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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97432_cuf0 >transcript:BL97432_cuf0-protein ID=transcript:BL97432_cuf0-protein|Name=transcript:BL97432_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=875bp
DARPEIVSLGCWRDKADRAIPTMEGSDARLDGSYPARQDAINKCRKLTEA
RGFNTFALQNGGWCASSATAAQTYRKYGPSTSCATDGEGGPWGNQVYQIT
GPSACEAPLDLFLLLDGSGSVGTANFDKVKQFAADVVNSFDVSPTATRIG
VAQYSDRNSLVFNLGDKADKPSTVSAINGVAYQSGGTKTGAALQHVRDNA
AWRGGDVPKVVIVLTDGKSGDDVAAAAQSLAADGVKVYAIGVGNFDHGEL
IQIANNDQNNVIELNNFDALATKIDEIAKVVCSYVSDACPSGYNGHGGIC
YKAFNAKKTFLQAAKACYADGGTLAMPRDAATNDFIKSLKDAIDPSGFFW
FGLVDQHKENEWVWIDGRPLGSFSDWKPGEPNNLGDEDFAEYFPTQWNDV
GGNAKNRRFICQVIPIDCPEGYVYHQPSRTCYKAFDAKKSYDGAVEACSA
DGGSLAMPRDDATNVFLIYLKNAVDNRGWFRFGLTDEHQEGGWMWSDGIA
LGSYEPWGPGEPNNLRNEDCGEYFPGSRPKKTRNKWNDGPCPNKNRKFIC
QFIPKGCPKGYKQSGASCYKAFDTDKNYDEAAKVCRNEGGSLAMPRDKVT
NDFLINLKNKVDSTSWFWLGADDKNDEGTWRYXDDKNDEGIWRYIDGEPF
GSFSDWSPGEPNQAGGNEDCLVLFESPRDNWNDQGCATKQKFICQIHLPI
HDSCGGNVPGEFGVIVSPGYPVTQTEHRKCSWNFMARPGKVVTLIFEDFD
LESTLDTVTVEDPCSDTELGKFSGTTLPPPVHSSDKQARVVLTIGTTDRS
VPGRGFRFKFIATPSSAKRGVDEPLSAQQPDETLQGRGQEEADRNTNQEM
LMETLKILEEDLRNAGNELEYNHEE Run BLAST on NCBI mRNA from alignment at Sc0000061:1094885..1101819- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97432_cuf0 ID=transcript:BL97432_cuf0|Name=transcript:BL97432_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=6935bp|location=Sequence derived from alignment at Sc0000061:1094885..1101819- (Branchiostoma lanceolatum)
CAGATGCCCGGCCGGAGATTGTAAGCCTCGGCTGCTGGCGGGACAAGGCA
GACAGAGCCATCCCAACCATGGAGGGGTCGGACGCGCGTCTGGACGGGAG
TTATCCGGCTCGTCAGGACGCGATCAACAAGTGCCGCAAGCTGACCGAGG
CTCGAGGTTTCAACACCTTCGCGCTGCAAAACGGAGGCTGGTGCGCTTCT
TCAGCCACCGCTGCTCAAACCTACAGGAAGTACGGACCGTCCACAAGCTG
CGCTACGGACGGCGAGGGCGGGCCATGGGGGAACCAGGTCTACCAAATCA
CAGGTTTGTGTATCTTTACTGATGAAGGAAACTGTCCACGAATCTGTCCT
CGACCGGAGTAGTTCAATTTGTTGATGTTTTTTGCCTTAATTATATACCG
TTTGCTATCTAAATGGATGATAGCATGCGCAATTTGTACGTCCAACCAAC
CAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCA
ACCCAACCCAACCCAAACCAACCCAACCATCAAAACTTACTATTGCTTTA
GAGGAAGACAATTGATGAATGTAGATTCAATGAATTCTTCAATCATATAG
ACGGATATATGGATGTCACTTATGCCTAACATTTCTCCTTGTAAAACTCT
ACTAGGACCGTCAGCATGTGAGGCGCCACTGGATTTATTCCTACTTCTGG
ATGGATCTGGCAGCGTAGGGACTGCAAACTTCGATAAGGTGAAACAGTTT
GCTGCCGATGTGGTCAACAGCTTCGACGTAAGCCCGACTGCCACCAGGAT
TGGTGTAGCACAGTACTCTGACAGGAACTCGTGAGTGTCTGGCCTTTTAT
ATCTATTATTATATCTATCTATATCTATTATGTCTAGGGCCTTGGACCAT
GGACTATAGNAGGGCCCTGGACCATGGACTATAGGGCCCTGAACCGTGTA
ACATAGATTAACCTATTCTTTCGGAGGGGAGTAAGTGGCCAGTTCCTGGC
AGGTAGGCAGATTATGTGTATCAATCTGGCAGTGACAGTCTCTAAACCAT
TCATTTCTCAGCCTGGTGTTTAACCTGGGAGACAAGGCCGACAAGCCGTC
CACCGTGAGCGCCATTAATGGTGTCGCGTACCAGAGCGGCGGCACGAAGA
CCGGGGCTGCTCTACAACACGTCCGTGATAACGCAGCATGGAGGGGCGGC
GATGTCCCGAAGGTACGTACCGAAATGTAAAGATATTTGATATAGTGTAT
AGATACAGTTGTTGCTGTTGTTGTTGTTGTTCACCTTGTAGTGCCTGGTG
CACATAGGTTAGCAAGTTTCCTTGCTGTTCCAGTAGTAAGGTATATTTTG
CAGGGAGGGGTTGCTAGCCCTTCCCTTTAACGGGCGTCAAAAAAGCTCTT
GGGACCACTATTTTACGTCCGTTCCTGATCACGACAGTCACACGGGCGTA
TCTACTTACTCCCACAGGTGGTGATCGTGTTGACAGACGGAAAGTCCGGT
GATGACGTAGCGGCGGCTGCTCAGAGCCTGGCCGCCGACGGAGTGAAAGT
GTACGCCATCGGAGTGGGAAACTTCGATCATGGGGAGCTCATTCAAATTG
CCAACAACGATCAAAACAACGTAATCGAGTTGAACAACTTTGATGCCCTG
GCCACGAAGATTGACGAGATTGCCAAAGTTGTCTGCTCATATGTGTCAGA
CGGTATGTTTCGATTTAATACTTACAGGGTTAGCTGTTATACATCTAAAT
ATAGTAAAGTAAAGCCAGTAAAGTAAAGTAAAGCCAGTAAAGTAAAGTAA
AGTAAAGTAAAGTAAAGTAAAGTAAAGTAAAGTAAAGTAAAGTAAAGTAA
AGTAAAGAAAAATGAATAATAAAAAGATAAACACAGCAAAATACATTTTT
CAGCTTGCCCTAGTGGCTACAATGGCCATGGTGGGATCTGCTACAAGGCA
TTCAACGCGAAGAAGACCTTCCTCCAGGCGGCTAAGGCTTGTTACGCGGA
TGGCGGCACCCTCGCCATGCCCCGGGATGCCGCCACCAACGACTTCATCA
AGTCCCTGAAGGACGCCATAGACCCGTCCGGTTTCTTCTGGTTCGGTCTG
GTGGATCAGCACAAGGAGAACGAGTGGGTTTGGATAGACGGCCGGCCCCT
CGGCAGCTTCAGCGACTGGAAACCGGGAGAGCCAAACAATCTTGGCGACG
AGGATTTTGCCGAGTACTTCCCTACACAGTGGAACGACGTGGGCGGCAAC
GCAAAGAACAGGAGATTCATCTGCCAAGTGATTCCAATCGGTACGTCATC
AAAATGCCTGTAACGTTTAAGGCACATTTTCAGTTCAAATGACTACGAGT
TTGCATTTAGAACAGGTTATTAATAACGTTACAGTTACGCTTTACAGTGC
