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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97458_cuf12 >transcript:BL97458_cuf12-protein ID=transcript:BL97458_cuf12-protein|Name=transcript:BL97458_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=496bp
LGSCSFGATYDAESGQCYCDIQCTYESEPVCGTDGRQYPNRCLLKLVACQ
NQEDIEVNGPPPCDEDDDYVEPEIVGDECPTSCAQQPIDHICGSDGREYG
NLCSLRAAACKEGKNIEYTGPGPCRGTSRTSPGDRACPYIRCFFLYDPVC
GSDGKEYFNRCVMRKSACVQQRDIMVSEGMTPPCNGGPYRLTFSSELSID
NYAEISGDFGGRGKAFTVAFHLRTDSPYSGTIFSYATEEEDNEIQFYGEA
GNRGFKFLVNNDQTDFIDLELIDGSWHVVMVTWRSRRGDWKIYVDGEIRA
SGTGMSVGHTVREGGVWILGQEQDSVGYDFEVFQAYGGDLASFNVWNYVL
SSEERNRASSCSFQGNVVDWHRSTLKLRGDVKRSSYSCGVGQCRYGAVYV
EETGQCQCPQGCPYNYNPVCGSDGRQYANECAMRVAGCTNQQDVYSTGRP
PCNGGTGIAGRPDGRPSSYYPGRESRGYVSLGCWKDRPNTVLADLE Run BLAST on NCBI mRNA from alignment at Sc0000010:3458504..3464464- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97458_cuf12 ID=transcript:BL97458_cuf12|Name=transcript:BL97458_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=5961bp|location=Sequence derived from alignment at Sc0000010:3458504..3464464- (Branchiostoma lanceolatum)
GTTTAGGATCCTGCAGTTTTGGAGCGACCTATGACGCGGAGTCAGGCCAG
TGCTACTGCGACATCCAGTGCACGTACGAGAGTGAGCCGGTGTGCGGCAC
AGACGGCAGACAGTACCCTAACCGCTGCCTCCTGAAGCTGGTGGCCTGCC
AGAACCAGGAGGATATCGAGGTCAACGGACCGCCTCCCTGCGACGAGGAT
GGTAAGTGTCTGCTTTTAATTCAGCTGTAATAATCCAATGAATATCAAAA
CTTTGTCCCGTAGACTCTTTTTACACAACTAAGTGATCCATTCAACCGAC
GTTTCGGAGACCATTTGTCACCTTCATGAAGGCAATTCTGACTAGTTTAC
ATTACACTTCAGCAAAAAAACGCCGGTTCAATAAATCACTTGATTGTGCA
AAAAACAGTATTTTTATTCAGTGACTAACGAACTTGATGAACCTATTCAC
GGAAAATACCACACAGCTTATAAAAATGACGTTCATGAGTTAACTAAGTC
TAGTTAGGCTAGAGCAAACCTTTTTTTTACCTTCTCATACCTTAGTCTCA
TTCAAACTTCATATTTACTTATTTTCACAATATTTTTTCAGATGACTATG
TTGAACCAGAGATAGTTGGAGGTAAGTTTCTTTCCGTACAATACTTTCTG
CTTGATAGAAATTGTACGTCCCAATGACTACATGTAGGCCGGTGGGTGAC
CATGCACAAGTCTTTCCACCTGTCAGTAATTCTTTCTAACACAAGATGGC
TATAGTGCTATGGTCTTTCCTGCAGCAAGTGTGATTTGGATGTGATTTGC
TGAATAGATACAGTCAATCAGTCAATCAATTAATCAATTAATCAATCAAT
TAATAAACCAATCATCTGCAAGCATCGACTGCTTATGCATGGGTAGATAG
ATAGATAGATAGATAGATAGATAGAGATAGATAGATAGATAGATAGATAG
ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT
AGATAGATAGATAGATAGATAGATATAGATAGATAGATAGATGCTGAAGT
AACAATTTTACTCCATTATTATTCATTGAGACTTTCTAATGAGACTTTTC
TCATGCAAGTGTGATTTGGATGCTGAATAGATACATACTATATCATAGAT
