCTGTGAGCTGTCAATAAGAAACCCTAGCTGTCTTGAATTATAT
GATATATACTTGGCAACATCACAAAAAGAGGCATTACAAAAAGATAATGA
AGCTCTCATATTCTCGTAAGTTACCTTGATTTGGAATTATGATTGTTGTA
ACATACAATTTTCATTATCAAACTTTGGATCAGTAAGTTAATCAGAGACA
TGACTTAATTCCAACTTCAAATGACCCTACCTTTATCAATGAAAAAAATT
GCCATCATGTCCATTCAATTGCAACCCATGTACTGGAATATTATCAAACC
TGGCTGTATGTTTAACATATGATATTTTTTCTTATTTCTAATCTATTTTG
AAGGAATGGAATGTGCAACCCTGGACGCACCCCTCCACGGGTCCGTCGTC
AGTGGGACCAGCTATGTGGGTGATACTGTAACCTTCTCCTGTCACACTGG
GTACAAGATTACCATCGGTTCTCCCTCACGGACCTGTCAAACAACACAGA
CGTGGACTGGAACACAGCCAACTTGTACAAGTAGGCATACCCATTTTACT
TTGTCATGATTGACATCTATGCAAATTACATTGTCATTGTAATATAGCAA
CAGTTCTGAGAGCTGATTAAAAAAAGGTGTCAACAACAGCATATGGTTAA
GTTTTGTCTTAGCTGTAAGTGAGCTAAAAGGGAATATTTCCTTTCTGTAC
AGTTCTTTTTCTTAATCCTCCAAGTTTCATTTAGATATGGTTAAATCATG
TATTTATTGATATCACTGAGTAGATGTAGTGTTACCAGTCATTGCGCGAT
ACCAATTATCATCACTTTGGGTTATGTCCACATTTCAAGGTGTATCATGC
AAAGCCATTGTTTAGGAGCAATAAAGATCGACATAAGTATGATCCTTGGA
CATGACTTTGCTTTATAAAAAGCAATAAAATAGGCTTGCATCCAGTAACA
CAACAGAATAAACTCCTGAAACCGTAACAACAAGATACCTGGAAGCGTCA
TGCATGATTGACCCTAACATCTAAAAAGTGGGCATCATGATCAGAAATTT
GCAATTTTTTCAACAGAAATCAAATGCCCTTCTGTGAGTGCACCAGCCAA
TGGCTACATGGTGGGAGACATAGAGTTCGGTGACCAGCTACAGTTCTCGT
GTAGTCCCGGTCATCAACTCGTTGGAAGCAGCACGCTGACGTGCCAGGCT
GATCAGACGTGGGACGGGACTCCGCCAACCTGCGATCGTGAGTTTGAAAC
TCGCTACTTATTGTTATGTCTTATAACCCAGCACCATGTTTCTTCATCCG
GGTCAGTCCATATCGTCATACAAGCATTCGGTCTCGTTTTCAGGGTAGCT
CTAATGGTTAAGTGAGTGGAAGATCATACAACTTGGGAACGAGAGGAGAT
CTCATACCTGGTGTTATGCATGGGGACCGATCACAAACAGTGGCAAAGGG
GTTTGAGGAATAATAAGCTTGACTCTGCATTTTTAGATTAGGCTGTTAGA
AAGTCAGGGACACCTAGGCTATATACAAGACATGCAGCAAGTAAAAGTAA
GCCCTGCAGGAGTCGCCACGGCTAAGAATGCTTTTGCATGATAAGTTCCC
ACAATTTTTCTCTGACTATTGTAAGTTTTAAATAAAATTGATAAGGGCTG
ACAGCTTTATTTTTCATTGTATATACATCACGACAATTTCATGCAATTTG
CACATGAAACTTCATGTGACTATGATCGTGTTAAATGTCGTCTTTTCTCT
GTCAGCCATTCAGTGCCCACCCCTACAGCCTCCACAGAATGGCCAAGTCA
GCGGCGGTAGCTTCTATGGGGACACAAACACCTACACATGTGACATTGGT
TACCTTCTGTTTGGGGACAGCACCAGTGACTGCCTCAGTACTGGTACCTG
GAGCTCACAGCCACCTCAGTGTACACGTAAGTCACAAATCTGCTGTGGAT
GTGTTGATGGTGTGAGGAAGAATTGTCTCTCTTGCCATGTTGAATGTCTA
CATTTGTTTTCCACAGAAAATGCCCAAAGAGAACATAATACAATGTATAT
CAGTTCATAATGTTATTTTGTCCCATAGTCCATTCTTTCTTTTACATTGC
AGAGTAAGACACACACAGGTTTTACCAGTCTATTTTACATTTTCACACAT
CTTTTTTGATACAAGTTATAACTTGTGACACTTACCCTAAAGTCTTAAGT
