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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97400_cuf24 >transcript:BL97400_cuf24-protein ID=transcript:BL97400_cuf24-protein|Name=transcript:BL97400_cuf24|organism=Branchiostoma lanceolatum|type=polypeptide|length=547bp
MSGGGGGGAHGWSMSGGGEGAAGGGGGAAGRGGAAGEAHGFSMSGGGEGA
AGGGGGGGAAGRGGAAGEAHGFSMSGGGEGAAGRGGAAGGGGAAGEAHGF
SMSGGGEGAAGRGGAAGGAHGWSMSGGRGGAAGRGGAAGEAHGWSMSGGG
GGAGGGAHGWLSGGGAAGGAGGRGGGSWSWSSSGGSIFEGLAEGASVSLK
QYFQFGWFSASSVLDEQHGAGYAVIGKTYDDGSAAYWAPATNDANQYLQI
DLGGIFQIFSVTIQGAAGRWVQTYRLQYSTDGTTWTTYQDDDGQDITCEG
NGDDSGIQVETLRSVISARFFRIVPLTWGGEGIAVRLDMNAVGGGGSFGG
AAGGGMSMSAAGGAVAGGAAGAAAAGAAAAGAAAAGGMAAGGLIGGVAEG
ASVSLLRYFQFGWFSASSVLDEQHGAGYAVIGKTYDDGSAAYWAPATNDA
EEYLQIDMGRVYQLYSVTIQGAAGRWVQTYYLRYSADGTTWLTYQDGDGQ
DITCEGNSDDSGTQVLTLESVIMARFLQIAPLTWGGDGIALRLDIDV Run BLAST on NCBI mRNA from alignment at Sc0000260:158126..163292- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97400_cuf24 ID=transcript:BL97400_cuf24|Name=transcript:BL97400_cuf24|organism=Branchiostoma lanceolatum|type=mRNA|length=5167bp|location=Sequence derived from alignment at Sc0000260:158126..163292- (Branchiostoma lanceolatum)
GTAGTCTCAGTTGTCTGCAAGCTAAATCATGGCAATGGCACCTCACGAAG
GAAAGTTGCAATGTTCGTAGAAGCTTGTTTGAAGGAAGGTGTCAAATTGC
ATATTACATACTATAGTACGCAGGTAAGTCTACTTTCGTGGAGGTTTGCG
TTCTCGAAATACTACGTCTACCTCACTAACACTCACTATTACTGTGCCTT
AAAAAATCGGGCCATTCTGATGTAAAATGGAAATGTAATGTCCAACACAA
AAGAATTAGATTCCAAATGTTCGACTGTCCAACTTCAATCTTTGTCAAGG
AACGAGCAATATAACAAAATCTTTTTTTTTTGCAAGAGGAGTGAAAGAAG
CCTTTTGCATCCATCCCTTAACACTTAACCGGGACGGGTGGCGCCATAAA
CGTTCTGCAACTTATGATTCAACCCTCGCAGAGTCAAATGCCCTATCTGC
ATAACGTGACGTCACAAAAGCAGTGTATTGTTCATTCCTGTAATAACAAA
GACTGGAGTTGGTTAGGAGGAAAGTCCAATTTTTGTGCTACAGTTCATCT
TTACTTCATGATTTCTGCTAACACAGATAAACTTGGGGTCATTTCCCACC
AGGTCATGGCATGTCCGGAGGGGGAGGAGGAGGAGCACATGGATGGAGCA
TGTCCGGAGGAGGAGAAGGAGCTGCAGGAGGAGGAGGAGGAGCTGCAGGA
AGAGGAGGAGCTGCAGGAGAAGCACATGGATTCAGCATGTCCGGAGGAGG
AGAAGGAGCTGCAGGAGGAGGAGGAGGAGGAGGAGCTGCAGGAAGAGGAG
GAGCTGCAGGAGAAGCACATGGATTCAGCATGTCCGGAGGAGGAGAAGGA
GCTGCAGGAAGAGGAGGAGCTGCAGGAGGAGGAGGAGCTGCAGGAGAAGC
ACATGGATTCAGCATGTCCGGAGGAGGAGAAGGAGCTGCAGGAAGAGGAG