GTTTAAAACGACGAGTACGTTGGTAGCCCGTCTAACTTTCCCCCATATTC
TATTGATGCAGATTGCCCAGAAGGCTACGTGTACCATCAGCCAAGTCGCA
CGTGCTACAAAGCCTTCGACGCCAAGAAAAGCTACGACGGAGCAGTTGAA
GCCTGTTCTGCAGACGGCGGTTCCCTCGCCATGCCCCGTGATGACGCCAC
CAACGTGTTCCTCATCTACCTGAAGAATGCTGTCGACAACAGAGGCTGGT
TCCGCTTCGGGCTGACCGATGAGCACCAGGAAGGGGGGTGGATGTGGTCG
GACGGCATCGCCCTGGGGAGCTACGAGCCGTGGGGTCCGGGAGAACCGAA
TAACCTGAGAAACGAGGACTGTGGCGAGTACTTCCCTGGAAGTCGCCCTA
AGAAAACAAGAAACAAGTGGAATGACGGGCCATGTCCCAATAAAAACAGG
AAGTTTATCTGCCAATTTATCCCGAAAGGTACGTTTGACAACAGTAGTTT
CTATTGTTTAGATTACAAATCAACACGAGCCAATACCTTTAAATGAGTTT
CCTGCATTTGACGGAGAATCCCTATAATGTGCACGACTACTTTCTTTCAT
CGTCTTCTGTAGGATGTCCCAAAGGGTACAAGCAGAGCGGTGCTAGCTGC
TACAAGGCCTTCGACACTGACAAGAATTACGACGAAGCTGCGAAGGTTTG
TCGGAATGAAGGAGGGTCTCTGGCCATGCCTCGTGACAAGGTTACTAACG
ACTTCTTGATCAACCTGAAGAACAAAGTGGACAGCACTTCGTGGTTCTGG
CTCGGAGCGGATGACAAGAATGACGAGGGTACATGGCGGTACANGGATGA
CAAGAATGACGAGGGTATATGGCGGTACATCGACGGTGAACCCTTCGGGA
GCTTCAGCGACTGGTCCCCGGGCGAACCGAACCAAGCCGGCGGGAACGAG
GACTGCCTGGTGCTGTTCGAAAGCCCCAGGGACAACTGGAACGACCAAGG
CTGCGCAACAAAGCAGAAATTCATCTGCCAGATCCATCTGCCAAGTAAGT
TTACCATTTGAATTGACAGGGATTGGGCTATTCATGGCATTTCGGAACAG
ATATCACACGAGACACAAACGAAGATATAAGTTTTAGACTGTACTAATGT
CTTTCCAACAGACCATGTAACATAACATGCTTAGTATCTATTCTACTATT
AAGCTTTAGGGCATTCTAAAGATTTGTCTTTTTGTAGTCTTGCAGCTGTA
AGACTGACAAATGACTTTGAAATGCCATTTTGTTTCTAATATGCTCGTTA
AATCTTTCATTCCAGTCCATGACTCCTGTGGTGGCAATGTTCCCGGAGAG
TTCGGAGTGATTGTCTCACCGGGCTATCCGGTGACACAAACAGAGCATCG
GAAATGCAGGCATGTTACTTGTTATTTTTTATTATCATGCCAGAGAAACC
TTAACTAGACACCGTTCTAGATCTGTTCTTTTAAAGAGGTTTTACTTATG
AATTAAAAATGAAGTGATTTGAATGTCATCTTGCAGCTGGAACTTCATGG
CTCGACCAGGGAAGGTTGTGACCCTGATCTTCGAGGATTTCGACCTGGAG
AGTACCCTCGACACGGTGACCGTTGAAGACCCCTGCAGCGACACGGAGCT
GGGGAAGTTCTCTGGGACCACTCTTCCTCCACCTGTCCACAGCAGCGACA
AACAGGCCAGGGTCGTCCTCACCATCGGCACCACCGACCGCTCTGTCCCT
GGACGTGGTTTCAGGTTCAAATTCATCGGTATGTTAGAAGATCTTCCCAA
AACGTTACCGGGCGAACTCATAGTTTGTGGTTACAAACTACCTACCTAGT
CCCTACTACCTACTAACGTAATATGACCAATTAACGTCCGATTTATTCAA