AATAGAAAAAGACATGATAGTATTTTCAAACACAAGGTCCCAATACCGTA
ATGCAGTTTTGCATTTCTTTGTTGGCATTTTTAAATGTAGCATGATCTAT
TCTCAGACTGTAATGTTGGTCTCCCACCAACATACTCTGTCCTTGGTGCT
GAACTGGCTTGTAGCACATGATACACTCTTTTAAGTCACATTGAATGTAT
CTTCATGGTTACTTTTGGATAATTTTCTGTCATTAGATATAGCCTGATGC
ATAAAGAGTATTTCCTATGTTTGTTCAGATGTATGGTTGGTGATTGTTGG
AAAAAAACAACATTGGCTGCATTAAGTATTCAGTAGTGATTATACTGTAC
TATCGCTGTCAGCATTGTTACAAACTCTTGTTTCTCTTCATTAGTCAAAA
CCTGCCCACCGCTGACAGCCCCCACTCACGGTAGCGTGGTAGGCGGGAAC
AACTACGGAGACGTAGCCAACTACACCTGCGACCTGGGCTATGACCTTGT
CGGGGTTCCGTCGCAGACATGTCAGGACAACCAGCACTGGAGTGGG Coding sequence (CDS) from alignment at Sc0000091:628477..632822- >transcript:BL97353_cuf8 ID=transcript:BL97353_cuf8|Name=transcript:BL97353_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=1152bp|location=Sequence derived from alignment at Sc0000091:628477..632822- (Branchiostoma lanceolatum)
GCAAACGGGGTCATGACAGGAAACAACCGGTACCAGAACCAGGTGCACTT
CAGCTGCAACAGTGGTTACCAGCTGGTAGGCAGCACCACCCTCACCTGCC
AGGCTGACCAGACGTGGAGTGGACCGGTGCCGAACTGTAGCCCGAGTCAG
TGTCCCTCTCTACAACTGACCAATGGTGCTGTAACGGGCGGAACTGTGTT
TGGTTCCACGGCGACCTGTGGTTGTAACCCTGGGTTCCTCCTGGTCGGTC
AACCCACCACCACCTGTCAAAGTAGCGCCACCTGGAGCGCCGCAACTCCT
TCATGCACAATAAAGAACTGTCAGCCCCTTGTGGCTCCGAACCACGGGTC
GGTGTCTGGTGGGAACACCTACGGGGATGTGGCCACCTATGACTGCGATC
CAGGCTATGAAATGGTCGGGAGTTCCACCCAGACATGTCAGGACAACGAG
CATTGGACAGGCTCTCCACCATACTGTATTAGAATGGAATGTGCAACCCT
GGACGCACCCCTCCACGGGTCCGTCGTCAGTGGGACCAGCTATGTGGGTG
ATACTGTAACCTTCTCCTGTCACACTGGGTACAAGATTACCATCGGTTCT
CCCTCACGGACCTGTCAAACAACACAGACGTGGACTGGAACACAGCCAAC
TTGTACAAAAATCAAATGCCCTTCTGTGAGTGCACCAGCCAATGGCTACA
TGGTGGGAGACATAGAGTTCGGTGACCAGCTACAGTTCTCGTGTAGTCCC
GGTCATCAACTCGTTGGAAGCAGCACGCTGACGTGCCAGGCTGATCAGAC
GTGGGACGGGACTCCGCCAACCTGCGATCCCATTCAGTGCCCACCCCTAC
AGCCTCCACAGAATGGCCAAGTCAGCGGCGGTAGCTTCTATGGGGACACA
AACACCTACACATGTGACATTGGTTACCTTCTGTTTGGGGACAGCACCAG
TGACTGCCTCAGTACTGGTACCTGGAGCTCACAGCCACCTCAGTGTACAC
TCAAAACCTGCCCACCGCTGACAGCCCCCACTCACGGTAGCGTGGTAGGC
GGGAACAACTACGGAGACGTAGCCAACTACACCTGCGACCTGGGCTATGA
CCTTGTCGGGGTTCCGTCGCAGACATGTCAGGACAACCAGCACTGGAGTG
GG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000091 | genome | Sc0000091:628477..632822 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97353_cuf8 |
| Biotype | protein_coding |
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