GAGCTGCAGGAGGAGCACATGGATGGAGCATGTCCGGAGGAAGAGGAGGA
GCTGCAGGAAGAGGAGGAGCTGCAGGAGAAGCACATGGATGGAGCATGTC
CGGAGGAGGAGGAGGAGCAGGAGGAGGAGCACACGGCTGGTTGTCCGGAG
GAGGAGCTGCAGGAGGAGCAGGAGGAAGAGGAGGAGGCAGCTGGAGCTGG
TCTTCATCAGGAGGAAGTATCTTTGAAGGCCTTGCTGAGGGAGGTAAGAC
ATAGAGACATAGAAACGAATTGATAACTGTTTTGCTAGACGAAAGGATCA
ACAAGTAGGGTTATCTCAGCTATTAGAGGCGTCGATAATTCTAGTTGTAA
TTTCTTTACATAGATCTATATAAAGAAATTACAACTTGTCGGCCTCTCGT
TCCACAGCTTCGGTGTCGCTGAAGCAGTACTTCCAGTTCGGATGGTTCTC
GGCGTCTTCCGTTCTCGACGAGCAGCACGGTGCCGGGTACGCCGTGATCG
GGAAAACATACGACGACGGTTCGGCCGCCTACTGGGCTCCCGCTACAAAC
GACGCGAATCAGTATCTCCAGATTGATCTGGGGGGAATCTTTCAAATATT
CTCGGTGACCATCCAGGGTGCAGCCGGGCGCTGGGTTCAGACGTACCGCC
TGCAGTACAGCACTGATGGCACCACGTGGACGACCTACCAAGACGACGAT
GGTCAAGACATAGTAAGTATAGCAACAGTATAATCTCTTAGCCTCCACCA
GTCCTCCCTTCGGTCGTATGGATCCTAGAATAGATGTCTTTTCCTAGTTA
GAATCTTGGCCTCCTTTGGCCTCCTTGCAGAGTTTTCAGTCGAACATTTT
GCCATCTTCAGGTGTAAGGACGCTTAGCTGGTAGAAGGACGCTTAGCTGG
TGGAAGTACGCTTAGCTGGAGCATGTTTACATTGCTCTATTCATGTTACT
TCTCATGATAAAAAGAGGAATTCGAAATGTGACATGGGCACTGAAGTCAC
GTGAAACCATTATTCTACAAAATACAAAAAATTAGATATTTTATCCCATA
TCTTACAGCCTTGTTAGGCATAAGTATAATATGATAACATTCTCTAACAC
ATACGAGATCTTATGGTAACGATTTATAGACTAGTCCTTTAGACTATGAT
ACAAATAATGTTATATATCCTAACGGTTTTCAGTGGCAAATGTGCTAGAT
GTTGGCACATCGGCAACCAAATCCGCAGTGTGTTTTTTGGCGCACAGTTT
GACAGATTAGCCGAATAGCCTCGGTGGGCGTGACTCCACCGTCCGGGAAG
GTAGTGTCAAGTGCCTTTCCCAAGGGCACAACGTCGGGGCATGGTGAGTA
TCGAACTCGGGACCTATTGATTCCGAGTTCAACGCTCTAAACGTTACGCC
ACGCCGACGTCACGTAATACGTGATACAAATAAGAACACTATAAAGTCTA
TTCATGCTCTTGTTCCAGACCTGCGAAGGCAACGGTGATGACAGTGGAAT
TCAGGTCGAGACTCTGCGATCGGTCATCTCGGCTCGTTTCTTTCGTATCG
TCCCCTTGACGTGGGGGGGAGAGGGTATCGCCGTACGTCTGGACATGAAC
GCCGTCGGTGGTAGGTACTCATATTGTTACTGAATATGAGATACTTTTGT
CAACTTACGTTGGATTTGATAGTGTTGTGTTTATAGACAATAGACTTAGT
CAAGAAATGTGCAAAAAATGTCAAAGCAGGACACTTTTATATTATACCTG
ATGTCATGTAAGAACGAACATATAATAGACAAAGTATGTAGTCATGTTTC
CAAATGTTTCAAAAAGAGAGAAGAAAGTACTAGGTGATCAACATTATTTT
AGCAATAGTCCACAGTTTGTCTGTTGTTAGTTTTTTCAATGTTAGAATGT
AGTATCTTATCAATTCATATTTTGCATTATGCTTCGTATAGACCACATGT
GGTCATTTGTGGATTTAGCCCATTTGGGCGGGAATATGCAATAAAGACTA
TTATATTATATTATTTATATTTTCCGGTTATGACATGTGAATTGCAGTTG
GCATCGCTTAGATAAGCCGTTCTTTACATTGCTCTATTAATGTTGCTTCT
CATGTAAAATAAAAAGAGGAATTCGAAATGTGACATTGGCACGGAAGTTA