AACGTATTTATCTTAAAACCGCGCGGACAGAGCCAAATTTCAAACCCATG
GGCAGAAATATCAGCTCTTCTAAAAAGAAAATGGATGGTATGTAAGTTTT
TCTCCGCCTGTTTAAAGCCGTGCGAGCATGTATTTATACTGAGGTATATG
ATGAAGAATTGTGCTAGGGTAACCCATTATCGTCCACTTCTGAATCTTTT
CCCTTCTAGCGCTATGCTTGAAGAACATAGACCAGAAAAAAAATGCACAG
TAACTGTCCAAAGTAGTCTGCAGACAAATGAAAATAATATCATAATATAA
TGTCTGTCCGGCCACTTGCTTAACGCGATGGAAAAAAAACAATGTTTATC
TGTAACTTTCCCCCACACGCGCGGCACGTGGCGTTCACGTGGTAAACGCA
TGGCCATTATATTTTGCTGTGCAAAAATTAAAGAGATGGCTAAGGATCAT
ACTTATGATGTTCTTTATTGCTCATGAGAACAGGCTTTGGCATAATACAC
CGCGACATGTGGACATGAGCCAAACCGGACGTAAATAGGTTCTGCACGTA
AATAGGTCATGTTACGTTANACCGCGACATGTGGACATGAGCCAAACCGG
ACGTAAATAGGTTCTGCGCGTAAATAGGTCATGTTACGTTACCTACTACC
TGCCTAGTCCCCACTACCTCCCTACCTGCTATCTACCTACCTACCTACCT
ACCTACTTACCTAATCAAAGTTCAATATTACTGAACTTTGGTTAAATCAA
TATAACCTCATATCAATATTGTATACAATATCAAAGTTCAATAACCAATA
TTATCTCATACTCTTTATCAAAGTTCAATAACCAATATTATCTCTTTATC
AAAGTTCAATAACCAATATTATCTCTGTTCTCTACAGCCACACCCTCTTC
TGCTAAACGAGGGGTTGACGAACCGCTGTCTGCCCAGCAGCCCGATGAGA
CCCTGCAGGGGCGTGGCCAGGAGGAGGCTGACAGAAACACCAACCAGGAG
ATGCTGATGGAGACCCTGAAGATACTGGAGGAGGACCTGCGTAATGCTGG
CAACGAGCTAGAGGTACGATTGACAGATCTACATCAAACAGAATATCTAG
CCTCTACCAGGCTCCATCGGTCGCTGAAAACATGTCAGAGGAGTTAGCCG
AGAACTTGGGTCGCAAACTGTACTTCCAGACCGGCTAAATCCCCTGGCGA
TGTTTTCTGTACATGTCTATTTGGCCAACCTCTACTATGTTACGGTGACC
TACGGAGCCTGGTAGAGGCTATCAATACCTATCAATTCAGCAAATTGGAT
TGCTAAAGTTGAAAGATTGATTCATCTTTTGTACTACTCAACCGGGATAT
CGATATCAGAAGGAGCGTTTCCATTTTAATCGATTTTACCCTTTCGCAAG
TTAAGAAATTCATTGTAGGATATTGCGCCTTTCCGCGTTGGCGCGCAGTG
AACTCATTCAAAATATTTGACAGGGTAAAAAAACAACTTTATCAACAATT
ATTTTCCTACAGACCCCTGTGTGGCAGATCTTTAAGTTACTGTATGTACA
TATCCACACTAACCCGTTTGCATTATATGCAACCTTAATGTTCTATATGT
GGTCTAAGCTTGTATTAACTCAAACCACTTGTTTCTCCTTCTGTAGTATA
ATCATGAAGAGTGACAGCAAGTGACGACAACTGGACCACAAAGGCAAAAC
CAATCATCAGAATACAGGAACACAGGACAATATAACTGCTTAGCAAGATG
CTTCAGTAGGGCAAAGACAACATCAGAAATGATAAAGAATAGTAATCATG
GAAATCAAGAGTGTTCATCTGGTATTTTCTTTGTACTTGTAACGTTAATA
CTATGGCTGAAAACATCAACGTAATTAACAAGTGCAAATGTCAATCATCT
TTCTTTTATCTTCCAGGAGCAATATCAAATTATTTTTACTTTTGTCTATT
