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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97391_cuf7 >transcript:BL97391_cuf7-protein ID=transcript:BL97391_cuf7-protein|Name=transcript:BL97391_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=282bp
GDCVFPFEYANKTYDSCTTDDNDGFAWCSMTPLFEDNWVYCESGGCGGAL
TDRQGRVESPNYPVGYPDNQDCKWLLQPRGGHATISFGDFNLEASGSLFT
SCPFDYVQVTALDGTDTGQRCGTDTPANVSSHTDITVHFVTDASINSRGF
YFDYSVLGGAPGTQACGGEVTGNSGEVASSGFPAHYDNNVDCTWTLPPRD
GTTGVTVTFTEFMLEHVEEHELGQYTGCIYDFVEIFDGPNRLGRWCGDKG
PDPVTSANGLKVRFKTDAHTVDSGFKFSYQYS Run BLAST on NCBI mRNA from alignment at Sc0000073:1077218..1085635+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97391_cuf7 ID=transcript:BL97391_cuf7|Name=transcript:BL97391_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=8418bp|location=Sequence derived from alignment at Sc0000073:1077218..1085635+ (Branchiostoma lanceolatum)
CAGGGGACTGCGTCTTCCCGTTTGAGTACGCCAACAAGACGTACGACTCG
TGCACAACGGATGACAACGACGGCTTCGCCTGGTGCTCCATGACTCCGCT
GTTTGAAGACAACTGGGTGTACTGTGAGAGTGGTATGTTGGATAGTGTCG
CTGCTATATCATTGATAAAGACAAACATCACTCTTGATGTTAGTCGTCCT
TCTACATGGTATTTGGAAATAAATTACAAATCCACATTTTGCGCTCGTAT
TTCCTTCTCCCGTCGTTGTTCAGGTGGGTGCGGCGGCGCCTTGACGGACC
GCCAAGGACGAGTGGAGTCGCCCAACTACCCCGTCGGTTACCCCGACAAC
CAGGACTGCAAATGGCTGCTCCAGCCGCGCGGAGGCCATGCCACCATCAG
CTTCGGCGACTTCAACCTGGAGGCCAGCGGCAGCCTGTTCACCTCCTGTC
CGTTTGACTATGTCCAAGTCACTGCCTTGGACGGTACAGACACCGGTACG
CTGTTCTCTTTTCATATTTATAAGAAAAGAAATTTCTACCAGTAACGTTA
CAAGTACATTTCATGAACTTTCTGTGCTTGACGTCACTGGAGGTAAATTC
CATAACTTACGTGGCTACTGGCTACAATACATGTCCGTGAATACTTCAGA
CGTAACTTTAGAAAAGTTTTCATTTGATGATGCATTTCTGTGTTGTCTTT
TTCAGTACACTTGAGGAACGTTCGCTTGTCCCTCACAAAAATGAGACAAA
AACGCCATCGTCCTTAAAGTTTCCGTCCATGAATCTGATGAACTCATTCT
TGTTTACCTCCTCAGGGCAGCGCTGTGGGACGGACACCCCTGCAAACGTC
AGCTCCCATACAGACATAACTGTCCACTTTGTGACGGACGCCAGCATCAA
CAGTCGCGGGTTCTACTTCGACTACAGCGTGTTGGGCGGCGCGCCCGGGA
CACAGGCGTGCGGAGGAGAAGTGACAGGGAACAGCGGCGAGGTCGCATCA
TCTGGGTAGGTGGCGCCCTTCTAAACTGAAACTCTTGTAATAGGAGAATA
TTCTCCAAGCAGAGGCTTCGGAGAGAGGTAGTTTTGTCCGGGATTTTTAA
CGTTCCTCTCCTCTCCATAGATGTGTGTAGAGCGACAGTGATAGCAGTTA
GGGACAGCAAAACACAACTGTTAGGTTGCACTTAATAAATGTCCCACATC
AGGCCACATAAAAAGACTTTAGACGTTAAAATGATGGCCGAGAAAGGAGT