CATGAAACAATTATTTCTTTTATTATTCTACAAAATACGAAAAATATAGA
TATTTTAACTCATATTTTACAGCCTTGTTTGGCATTTTTGTAAACTTCGT
GCTACAATGTTGTTGTGTAATGTTGATTGCAGTCATACAATCTTGGTCTG
TTTTGTTAGGTGGAGGTAGTTTTGGAGGCGCTGCGGGCGGAGGCATGAGT
ATGTCTGCTGCAGGTGGAGCTGTTGCAGGTGGAGCTGCAGGTGCAGCTGC
TGCAGGTGCAGCTGCTGCAGGTGCAGCTGCTGCAGGAGGGATGGCTGCAG
GAGGTCTTATTGGAGGCGTTGCTGAGGGAGGTAAGAAACAGTTAAGCCCC
CCTCTCACTGGACCCGTGGCACGCTGGCGGCGTCGCTGCGGCCGATCGAA
TTGACAAAGCACTCAACGAATGTCATCAACAAAAAACGAATCTTTTTAAG
CTTTGTGTGTTTTGTTGTCTTTTGGTCATACTTGTACGTTTTGCACGATA
TTCCTATTATAAAGTCAAGGGTATACGTAACACAAATTCAGTTAAGGACG
CAGCGATGCCGCCAGCTCTACGTGCTATCTATTCCCTGAGGAGGTTCTAC
GTGTCCTTGGTCGTCATTAGGGCATCGTGAAAGGCACAACTCCTCCAATC
TCCCTCTAGCTTTCTCCGGCCGTAGACATAAAGGCCCAATCAAAGTTGAT
AGAATTACTAAACGTTTAGTTTCCAAACAGATACATCTGATCTAGCCCTT
GCCGAGGAAGCGGTGATGATTTGAAGAAAAAATGCCCTAGAATTTGTGAT
TTCAGAATTGTGTCAGTGATGAACGGACATGCATGTGTTAAAAGCAACCA
AAGCAATATTAGGGCAAAAAAATGGAAATACGAAAACGCTGAAATCTTCA
TGGTAGTGACATTTACTAAAATCGTGCCGCACAATGATTCCCTTAGCTTC
GCGAGCCTACAAAAACTCTGGCCACGATTTTCAGTGAGTTCTCACATCAC
AACAACGTCGTATTTCTGCATCATGAACGTTGCTATATATTGTGATAGTG
TTGTTTGAACTAATCATGTATAGAAATGACTAGACAAATTGACTTTCAAA
ATCCGGCCCTAATATTCCTTGGGATTCCTTTAATGTCTCTATCCACAGCT
TCGGTGTCGCTGCTGCGGTACTTCCAGTTCGGATGGTTCTCGGCGTCTTC
CGTCCTCGACGAGCAGCACGGTGCCGGGTACGCCGTGATCGGGAAAACAT
ATGATGACGGTTCGGCCGCCTACTGGGCTCCCGCTACAAACGACGCGGAG
GAGTACCTGCAGATTGACATGGGACGAGTGTACCAACTGTATTCGGTGAC
CATCCAGGGTGCAGCCGGGCGCTGGGTTCAGACGTACTACCTGCGGTACA
GCGCCGATGGCACCACGTGGTTAACGTACCAGGACGGCGACGGTCAAGAC
ATAGTAAGAGTCACAACAATACAATAAATGTAAAGTTCCAGCAACTGCTG
TATAGAAACATGTGTGGCATACTTCCTAGATTCTATGAGGTCCATTGCTT
GAGAAAAGTCACACCCCGGACGCGTTAAAGAATCCACTTCACTTATAGAA
AATGATATTGGGTCCATTCCATGTTCGCGGTGGCAAAAATGTAAAGTCCG
ATGGCCACACCTTGGGAAATAACTGTCGTACTGAGGTCACTAGAGCTATT
TAAAGGCTGCCAATATGTCCCACCACCTGTAATCTCAAGTCAAGTCAAAG
CCTTTATCTAGCCTCTTGCTACAGATAGAGCGTAGTCAGCCCACCTAAAT
TTGAAAACAACAACAACATATGAATCAATCATGATAAATATGCATAATCC
TGAGATATCTCTACCATATTGATTAACAAACAGTTGAAAAAATTCCGTAA
ATTCTACTCACATGTTGTTGCTTATTCTCCAGACTTGCGAAGGAAACAGT
GACGACAGTGGGACCCAAGTGTTGACCCTGGAGTCTGTCATCATGGCCCG
CTTCCTTCAGATCGCTCCCCTGACCTGGGGTGGAGATGGTATCGCCCTCC
