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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97483_cuf3 >transcript:BL97483_cuf3-protein ID=transcript:BL97483_cuf3-protein|Name=transcript:BL97483_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=244bp
LTRTDRLDPVCPAMDERERVDCHPEGKAARARCEARGCCWSPAATQGPPS
CFYPTNHGYEVDGEVAKTASGYRARLRRLKSPTMYGGDVETVELLVEMQE
EHRLHVKILEPAEARYEVPEAALRVPRPGQAADSPMYDVTFTHRPFSFKV
TRRSTGATIFDTSVGKLTFGDQFLSVSTRLASSNLYGLGEHVHRRYRHDL
NWKTWPIFASGANPFGNYENLYGHHPFYMCLEDDGKANGVMLLN Run BLAST on NCBI mRNA from alignment at Sc0000011:1619959..1622492- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97483_cuf3 ID=transcript:BL97483_cuf3|Name=transcript:BL97483_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2534bp|location=Sequence derived from alignment at Sc0000011:1619959..1622492- (Branchiostoma lanceolatum)
TGCTGACCAGGACGGACCGCCTCGACCCCGTGTGTCCCGCCATGGACGAG
CGGGAGAGGGTCGACTGTCACCCCGAGGGGAAGGCCGCGAGGGCTCGGTG
CGAGGCGCGGGGCTGCTGCTGGAGCCCGGCGGCCACCCAGGGCCCGCCCA
GCTGCTTCTACCCGACGAACCACGGCTACGAGGTGGACGGGGAGGTGGCG
AAGACGGCGTCGGGCTACAGGGCCAGGCTGCGCCGACTGAAGAGCCCGAC
CATGTACGGTGGCGATGTGGAGACCGTAGAACTGCTGGTAGAAATGCAGG
AAGAGCACAGACTGCACGTAAAGGTTTGTACTTCCCTTTACTTTGTAAAT
TTTTGGTGCTGTATAACTTAAGTCATTGCAATTCTATATCTTGTAATGCA
CTGAAAAGAAATGTACCGTAGTATGTATGGAAGACCCCAGAACGATTGAT
ATACCAATCGATCAATCAATCGTTCGCAGGCATCAATGTCTGAACGATTG
ATATACCAACCTCCGAATTCTTATCCAGTTGTAGAGTTTGAATTCTCTTT
ATATACTGTTTACCTGAATGTCTAATCTTCACAAACGAATTGATATACCA
GCATACAATCAATTACTAATTAAACAGACATACGACCAAACGTAGGTCAT
TTTGCTACAATGACCTAATTACACTTTATGTAGGCGGTAGAGACATGCAA
GGTAAACACTCGTAACAAGTAAACTCTTACGATGTTAGAGTATCTAGTTA
ATATTTCACACAATGACCCACTTGGTGTTAGGTTATCGACGCGGGTTTTC
TTAGTTCAATATTTAGAAACGTTAACGTAAATGCACTCGAGGTGAACCCC
CTGTTTACTTAATACATAACATATACCAGTCAGGACTGTATGGACACATG
GTTCGAAAATATAATGCCACTTTGGCTAAATAGATATTTACAAATGTTAA
CATCGTTGTATACTCGTGGTAAACCCCTTGTTTACTTAATAAGTTACATA
TACCCACCTCAGGACATTAGCTGTGCAACCGAACCGTAACAACCCAACAC
GTTTTGTCTACAGATCTTAGAGCCAGCCGAGGCCCGGTATGAGGTTCTTA
AACCACAGGTTCTTATCTCTGTGCTTCTCCACAGATTTTAGACCCTGCCG
AGGCCCGGTACGAGGTTCTTAAACCACAGGTTCTTATCTCTGTGCTTCTC
CACAGATTTTAGACCCTGCCGAGGCCCGGTACGAGGTGCCCGAGGCGGCC
CTGCGGGTCCCCAGACCCGGGCAGGCGGCGGACAGCCCCATGTATGACGT
CACCTTCACTCATCGGCCCTTCAGCTTCAAGGTCACCAGGAGGAGCACCG
GGGCAACAATGTCAGTCATCACGTCATGGTTCTATCTATAGATAAAGAAA
GCACGACTAACTCACACAGTCCAAATGAAATCCTCGGTGTAACAGACCGC
AGGCCACAATATATTGGTTGTCTACTGGGCAAATAAGAGAAACGACCAAG