GATAGCGAAATTACATAAATGACACACATATCATAATAGAAGGCATGAGA
AGTCATCAAACATATCAAGATTCAAACACTGACAACACGACCACGCCACC
TGCTAAATTTACCAGAATAAACGAGGTACCCCCAACTATTGACTCAAAGA
TGACACACGGTGCCAAGCGTACGTGTACCTCCGTGTTGCTTTGCGCGTGC
CGTACTTTTATTACCCATATATGCTAACCTTCCTGTGCCCCCCCCCCCAA
GCTTCCCGGCACACTATGACAACAACGTGGACTGTACATGGACCCTGCCT
CCCCGTGATGGGACGACCGGTGTCACCGTCACCTTCACCGAGTTCATGCT
GGAGCACGTGGAGGAACACGAGCTGGGGCAGTACACAGGCTGCATCTACG
ACTTCGTGGAGATCTTCGACGGCCCGAATCGACTCGGTTAGTCCACGGAA
GTTCACCAGACTACTGAATGATTTGAAAAGATTTGGAACAGCTTCAAACT
AAACACCGTCTCTTGAGTGTTGGGGGCGGAAATCGGCATACTTTTGGTCA
TATATTTACTATCAGATTAGCTTTGTCCCGTATTTTAATTCATCCTATAT
TTTTCAAAGAAAAAGGACTGCTCTGCAAATCTTTAACGCCTTAGACATTA
ATCTAAATCGCCAGTTTTAGGTACGATTCTAACGTTACATGTGTCACTTC
TATCTGAGTTGTATGCGCGCAAGCGTTTTATTGACTAGGTCAACATTTAA
TCTTTTTTAACTGTCCCCTCTCCCCGTAGGCCGGTGGTGTGGTGATAAGG
GTCCAGACCCAGTCACCTCCGCTAACGGACTGAAGGTCCGCTTCAAGACG
GACGCCCATACAGTGGACTCAGGATTCAAGTTCTCCTACCAGTACAGCAC
CTGATTAAACAGGTAACGACAGGTGTTTTCTGCAATATCATTGGCAGCGT
CGTAAGATCTGTTTTACTCAAAATCTGGGGCAATGAAGAATCTACGTTGT
AAAACAAAGCACAAAGTTCATATATGCTTGCATAGCTTCAGCAAAATGCC
CAAAAAGTAAAAAAAAAAACAATACATATATGCCTATATAGATTATGAGA
TTTAGTTGTAAATATTCTTCAGCAAACGCAAATTAACAGAGTGTATTGCA
TACTATAATCAACAACAACAAAATAGCAAAGCTATGACAAAATCATATCT
ATTAATTAAACGTTTATTGTATCTAACTCGTTTAGTTATTAGTTTTATTT
TCTATTGCAGAGGTGAATTTCCCCAGGTGAACCAAGCTTTGACCATGGCT
AGTTTGGCTGATGTTTGATCCTGTCCGATGGAGGTTTATGAGATATTAAA
CGATGGAATATATAACAACACTTAATATCATGGTGTTCCTGTGTGTGTCC
TTCACTGATATTGTTATCAGATTCTAGTCGATTGAATGATGTTCTTGGAA
ACATCCCTCTCATTACTGCAAATGTATGTAAAAAGTCAATATTCCATACC
GAAGCATCACATTTACATTTTCTATTCAATGTTCATTAGAATTCAATATT
CCATGTTAAAGTAAAGCGTTTCAAAATAAATTACTATTACCAAGGTGTGA
TTTTGAATTCAACATGCCATTCAGCCATTGAAACAAAACCTTTACCCAAG
GCATGTCCATACTGTGCGTTAAAATTCAGTACTTGTGCGTTGGAAGTCCA
TATTCAATTTAGCTTTAGTAAGGAATGGATCAATAAAGATCATGGGGGTT
GGGAAGAAATGGTTTTACAATATATTTGGTTCTCCAATGCAAAATTCATC
TTCCCTATACCCACAGTCTTTCCTGGTCCATCCCTAATGGCTAGTAGGCA
AGGCTTGGCACATCTTGGACAGGCAACTTGAAATAACCTGACCAGATGAG
GGTCAGATTGGACACTCCGCTATTTCTTAGGAACAGCGATGACAGCCACA
CACTTCTTCACCCATTCCTCTGACGAGATGGTTGACAGCATGAACCTGGA
GAGGTAGAGTTAGTGAGAACAAAACTATTTTCGTTGTATCATTAATCATC
AATCGTACACACCACCAAAGTATAGATATCACTTTAAAAAACTATAAAGC
AGGATAAAGGAATCGGAACTGTTTGGAAAAGAACTGACCTGGCCACATCC