TCCGGGGTAATTGTGCAATGAAATAAGAACTTTTGTAGGCCTGTTTCTTT
ATTTCTGTTACTAGTAAACTTCTGATTTGACGGTTATGTTGATACTTCCC
CCACAGCGCTATACGCAAAATGTATGACATACCACCAAGAGTATTCTTCA
ACTTTGTAACAACACAGTTAACAGCAACATTCTGGAGGTAAACTTTGCCA
AATACCACATAGTGTATGTAAACACTGCACCAATTTGATGAGGCGTTACA
GCAAATCCTGGGCTTATATATGGAGGGGTCATGGTTCTGAAACCAATATC
ACTATTATTTCGTTGAAATATATCCACCTACTAGGTAACCGGAGACTGTC
AACCAACTTGCTTCTCCAGAGTTTTCCTACTGTTAAACTCAATTGCTTAA
GTTTAAGGAATTTTAATGTCAAAATATAGTAAACGTAGGTAGATACCAAC
CTGTTTGGTAATACGTTATGATGTACAAACGCTTGCACCAACAATTCTAC
TTCATAGACAAAATCGAACTGAGAATCTCTTACCTGTTACAACACAACAA
AGTACATTTTACTTCACTGACGAGGAAAAACACTGGATTCTGATTCTTGA
TACTTATACGGAACTAGATGTTTACTGAAAGGAAATTATTGTCACATATT
CAAGATTGCCATTAAAGCTGCCATTGCAAGTACGT Coding sequence (CDS) from alignment at Sc0000061:1094885..1101819- >transcript:BL97432_cuf0 ID=transcript:BL97432_cuf0|Name=transcript:BL97432_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2628bp|location=Sequence derived from alignment at Sc0000061:1094885..1101819- (Branchiostoma lanceolatum)
GATGCCCGGCCGGAGATTGTAAGCCTCGGCTGCTGGCGGGACAAGGCAGA
CAGAGCCATCCCAACCATGGAGGGGTCGGACGCGCGTCTGGACGGGAGTT
ATCCGGCTCGTCAGGACGCGATCAACAAGTGCCGCAAGCTGACCGAGGCT
CGAGGTTTCAACACCTTCGCGCTGCAAAACGGAGGCTGGTGCGCTTCTTC
AGCCACCGCTGCTCAAACCTACAGGAAGTACGGACCGTCCACAAGCTGCG
CTACGGACGGCGAGGGCGGGCCATGGGGGAACCAGGTCTACCAAATCACA
GGACCGTCAGCATGTGAGGCGCCACTGGATTTATTCCTACTTCTGGATGG
ATCTGGCAGCGTAGGGACTGCAAACTTCGATAAGGTGAAACAGTTTGCTG
CCGATGTGGTCAACAGCTTCGACGTAAGCCCGACTGCCACCAGGATTGGT
GTAGCACAGTACTCTGACAGGAACTCCCTGGTGTTTAACCTGGGAGACAA
GGCCGACAAGCCGTCCACCGTGAGCGCCATTAATGGTGTCGCGTACCAGA
GCGGCGGCACGAAGACCGGGGCTGCTCTACAACACGTCCGTGATAACGCA
GCATGGAGGGGCGGCGATGTCCCGAAGGTGGTGATCGTGTTGACAGACGG
AAAGTCCGGTGATGACGTAGCGGCGGCTGCTCAGAGCCTGGCCGCCGACG
GAGTGAAAGTGTACGCCATCGGAGTGGGAAACTTCGATCATGGGGAGCTC
ATTCAAATTGCCAACAACGATCAAAACAACGTAATCGAGTTGAACAACTT
TGATGCCCTGGCCACGAAGATTGACGAGATTGCCAAAGTTGTCTGCTCAT
ATGTGTCAGACGCTTGCCCTAGTGGCTACAATGGCCATGGTGGGATCTGC
TACAAGGCATTCAACGCGAAGAAGACCTTCCTCCAGGCGGCTAAGGCTTG
