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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97468_cuf3 >transcript:BL97468_cuf3-protein ID=transcript:BL97468_cuf3-protein|Name=transcript:BL97468_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=209bp
LDPAEARYEVPEAALRVPRPGQAADNPMYDVTFTHRPFSFKVTRKSTGAT
IFDTSVGKLTFGDQFLSVSTRLASSNLYGLGEHVHRRYRHDLNWKTWPIF
SRGASPKGNFDNLYGHHPFYMCLEDSDGNANGVFLLNSNAMEVTLQPPVT
SIKSQIRDDILDVERVAMPTVTYRVIGGVLDFYMFLGPSPENVVQQYTDM
IGRSIMPAY Run BLAST on NCBI mRNA from alignment at Sc0000011:1585085..1587195+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97468_cuf3 ID=transcript:BL97468_cuf3|Name=transcript:BL97468_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2111bp|location=Sequence derived from alignment at Sc0000011:1585085..1587195+ (Branchiostoma lanceolatum)
CTTAGACCCCGCCGAGGCCCGGTACGAGGTGCCCGAGGCGGCCCTGAGGG
TCCCCAGACCCGGGCAGGCGGCGGACAACCCCATGTATGACGTCACCTTC
ACTCACCGGCCCTTCAGCTTCAAGGTCACCAGGAAGAGCACCGGGGCAAC
AATGTCAGTCATTACGTCATGTTTCTATATTGTTTTTGTAAATGAGCAAA
TTTATTAGAACTGCATGGAAGAAAATATCTATGGAGGTCCAGAGTAAGTC
GGAACATCTTGTCGCAGTGCAATGGAAACATGCATGAGAATAATAAACCA
ACTACTGTTCTAAAAAAAAAAAACAGCACTAAAACGTAAAGTTTTAAGGG
GCATGTGGTGTCTATTTGCTGGAGTACATTTAATATTTGATATTTAATAA
TCTTCTGGCTAAAAACGTAACAAGCACTGGATTCTTGACACGACTACCTC
TCACAGTACGATGTTTTAAATGTTGCTTTTTTTAATCAGAAAACAAGATA
CACATGGACATGGACATGGACATAGAGGCGCTACACTCGTGTACGTGGAC
TTATTTTGCAGCGCCACAGAAAAACCAAATAAGAATGGACAGAGACAATG
ACAAACTTAAGCAAGTTTCTGAACAAACGTAACATAAATAAGATAAGATA
TGACTGAAGTAAAGTTAAATGTTGTCATGAACTACGTTTCTTCAGATTCG
ACACGTCCGTGGGTAAGCTGACGTTTGGTGACCAGTTCCTGTCCGTGTCC
ACCCGGCTGGCCAGTTCTAACCTGTACGGACTGGGGGAGCACGTCCACAG
GCGCTACAGGCACGACCTCAACTGGAAAACGTGGCCCATCTTCAGCAGAG
GAGCTTCTCCTAAAGGGGTGGGTATTCAGTCTACGGTAGGCGTGATAAAG
ACAGGAAAGAAGCATTGGAAAAACAAGTTCAAGGCCATAAGTAATGGCAG
ACGTCACCCCGTTTCCCATACTGCTTGGTAGTCCTTATAGTCCCACATAC
AAAAGTACCAGCAATGTATAGCAATAGTGCATTGTGTACATTAAGAACCA
CTTTAACATACACGCACGTACTTACACAGCTAGCTAGCCAGACAGACAGA
CAGACAAGCTAAAAACAATACTTCACAATCATTGTACCTGGAACAATGGA
CTGCTATCTTCATCATCTTGTCGTGAGAGCGTTACTATGTTATAGGGTAT
AAAAACCAAACTTATCGTTCCAAAACGTTACCAGATGCTGCATGTATCAT
CATGAGCAACTGAACACCTCTGAATTATCTGAATCTCTTCTCCTTCCAGA
ACTTCGATAACCTGTACGGGCACCACCCGTTTTACATGTGTCTGGAGGAT
TCAGACGGCAACGCGAACGGCGTCTTCCTCCTCAACAGTAATGCTATGGG
TGAGGGAGGACTCGATAGTCATGTTATGAACTAATGTGTTTTCGGTGTAA
TCAACTCTCTCTTTCTTTCGGTCTTTATACCTTTGCACGTTCAATCACAT
TGTAATAAACCAACGTGTCTTGTACCTCCTCAGAGGTGACGTTGCAGCCC
CCTGTTACGTCAATCAAGTCCCAGATCCGTGACGACATCCTGGACGTGGA
GAGGGTTGCCATGCCAACCGTGACGTACCGCGTGATTGGCGGGGTGCTGG
ACTTCTACATGTTCCTCGGACCCTCCCCGGAAAACGTCGTGCAGCAGTAC
ACGGATGTAAGTGTATAGAAGCATTGAAAATAGCCACAACTAGATGCAAC
TATACGACGAAAGAACGAACAAGGTACTGACACGTTCAGGTTATGAACAA
GATTGATCAAGATCAAGACCACTCAACAGTGACAGCAGCATAGAGACAAA
ACAGGGCTGTTCACAAACAAACAAACAAACAAACAAACAAACAAACAAAC
AAACAAGCAACCCATACAGATGCTGGAAGTATCTAGCCTCCGTTGCAGGT
TCCATCGCCTGCTTTCTTAGGCTACCATTTTCCTGGTTTATCTTTTAGTA
CATTCTTATTGCGAATATTTATTGCTAGGTGCTTGAATATCGACATTCAC
TGTTGACATCTTTGCAAACCTCTCCTCAGATGATCGGGCGGTCCATCATG
CCGGCGTACTG Coding sequence (CDS) from alignment at Sc0000011:1585085..1587195+ >transcript:BL97468_cuf3 ID=transcript:BL97468_cuf3|Name=transcript:BL97468_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=627bp|location=Sequence derived from alignment at Sc0000011:1585085..1587195+ (Branchiostoma lanceolatum)
TTAGACCCCGCCGAGGCCCGGTACGAGGTGCCCGAGGCGGCCCTGAGGGT
CCCCAGACCCGGGCAGGCGGCGGACAACCCCATGTATGACGTCACCTTCA
CTCACCGGCCCTTCAGCTTCAAGGTCACCAGGAAGAGCACCGGGGCAACA
ATATTCGACACGTCCGTGGGTAAGCTGACGTTTGGTGACCAGTTCCTGTC
CGTGTCCACCCGGCTGGCCAGTTCTAACCTGTACGGACTGGGGGAGCACG
TCCACAGGCGCTACAGGCACGACCTCAACTGGAAAACGTGGCCCATCTTC
AGCAGAGGAGCTTCTCCTAAAGGGAACTTCGATAACCTGTACGGGCACCA
CCCGTTTTACATGTGTCTGGAGGATTCAGACGGCAACGCGAACGGCGTCT
TCCTCCTCAACAGTAATGCTATGGAGGTGACGTTGCAGCCCCCTGTTACG
TCAATCAAGTCCCAGATCCGTGACGACATCCTGGACGTGGAGAGGGTTGC
CATGCCAACCGTGACGTACCGCGTGATTGGCGGGGTGCTGGACTTCTACA
TGTTCCTCGGACCCTCCCCGGAAAACGTCGTGCAGCAGTACACGGATATG
ATCGGGCGGTCCATCATGCCGGCGTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000011 | genome | Sc0000011:1585085..1587195 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97468_cuf3 |
| Biotype | protein_coding |
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