GCACGGCATATCCCCGGTCGCATCCCCTCCCTGTCATGTACCTGCTCACC
TTCCTCAGTTCGGAACTCCATGTCTAGGAAATACAACAAAATCAAGGTTG
TCTTTTCAATGGTGACGCATGGTTTGGGATACTAAACCCTGTTCATTTCC
TCGGTGCCTGAAGTCAATCCCCCTTCCAACCACCACTACCTCATCCCCAG
CCCCACCGAAAAGGACGTGGGGAGCTCGTTGCATGCATATAGATAGACCT
GGAACGGGAACACTGCTGCTTAGATCACAGTATACATTTGGCAATCAATA
GAATTATGAAGCAACTGAATCATACCAGTTACTGGTCCTGTTAAAAGACG
CGGCGCCTTAACAGCAGTAAAGTCGATGTCATCACACCCCTGAAGGTACT
GCTCCGTCTCTGCTAAATTTTGAAAGATTCGTCCTGTAAACAAAGGCTTG
AAAACCCAGCGCGTCAGAAAAGGCGGTGGTTCTTTCGGGTCATCTGAAAC
AATGACAAATATAAGAATATTACGGGATGGACCGTATTTGTTGCTATAAC
ATACAACCATTTCGTTACCAATGTCAAGAACCACGTGCTGCATTGTATGA
AAATATCAATTGCTGACAAAAATTACAATAAGAAGAAAAAACATGTACCA
GTGAGGTACCAGGACGACACAAAGAGCAGCCGCCGGATGCTGTTCTTCCT
CATGGCGGAAACAATCACCTTCATGGAGTCGGTGAACAAGGTGACTGTTG
ACCATGGAGCGAGCTTACCTACAGAAGGCAAAAAACTGTGTTGTAAGAAA
CATGTACACAAGGAAAATGTCTGACCCTCCCCTCTTATTTCTTTCGGTTT
GCCACCAACCACTGCTCGGTAAACTAAACTAAACTAAACTAAACTAGACT
ACACTATTGTCGCTTTTTCAAGGTACATATCTACATACTTCCCAGGCAGG
ATAGGACAGCATCCTTGTCTTGTAGATGTGGTTCTATCGACTCAGGAGAG
GAGAAGTCGATCTTCTCAATCTGTGGATGATAAAAAGAATAAAAGAGTCT
GTGACTTTAGCAAGGCACCAGCTGCCAAATAATGATCAACTATAGAATGC
TGATTAGATTCTCATACAACAGCAAACTTCAACAACCGTTATCTAAAATG
CTTACACCAGTTGTTTACCATAAGCACACATGATACATACAAACAGTGGC
ATGATAAGCGATACAATACGATAATAGGCTAGGACAATAACCAGCATCCA
TGAAAATTGTGTTGAAAAAATGAAAAAATGCATCACTTCTGTTACACAAT
CAACAATACAAAATAGTCCATTGAGTACGTTGTAAAATGATGACAATACA
AGGCTAGGACTTGATTTCAACTGAAAGCAAACGTTCCATCTGCTCTACTG
CAATCTAACTTGAACTTGACAAGTACTAGTTCCAACACTGAGATGTACTA
AGCATGTGCTAAATGCATGTTATACGCTTGTCTAATTTGAAGAAATGTCC
ATAAATGAACCGAAAGCAAACCTTGAAGTCCTTATCGGGGACCAGATCTT
TCATCTTGTCTGGGTTCCTGACCAGAGCAGTGACGTCATGGCCCAGCGCA
AGGGCCTGTTGTACAACCTCAACACCTGCAGAACAACATTGCAAAAGCAC
TAAAAATGGCAGCTTCAAAGACAACGTATATTTCTTTCTCTATAAATTTC
TTGGGGGCAAACTATTTAGCTATGGAGCATTGAACATTCTTTTCTATCTT
ACAATGTATATTTAATATTTCAGATCCAAAAGAATACATTGTTTGTAGAT
AAAACATCAACATTGGGGTTTCAAAAACTAGTCATATCCGCAGTCTGGAC
AGTCACTTATTGGACGTACATATTATGTATGTATCAATAGTCTTTATCTA
ACATACCTGTACGGCCAGTGGCCCCAAACACTGCCAGTTTCATGGTGCAC
GTGATCAGACGCGCTTGTCAGTCAAAAGTCCTGTAGGGAATTGTCTCTGC
CTCTAATCAATGGGAAATATAGAGAATAAAATGAAAATAGATATATCATG
CAAGGCAAGAAGCACGTGGTACTAGTTGAATAATGACATTTTTTTGTCTT
AAAGCCCTGTCGCACTTTTACACAGCGGGTGTCTGACATACAGGACTGTC