GGCTAGACATCGATGTC Coding sequence (CDS) from alignment at Sc0000260:158126..163292- >transcript:BL97400_cuf24 ID=transcript:BL97400_cuf24|Name=transcript:BL97400_cuf24|organism=Branchiostoma lanceolatum|type=CDS|length=1641bp|location=Sequence derived from alignment at Sc0000260:158126..163292- (Branchiostoma lanceolatum)
ATGTCCGGAGGGGGAGGAGGAGGAGCACATGGATGGAGCATGTCCGGAGG
AGGAGAAGGAGCTGCAGGAGGAGGAGGAGGAGCTGCAGGAAGAGGAGGAG
CTGCAGGAGAAGCACATGGATTCAGCATGTCCGGAGGAGGAGAAGGAGCT
GCAGGAGGAGGAGGAGGAGGAGGAGCTGCAGGAAGAGGAGGAGCTGCAGG
AGAAGCACATGGATTCAGCATGTCCGGAGGAGGAGAAGGAGCTGCAGGAA
GAGGAGGAGCTGCAGGAGGAGGAGGAGCTGCAGGAGAAGCACATGGATTC
AGCATGTCCGGAGGAGGAGAAGGAGCTGCAGGAAGAGGAGGAGCTGCAGG
AGGAGCACATGGATGGAGCATGTCCGGAGGAAGAGGAGGAGCTGCAGGAA
GAGGAGGAGCTGCAGGAGAAGCACATGGATGGAGCATGTCCGGAGGAGGA
GGAGGAGCAGGAGGAGGAGCACACGGCTGGTTGTCCGGAGGAGGAGCTGC
AGGAGGAGCAGGAGGAAGAGGAGGAGGCAGCTGGAGCTGGTCTTCATCAG
GAGGAAGTATCTTTGAAGGCCTTGCTGAGGGAGCTTCGGTGTCGCTGAAG
CAGTACTTCCAGTTCGGATGGTTCTCGGCGTCTTCCGTTCTCGACGAGCA
GCACGGTGCCGGGTACGCCGTGATCGGGAAAACATACGACGACGGTTCGG
CCGCCTACTGGGCTCCCGCTACAAACGACGCGAATCAGTATCTCCAGATT
GATCTGGGGGGAATCTTTCAAATATTCTCGGTGACCATCCAGGGTGCAGC
CGGGCGCTGGGTTCAGACGTACCGCCTGCAGTACAGCACTGATGGCACCA
CGTGGACGACCTACCAAGACGACGATGGTCAAGACATAACCTGCGAAGGC
AACGGTGATGACAGTGGAATTCAGGTCGAGACTCTGCGATCGGTCATCTC
GGCTCGTTTCTTTCGTATCGTCCCCTTGACGTGGGGGGGAGAGGGTATCG
CCGTACGTCTGGACATGAACGCCGTCGGTGGTGGAGGTAGTTTTGGAGGC
GCTGCGGGCGGAGGCATGAGTATGTCTGCTGCAGGTGGAGCTGTTGCAGG
TGGAGCTGCAGGTGCAGCTGCTGCAGGTGCAGCTGCTGCAGGTGCAGCTG
CTGCAGGAGGGATGGCTGCAGGAGGTCTTATTGGAGGCGTTGCTGAGGGA
GCTTCGGTGTCGCTGCTGCGGTACTTCCAGTTCGGATGGTTCTCGGCGTC
TTCCGTCCTCGACGAGCAGCACGGTGCCGGGTACGCCGTGATCGGGAAAA
CATATGATGACGGTTCGGCCGCCTACTGGGCTCCCGCTACAAACGACGCG
GAGGAGTACCTGCAGATTGACATGGGACGAGTGTACCAACTGTATTCGGT
GACCATCCAGGGTGCAGCCGGGCGCTGGGTTCAGACGTACTACCTGCGGT
ACAGCGCCGATGGCACCACGTGGTTAACGTACCAGGACGGCGACGGTCAA
GACATAACTTGCGAAGGAAACAGTGACGACAGTGGGACCCAAGTGTTGAC
CCTGGAGTCTGTCATCATGGCCCGCTTCCTTCAGATCGCTCCCCTGACCT
GGGGTGGAGATGGTATCGCCCTCCGGCTAGACATCGATGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000260 | genome | Sc0000260:158126..163292 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97400_cuf24 |
| Biotype | protein_coding |
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