TTACGCGGATGGCGGCACCCTCGCCATGCCCCGGGATGCCGCCACCAACG
ACTTCATCAAGTCCCTGAAGGACGCCATAGACCCGTCCGGTTTCTTCTGG
TTCGGTCTGGTGGATCAGCACAAGGAGAACGAGTGGGTTTGGATAGACGG
CCGGCCCCTCGGCAGCTTCAGCGACTGGAAACCGGGAGAGCCAAACAATC
TTGGCGACGAGGATTTTGCCGAGTACTTCCCTACACAGTGGAACGACGTG
GGCGGCAACGCAAAGAACAGGAGATTCATCTGCCAAGTGATTCCAATCGA
TTGCCCAGAAGGCTACGTGTACCATCAGCCAAGTCGCACGTGCTACAAAG
CCTTCGACGCCAAGAAAAGCTACGACGGAGCAGTTGAAGCCTGTTCTGCA
GACGGCGGTTCCCTCGCCATGCCCCGTGATGACGCCACCAACGTGTTCCT
CATCTACCTGAAGAATGCTGTCGACAACAGAGGCTGGTTCCGCTTCGGGC
TGACCGATGAGCACCAGGAAGGGGGGTGGATGTGGTCGGACGGCATCGCC
CTGGGGAGCTACGAGCCGTGGGGTCCGGGAGAACCGAATAACCTGAGAAA
CGAGGACTGTGGCGAGTACTTCCCTGGAAGTCGCCCTAAGAAAACAAGAA
ACAAGTGGAATGACGGGCCATGTCCCAATAAAAACAGGAAGTTTATCTGC
CAATTTATCCCGAAAGGATGTCCCAAAGGGTACAAGCAGAGCGGTGCTAG
CTGCTACAAGGCCTTCGACACTGACAAGAATTACGACGAAGCTGCGAAGG
TTTGTCGGAATGAAGGAGGGTCTCTGGCCATGCCTCGTGACAAGGTTACT
AACGACTTCTTGATCAACCTGAAGAACAAAGTGGACAGCACTTCGTGGTT
CTGGCTCGGAGCGGATGACAAGAATGACGAGGGTACATGGCGGTACANGG
ATGACAAGAATGACGAGGGTATATGGCGGTACATCGACGGTGAACCCTTC
GGGAGCTTCAGCGACTGGTCCCCGGGCGAACCGAACCAAGCCGGCGGGAA
CGAGGACTGCCTGGTGCTGTTCGAAAGCCCCAGGGACAACTGGAACGACC
AAGGCTGCGCAACAAAGCAGAAATTCATCTGCCAGATCCATCTGCCAATC
CATGACTCCTGTGGTGGCAATGTTCCCGGAGAGTTCGGAGTGATTGTCTC
ACCGGGCTATCCGGTGACACAAACAGAGCATCGGAAATGCAGCTGGAACT
TCATGGCTCGACCAGGGAAGGTTGTGACCCTGATCTTCGAGGATTTCGAC
CTGGAGAGTACCCTCGACACGGTGACCGTTGAAGACCCCTGCAGCGACAC
GGAGCTGGGGAAGTTCTCTGGGACCACTCTTCCTCCACCTGTCCACAGCA
GCGACAAACAGGCCAGGGTCGTCCTCACCATCGGCACCACCGACCGCTCT
GTCCCTGGACGTGGTTTCAGGTTCAAATTCATCGCCACACCCTCTTCTGC
TAAACGAGGGGTTGACGAACCGCTGTCTGCCCAGCAGCCCGATGAGACCC
TGCAGGGGCGTGGCCAGGAGGAGGCTGACAGAAACACCAACCAGGAGATG
CTGATGGAGACCCTGAAGATACTGGAGGAGGACCTGCGTAATGCTGGCAA
CGAGCTAGAGTATAATCATGAAGAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000061 | genome | Sc0000061:1094885..1101819 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97432_cuf0 |
| Biotype | protein_coding |
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