GGTAATTGTACTCCTCTGCCATTCCCCTTTGCCAGATGAGTGCCCGACGT
CGTGTGCCCAGCAGCCGATCGACCACATCTGCGGTTCCGACGGCAGGGAG
TACGGGAACCTGTGCAGCCTGAGGGCCGCGGCCTGCAAGGAGGGGAAGAA
CATCGAGTACACCGGACCTGGGCCATGCAGAGGTAAACTTAGATTTAATG
TTTCCTTAAAACTGGCTCTGAGCCGTGCAGAGGTAAACGTAGATTAAAAG
TTTCCTTACAACTGGACCTGGGCCCTGCAGAGGTTAAATTAGATTTAATG
TTTCGTTAAAACTGGATCTGAGCTGTGCAGAGGTTAACCTACATTAAATT
TTCCTTAACCTTTAGCACTCTGAAGCAGCAGTTTTGCACCCACTTTCCTA
TTGGTTGCAGATTTACGCAGCAGGGAGAAGGTTAAGACTGGACCTGGATC
CTGCAGAGGAACGTAGTGTTTGGTCGTCTATGCTCTTTTGCCAAAGTTTA
GAAATTGGTACATGTTCAAGAAATCTGTTAACAATGTCTAAATCATTCCT
TTGTCTGTATGTATATGTGTATATTGGAGGTTAATGTGCCTTGCTTGCAT
ATTGTACTTACCAAAACAATATGTTTCAGGTACTTCCAGAACGTCCCCCG
GAGACCGAGCGTGTCCCTACATCAGGTGTTTCTTCCTGTATGACCCTGTG
TGTGGCTCGGACGGGAAGGAGTACTTCAACAGGTACGTCTTACCTACTAT
TACTGGGCAGGCGACAGATGGACTACAAACATCAGTACAACTTCAACTAC
AAGTTGCACAACAATGAAACAACATTTTTGAGGCGGCCTGAAAGTCTTTC
TATTGAAAACTGTCAATCGGATTTGTTCTCTTTCGTTATCACACATCTTT
CCTGACTAGTGTCCAAAATATCTACATTCATTTCAAATCTGCATTGATGT
TGCTTGAATGAGATATAGATTATTGACTCTTACCCCACCCCCTCCTTTAG
GTGTGTGATGAGGAAGTCGGCTTGTGTACAGCAGAGAGACATCATGGTGT
CAGAGGGGATGACTCCACCCTGTAACGGCGGTGAGCAAGATTTTTTTATC
AACCAAAATTGAGATACCTGGGTGCGCCTAGGACGTTAACTGTCTTCCTT
CCAAGACTATTCAAGACATTAGTGTGCATTTCTAGAATATAATTTTTTTC
TTCACTGATTTGCCCATATGAATGTTGTTTCCAATTATCTAAAAATGGCG
TTGAAAAGGCCTCTGAGGAAGCATGCCTGAACGTTGTTTTCATATTTTTT
TAATTGATTGTTAATTGGCAATTAAGATATTTGTTTATATTTACCACAAT
TTAGAACAAAAACTAGTAGAAGGATCACTGATTGCTTTAGGTAGGATACT
GACATGTTAATACATTTTTATACCTAGGTCCATATCGGCTGACTTTCTCC
AGCGAACTTTCCATCGACAACTACGCCGAGATTTCCGGAGACTTCGGCGG
AAGAGGAAAGGCCTTCACCGTGGCCTTCCACCTCCGCACGGACTCCCCAT
ACAGCGGCACCATCTTCTCTTATGCCACCGAGGAGGAGGACAACGAGATC
CAGTTCTACGGAGAAGCCGGCAACCGCGGCTTCAAGTTCCTCGTCAACAA
CGACCAGACGGACTTCATCGACCTTGAGGTCGGTTAAAATTCCGTCATAT
AAACTTGACATTAATTGACCTTTATTCGAGTGGTAACGGTAGCAAAACAG
CAATTTAAAAGTTCTTTGTTGATACCTAGCCATTGTTTCTGTCGCCTTCC
TCCTGGCAATATAGCCTGAGTGTCATCCTGTTAAGTTACAGGCTCTGCCT
TCACAATTCTGCTAGCATGCTACGGGCAATACTGACTGGTTCTATTTCAC
ACTTCAGCTACTGGTACTTATTGGCGATGCTAATGATATTTGTTAAATTA
TTTAATAGATGTCTTATTACTGTATATAATATTTTCTCCCATCTCCTACC
AGAGTCAGTTTCGACCGCATTATTAATGAATGTTTTAATCGCAAAAACTC
CTCTTTTTACTTCCTAGCTGATAGATGGGAGCTGGCACGTTGTCATGGTA
ACGTGGAGGAGCAGGAGAGGAGACTGGAAGATCTACGTGGACGGAGAAAT
CAGGGCGTCTGGAACCGGGATGAGTGTGGGGCACACCGTCAGGTGAGATC
CGTTGGAACATTAGCCTGGTTTTGTATCATAACTATAGTAATACGATTAT
ATGAACTCTCATAATTTCGCCGGGTACCAAAACCCTGCCACAAAAAAAAT