AAATCTTTGCGTTGTTTCCTTCTTTTATGTATGTACAAAAATGGTCGCAA
ATTCACGTCTTTACTCTTGACCACCGTTTCACCTGATAGCCATCTCTCAT
AGAGTTAACACGGCCGTCATAAGTACATATTTACAGATCTTCTGAACTGG
GTCACTGTTGAAGATTGCATGACATGTGGCCGCTTGTACTTTGCCCGCGC
GCATGGCACTTGTACAGAGTGGCCGAGAAAATGGACAACCATTATTACCA
ACTCTGTGATAAGTGAACGGGAGAATGTGAGTCCCAGTATGGTATCAACG
GAACAAATATTAGTTGTACTTTATGTAAACCTTACTTTAATCATAGTGCT
GCGCTTAACGAGTTGGTAATGTATCCTTTTTTTATGGTCCCCTGCAGTAC
GAACTGATAAGATGACGTAAGATCTTGCAAGGTTGTCGCAACGATCCAAC
CCTGGCGCAATCGTGCTGACAAGTACACACCAACTATGAGATATATATGG
CCCCCTTCAGTCAATGGAGAATACCCGACAGTACGTTGACGGTCTAGTGC
ACTAGTGCATGACGCTGTGTGAAAGTTTATCCAGTACGACTTAATCTTTC
GCACGCGAATGGCAATGGACCAAAACCTCAGAGCGGTCGAAGAAGTAGTC
AAGATCTCTGCACGGATGGTAATGATTGTCGTGGACTTCCATTAATATCC
CTAAACGTACTCTGAAGTCACATCCATCGCACGTTGGTTTAGTACATACG
AGTATACATCTTAAAGCTAGCATTTTATCCGCTGGATGCCTAGTTGAACA
AGACCGCACGTGGCGTGCAAAAATAGCAAAACGAGCTGAAAAGAGATCAA
AAGCGGTAAAGAAATAAGCCTTATCCGTACATCGGCCTGGGAATTAACAA
AAGAAAAATGGATGTGGTAGGGATCCTAACCAGTTTATCACTCTCACCTT
GTACTTTCCGAACTGTTCGAGACGCAGACACCACACTGCCGATGACTCGC
GACAACAGGTTCCTATACCACGTGAGTTTTTTTTCTGGGTCACGGACTTA
GGAATTCACCTTTATGGACATGCTGATATAATAAATCCAAAGTCCAAGCG
GCACGTTAGCTCCACTGTGTTAGTTCGTTAAAATCCTCCCACACCATTAT
TGATGTGCAGGGCTGTGCCCATCTCCGTTTCATAGCCCTGGGCCACACTT
TGGTGCAATCGCTGTAGCAGGGGCTAGTCCACTGGCAGTGAAGTGTGTTT
AACTTCCATACTGTTTCAGAAATATGTACCATTTTTATAAAGTATTTGGT
ATGACTCAATGCGCCTCTTGTCCTGAGGTGTCCTACCTGGGGCTTGAACC
CCAGTCCTTCTGGTCTGAGTAATTTGAACCAGATGTGGTGAGAGGCAGAA
GGCACAGACCACTACACCCCAGGGACACCCCCAACTCCAATGTGACCACC
AACGAAAGGCGTCGGCAAGTCAAGCTGACAGATGAGTCCATCCATGTCGG
ACTCCCATTTGAACTAGGACAAATACACAGCCTTACGAAGTTCACGGGAT
TTTCTTATTACTAACGTTGCACATACTGCTTTGAGTTTTGACTTTAACAA
TAAACTTTGCTGTTCACCGCCCTGTTGTTTGTAACATTGTTATTCTTTGT
NGCGTGCGGAGGAGAAGTGACAGGGAACAGCGGCGAGGTCGCATCATCTG
GGTAGGTGGCGCCCTTCTAAACTGAAACTCTTGTAATAGGAGAATATTCT
CCAAGCAGAGGCTTCGGAGAGAGGTAGTTTTGTCCGGGATTTTTAACGTT
CCTCTCCTCTCCATAGATGTGTGTAGAGCGACAGTGATAGCAGTTAGGGA
CAGCAAAACACAACTGTTAGGTTGCACTTAATAAATGTCCCACATCAGGC
CACATAAAAAGACTTTAGACGTTAAAATGATGGCCGAGAAAGGAGTGATA
GCGAAATTACATAAATGACACACATATCATAATAGAAGGCATGAGAAGTC
ATCAAACATATCAAGATTCAAACACTGACAACACGACCACGCCACCTGCT
AAATTTACCAGAATAAACGAGGTACCCCCAACTATTGACTCAAAGATGAC