TTAACATCGCTTACAATCAAATATTCATTTCATGAGTAAAATAATTGTTG
AATGCGCCTTAAGCTTACTCATACATATCTACTCTGAAAGGATGATGATA
CCAATGTTATATAGTCTGCGTTACACAGTCTCTCACTGCCAGGGGCCACT
TGGACACCTCTTCTTGGGGGTCGCAATGGCAGCTTGGAGCGTGATTTAAC
CTGATAAACATTGAAATCTACCCGACAAGGTCCAGGTTTAACCATACAAC
ATGGCGGACAGCTCTTACGTCATAGTCACGTGAGCGCAGACGTCTTATAC
ATTGTCCTTACTGACGCCTATTTTACACGCCCAGATTCGACACGTCCGTG
GGTAAGCTGACGTTTGGAGACCAGTTCCTGTCTGTGTCCACCCGGCTGGC
CAGTTCTAACCTGTACGGACTGGGGGAGCACGTCCACAGGCGCTACAGGC
ACGACCTCAACTGGAAAACATGGCCCATCTTCGCCAGCGGCGCAAACCCA
TTTGGGGTAAGTGTTACCAAATTCTGTTATAAGGGGCAAATATGATATCT
TTGTCGTTAGATAAACCGGTAATTGTGGAAGAAGTCGCAAATGGCGTATA
GCTGTTGAACACTTAGCAACTTTTGTGTCTTGCCATTTTTAATGTATGCA
GTCAAACCTGTAACGTTACCTGTACCTGTACTAGTGAACCGCCACTATAT
ATATGTATTTATATATATAGGCACTCCTGGCCTCTATTACGTAGTTGCTT
GACTATCCTATGTATAGTGGCAAACTGTCTACACCTATCTACTATGACCT
AGTCCCTTGAAGGGTCCATAAAGACGGGTTGGATTGGTCAGCGAAGGGCG
CAGCATACTGTCGGGATTGAGGAATCCACTTGTGTGATACCCCTTCTCAC
GCGGCCAACTGTTTCAAATTCATGTTTTTTTGCTATTTGTTTGAACAGAA
CTACGAGAACCTGTACGGCCACCACCCGTTCTACATGTGTCTGGAGGATG
ACGGGAAGGCAAATGGCGTCATGCTCCTCAACAG Coding sequence (CDS) from alignment at Sc0000011:1619959..1622492- >transcript:BL97483_cuf3 ID=transcript:BL97483_cuf3|Name=transcript:BL97483_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=732bp|location=Sequence derived from alignment at Sc0000011:1619959..1622492- (Branchiostoma lanceolatum)
CTGACCAGGACGGACCGCCTCGACCCCGTGTGTCCCGCCATGGACGAGCG
GGAGAGGGTCGACTGTCACCCCGAGGGGAAGGCCGCGAGGGCTCGGTGCG
AGGCGCGGGGCTGCTGCTGGAGCCCGGCGGCCACCCAGGGCCCGCCCAGC
TGCTTCTACCCGACGAACCACGGCTACGAGGTGGACGGGGAGGTGGCGAA
GACGGCGTCGGGCTACAGGGCCAGGCTGCGCCGACTGAAGAGCCCGACCA
TGTACGGTGGCGATGTGGAGACCGTAGAACTGCTGGTAGAAATGCAGGAA
GAGCACAGACTGCACGTAAAGATCTTAGAGCCAGCCGAGGCCCGGTACGA
GGTGCCCGAGGCGGCCCTGCGGGTCCCCAGACCCGGGCAGGCGGCGGACA
GCCCCATGTATGACGTCACCTTCACTCATCGGCCCTTCAGCTTCAAGGTC
ACCAGGAGGAGCACCGGGGCAACAATATTCGACACGTCCGTGGGTAAGCT
GACGTTTGGAGACCAGTTCCTGTCTGTGTCCACCCGGCTGGCCAGTTCTA
ACCTGTACGGACTGGGGGAGCACGTCCACAGGCGCTACAGGCACGACCTC
AACTGGAAAACATGGCCCATCTTCGCCAGCGGCGCAAACCCATTTGGGAA
CTACGAGAACCTGTACGGCCACCACCCGTTCTACATGTGTCTGGAGGATG
ACGGGAAGGCAAATGGCGTCATGCTCCTCAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000011 | genome | Sc0000011:1619959..1622492 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97483_cuf3 |
| Biotype | protein_coding |
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