TAGGCCTGGTCAAGAATATCTTGAACACCTGTGTATCTCAAGTGTGCATA
CATGTACCTCTGGCATAACTTATTATGTATGTTTTCGTCTTTTAAGGTCT
GTTCAAATTCACCTTTGGTGAAAATGTGGTGGCCATAGGCTACACAGGGG
AATTATAGAAGTTGCCGTTTTCTGCATCTTTAGACCTGTTCCATGTTCTT
GCCGTTGTGCTTCAACTTTGCTTTGTCTGCTAAATATTCTCTGTTGACGC
CATTCATTATGAGAGTAAGGACCTAAAACTGAGTCGTACCAAGGTAGAAC
CAGAGACTTAGAGTTGGTATAAATCAGACATTCGGCCTATCCTTCGCCAT
CCCTCAAAATGTCCGATCCACTTCTTTACTTTAGAAATTTGACTGTAGTA
GCCGGTAAAGGGTGACAGTGCTACCCCCATCAAATAAAGATTATATTTCC
TTGCACGTCGTTTTTCAAATTGCAGCAAACACTTGAATAAACAAAACTCC
TGTCCAACCACTGACAGGAAAGGTTCTTTCTAGTCACAGTAAACATTAAA
CAAACCTCCTGTCCTACACCAGGGAGGGTGGCGTGTGGATCCTCGGCCAG
GAGCAGGATTCCGTCGGCTACGACTTCGAGGTGTTCCAGGCGTACGGCGG
CGACCTCGCCTCCTTCAACGTCTGGAACTACGTCTTGAGCAGCGAGGAGA
GGAACAGGGCGTCTTCCTGCTCTTTCCAAGGAAACGTCGTGGACTGGCAC
CGCTCGACCTTGAAGCTTCGCGGTGACGTCAAGAGGTCGTCCTACAGCTG
TGGTAAGTGCTGTTCGTTCTCAGTATGTTGTCTCTAAGCTTTGCTGCAGC
TTTGATTAAGCTTTCTTCTAAGTCATGACACTCCATAACAGATATAAATG
CTGTCGAGCGCTACAACAGTAACTTATGTTAAACTAGTAAAATTAGAAAA
TGATCTTTACACTTGCCTGTTGAGTAATATTCGGTGCATCTACGTTTGTG
TATGATTTTGACTTGCCTATTTTCGCGGGCTGCTTTAGCTTCATGGTTGA
AACACTTCTGTTTTAGGATTAATGTCCACTACTAGTAGAACATTGGAAGC
GCATATGTATACGGTATCATGAATCCTCAGTGGAAAGGGTGGTGCGAAAA
ACGCAATGATAAAACCACTGTGACTATTTCAAGATCATTTTCCCGTTGTC
CAACAGTGATGGTAAGCCTAGGTACTGCACTTCAATTGTTTTGTATGCTG
TAGAAGTAACATATACTGTACGAGATGACAATTCACTTTCTCCTGTTGTC
CCCAGGTGTTGGGCAGTGCAGGTATGGCGCCGTGTATGTGGAGGAGACGG
GCCAGTGCCAGTGTCCGCAGGGATGCCCCTACAACTACAACCCGGTGTGC
GGCTCGGACGGACGGCAGTATGCGAACGAGTGCGCCATGAGGGTGGCCGG
GTGCACGAACCAACAGGACGTCTACAGCACCGGCCGGCCGCCGTGCAACG
GCGGGACAGGTGAGGAAGGTTCCCCTTCATGTTCATGTGTTGAGTCAACA
TCTAATCTAATTGATGAAGTTCTCTATAGAATATTCGAGTGGTGTAATGG
CCAATGAGGGGGGGGGGGCAGATAGAAATAGGGGCATAAAAGACAACAAC
AACTAGACAAGTGTGGCAATGAAAAAGTATTGCCATGGCGAAGGTGTCTG
GTTGATCTTACTTCATGTAACAAAAGGACCAACGTAGCACTCTTGATACT
TCCATAATATTTGTTCGAAGCACTTTTTGAAACCTGACGTATGCTATTAG
GCTTGCTCCTGAAGCTTCGCCGAAAAGCGTAAATTTCAAACCGCACCACA
CATCAAAGGGGCTGCAGCAGGACTTCCACCCACGAATTGGCATGCGGAGT
CAGCCATCTCAGCTGCTGCTTGGAGACGAGACGTGTATCATCGCCATCTT
GGGCAGATGAAAGCCTATGATAATGTTCTTGATACATTGGAAGAGGCAAC
ATTTCGTTTGTAATATGTCATCGTACCCGATGGACAACTAAGAACAAAAA
GATTGAAATAAGCTTAATTTGATTTTAAAACCAATACATTGTACATTTAA
AAAGGGACCAAACATTTAGGAAGTCTGATAAAGTGTATTAACAATAAGTT
ATAATCAATACTTCTGTGATTTTTGCAGGCATTGCAGGAAGACCAGACGG
AAGGCCGAGCTCTTATTACCCAGGTTTGTTTGTCTTGCCGCTGACAATGT