ACACGGTGCCAAGCGTACGTGTACCTCCGTGTTGCTTTGCGCGTGCCGTA
CTTTTATTACCCATATATGCTAACCTTCCTGTGCCCCCCCCCCCAAGCTT
CCCGGCACACTATGACAACAACGTGGACTGTACATGGACCCTGCCTCCCC
GTGATGGGACGACCGGTGTCACCGTCACCTTCACCGAGTTCATGCTGGAG
CACGTGGAGGAACACGAGCTGGGGCAGTACACAGGCTGCATCTACGACTT
CGTGGAGATCTTCGACGGCCCGAATCGACTCGGTTAGTCCACGGAAGTTC
ACCAGACTACTGAATGATTTGAAAAGATTTGGAACAGCTTCAAACTAAAC
ACCGTCTCTTGAGTGTTGGGGCGGAAATCGGCATGCTTTTGGTCATATAT
TTACTATCAGATTAGCTTTGTCCCGTATTTTAATTCATCCTATATTTTTC
AAAGAAAAAGGACTGCTCTGCAAATCTTTAACGCCTTAGACATGAATCTA
ANAACGCCTTAGACATTAATCTAAATCGCCAGTTTTAGGTACGATTCTAA
CGTTACATGTGTCACTTCTATCTGAGTTGTATGCGCGCAAGCGTTTTATT
GACTAGGTCAACATTTAATCTTTTTTAACTGTCCCCTCTCCCCGTAGGCC
GGTGGTGTGGTGATAAGGGTCCAGACCCAGTCACCTCCGCTAACGGACTG
AAGGTCCGCTTCAAGACGGACGCCCATACAGTGGACTCAGGATTCAAGTT
CTCCTACCAGTACAGCAC Coding sequence (CDS) from alignment at Sc0000073:1077218..1085635+ >transcript:BL97391_cuf7 ID=transcript:BL97391_cuf7|Name=transcript:BL97391_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=846bp|location=Sequence derived from alignment at Sc0000073:1077218..1085635+ (Branchiostoma lanceolatum)
GGGGACTGCGTCTTCCCGTTTGAGTACGCCAACAAGACGTACGACTCGTG
CACAACGGATGACAACGACGGCTTCGCCTGGTGCTCCATGACTCCGCTGT
TTGAAGACAACTGGGTGTACTGTGAGAGTGGTGGGTGCGGCGGCGCCTTG
ACGGACCGCCAAGGACGAGTGGAGTCGCCCAACTACCCCGTCGGTTACCC
CGACAACCAGGACTGCAAATGGCTGCTCCAGCCGCGCGGAGGCCATGCCA
CCATCAGCTTCGGCGACTTCAACCTGGAGGCCAGCGGCAGCCTGTTCACC
TCCTGTCCGTTTGACTATGTCCAAGTCACTGCCTTGGACGGTACAGACAC
CGGGCAGCGCTGTGGGACGGACACCCCTGCAAACGTCAGCTCCCATACAG
ACATAACTGTCCACTTTGTGACGGACGCCAGCATCAACAGTCGCGGGTTC
TACTTCGACTACAGCGTGTTGGGCGGCGCGCCCGGGACACAGGCGTGCGG
AGGAGAAGTGACAGGGAACAGCGGCGAGGTCGCATCATCTGGCTTCCCGG
CACACTATGACAACAACGTGGACTGTACATGGACCCTGCCTCCCCGTGAT
GGGACGACCGGTGTCACCGTCACCTTCACCGAGTTCATGCTGGAGCACGT
GGAGGAACACGAGCTGGGGCAGTACACAGGCTGCATCTACGACTTCGTGG
AGATCTTCGACGGCCCGAATCGACTCGGCCGGTGGTGTGGTGATAAGGGT
CCAGACCCAGTCACCTCCGCTAACGGACTGAAGGTCCGCTTCAAGACGGA
CGCCCATACAGTGGACTCAGGATTCAAGTTCTCCTACCAGTACAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000073 | genome | Sc0000073:1077218..1085635 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97391_cuf7 |
| Biotype | protein_coding |
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