CTTTACTGTTAACAACGTTACATAAACTAGAACTTCGACTCCTACTAAGG
CCAAACTGACTCCTTGCCACTGACTGACCGATTCTATGGATGACATTCAC
TTACGACTTTTGCCGGATTGACAAAAGGTTCTTGCCCCCCCCCCGCCTCC
CTCGAGATTATGGTAATACATTCGTTCTCACATAGGAAGGGAAAGCCGTG
GGTACGTCAGCCTCGGTTGCTGGAAGGACAGACCTAACACCGTCCTTGCA
GACCTCGAAGG Coding sequence (CDS) from alignment at Sc0000010:3458504..3464464- >transcript:BL97458_cuf12 ID=transcript:BL97458_cuf12|Name=transcript:BL97458_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=1488bp|location=Sequence derived from alignment at Sc0000010:3458504..3464464- (Branchiostoma lanceolatum)
TTAGGATCCTGCAGTTTTGGAGCGACCTATGACGCGGAGTCAGGCCAGTG
CTACTGCGACATCCAGTGCACGTACGAGAGTGAGCCGGTGTGCGGCACAG
ACGGCAGACAGTACCCTAACCGCTGCCTCCTGAAGCTGGTGGCCTGCCAG
AACCAGGAGGATATCGAGGTCAACGGACCGCCTCCCTGCGACGAGGATGA
TGACTATGTTGAACCAGAGATAGTTGGAGATGAGTGCCCGACGTCGTGTG
CCCAGCAGCCGATCGACCACATCTGCGGTTCCGACGGCAGGGAGTACGGG
AACCTGTGCAGCCTGAGGGCCGCGGCCTGCAAGGAGGGGAAGAACATCGA
GTACACCGGACCTGGGCCATGCAGAGGTACTTCCAGAACGTCCCCCGGAG
ACCGAGCGTGTCCCTACATCAGGTGTTTCTTCCTGTATGACCCTGTGTGT
GGCTCGGACGGGAAGGAGTACTTCAACAGGTGTGTGATGAGGAAGTCGGC
TTGTGTACAGCAGAGAGACATCATGGTGTCAGAGGGGATGACTCCACCCT
GTAACGGCGGTCCATATCGGCTGACTTTCTCCAGCGAACTTTCCATCGAC
AACTACGCCGAGATTTCCGGAGACTTCGGCGGAAGAGGAAAGGCCTTCAC
CGTGGCCTTCCACCTCCGCACGGACTCCCCATACAGCGGCACCATCTTCT
CTTATGCCACCGAGGAGGAGGACAACGAGATCCAGTTCTACGGAGAAGCC
GGCAACCGCGGCTTCAAGTTCCTCGTCAACAACGACCAGACGGACTTCAT
CGACCTTGAGCTGATAGATGGGAGCTGGCACGTTGTCATGGTAACGTGGA
GGAGCAGGAGAGGAGACTGGAAGATCTACGTGGACGGAGAAATCAGGGCG
TCTGGAACCGGGATGAGTGTGGGGCACACCGTCAGGGAGGGTGGCGTGTG
GATCCTCGGCCAGGAGCAGGATTCCGTCGGCTACGACTTCGAGGTGTTCC
AGGCGTACGGCGGCGACCTCGCCTCCTTCAACGTCTGGAACTACGTCTTG
AGCAGCGAGGAGAGGAACAGGGCGTCTTCCTGCTCTTTCCAAGGAAACGT
CGTGGACTGGCACCGCTCGACCTTGAAGCTTCGCGGTGACGTCAAGAGGT
CGTCCTACAGCTGTGGTGTTGGGCAGTGCAGGTATGGCGCCGTGTATGTG
GAGGAGACGGGCCAGTGCCAGTGTCCGCAGGGATGCCCCTACAACTACAA
CCCGGTGTGCGGCTCGGACGGACGGCAGTATGCGAACGAGTGCGCCATGA
GGGTGGCCGGGTGCACGAACCAACAGGACGTCTACAGCACCGGCCGGCCG
CCGTGCAACGGCGGGACAGGCATTGCAGGAAGACCAGACGGAAGGCCGAG
CTCTTATTACCCAGGAAGGGAAAGCCGTGGGTACGTCAGCCTCGGTTGCT
GGAAGGACAGACCTAACACCGTCCTTGCAGACCTCGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000010 | genome | Sc0000010:3458504..3464464 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97458_cuf12 |
| Biotype | protein_coding |
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