XLOC_001704 (gene) - C. hemisphaerica

Overview
NameXLOC_001704
Unique NameXLOC_001704
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:28015..33475+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001704 ID=XLOC_001704|Name=XLOC_001704|organism=Clytia hemisphaerica|type=gene|length=5461bp|location=Sequence derived from alignment at sc0000025:28015..33475+ (Clytia hemisphaerica)
NGCTGTATACAGTCCATTCAGGGACGATCCATGGGCTGCCAAAAAGCAGA ACGACAAATCATCAAAAACGTCGTGTCATCTCTAGCTTCACAACTTCAAG ATCTATCTTTTAACTTCAAAAAGGACCAATCTAAATATCTAAAACGTGAG TTTTATTATTAATTGACATAATTTTCTGATACTCATATGACTTAGAAATT TCCTTGGTCTATATTTTAGATGATCTCTGTCAAAAAGGATTTCAAAGTAG ACCTTGTCATGTCTGCAAATGGCTGGTTCTATAATGAATTCAAAATTGCT ATGCTAATTTTAACTGTTTATCAACAATTCTCATTAGGATTTAGCCTTTA GTCATTGTCACTTTAGTTTTATCGCTTTATTAGTGTGGATCGGTCTAAAG TCAGATTCTCTACTCTTTTTactttaaggtatgaagaaCAGAGAGGAAAG GGAAAAGGAATATTTTAGCAACGATTTCAACCCTACCAATGTGTTCATGC AAGAAGATGAAAACTTCGAAGAACTATACGATAAGGTTTGTATTTGTTCT GCAGTCTTCCTTCCACTTTTTGTTAGGAAACAAAACAGAACTCACTTGGG AAATTCATAATGGGGAACGCTTTTCTGAATGATATCgttaaaaagaacaa ttttgaGAATAAGAATTGACTGTTTGCATCTTTCCTTTTCGGACCTTCTA CCTCGAGGTCCTATAAAATTAACTCCTCTTTGTTTGTTCGTTTGATTTGT CATTTTGTATATCAGTATTTTTACACCTTAATGAGTGCCCCATATGTCAC AATAATTAGTCACTTAAGGGTTATGGAGTTTTCTGTTCAATTCTATGTCA AATGTTCAATGTTTTGTAGATGAACCAGATAGGTCTAAAGTATCATTTAT TACTTCTTAGGGTTTCACGACCGCACAACTAACAATGGTGGAAGAAAACG ATAAATTTGTCAAACAACGAGAAGAAGAAATTTCACACATTGTTCAATCT ATAGGCGACTTGAATACCATATTCAAAGATCTATCAATCCTGATTGTGGA TCAGGTAAGGTTCATTCTTTCCCTTGTCAATTAACACGATACCATGGAAC AATTACATGCATCTGTGAAACTGATCTAtacaaaaaaaatgatattCCAG ATTCCTTCATTATCATCGATTCGCTTGGccttactttttattttcaaaaa taatttacttaATGCTAACGTACTAGTCATCAGTTTTGATTACGTGCCAT TTAACTGAGAAAATGAAAGTaggtacagtatgtggcccccaaaacggcga tcaaatttaaaatttctctcaaagctagaggaaaagaggttttacaaaaa ttttcttgcatgcaaaactttaacatctctactttatttcccgacagttc tttttcgaaattttcaatttcaacatttgataggtagcttttttctaatg gcccacaaaacggaggtttgcaattttagcgatttctcgagatatcttta agatatgaatacaaaattttgaccataattttgaaatatgatttagaggg ttttgggcataaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNtacagtatacccctggttgtcaaaatgcaggtttggggcccccaa aacggaggtgtagttaaaatcaaattattaagcccagtggtaataggagg AAAACCtttgaacatatttgtgtttacccttaaatttacgacccgataga tgtaaaatttatgatttttatgaaatatttcaagattttcgatattgcaa agtccaaactgaagaaaatcaatgtcttttgaaaatagttccattcatgt atggaaaaagctgtgaaaatttgagaagaaaagcttaactgaaactgaaa atataagctttaaaggtaattttctcctatattttacagaaaaatgacag aatttgccatttttgctaATTCAGCGGAAATTTTTAtatatgttattttt ttgttataagctatTAACTCAACCTGATAGGAATgtaattccaagatttt ttgctgtttctcatatttagaattttcggttttatcaatgctgattctag ggtcccaaaatactggttgacctttaagatgcTATATCTTTTACCCATCC TCTAAGGTCACAGATCTGcagtatctgcattttctgaacggcattaggtt tagaaagtttcctataccccattttcataacttattttcaatatccaagg agctagagtgagttatatgcaatttttatctaattttggtgttaaaatat ctcCTTCatacgcaaatatgttattttgaatctgtctcaaaccataaaaa acatgctcattttttaatataaccatcattctttcaaaataaacaaaaat cgtttaattctgataaatctacaagtcagaatcctcattttaatgacaac ttcCGTTTTTGGGGCTGTCTCCGTTTTGGGAGCCATATACTGTAGCATAA GTTTTTATGACTGTGAATTCTTTGATATAAGGTATATCATTTTGTAATTT ATGTATATTAGGAAATTATGAGATACCGTAACACAACAAATATTATCGAG GCCCAGAATTTAAATCATTCTTTTCACCTTCGTTTCTCTTTATGTTTAGG GCACGATATTGGATAGAATAGATTATAATGTGGAGCAAGCGTCAGTACAA GTCGAAAAAGGATATCAACAGCTGCAAAAGGTGTGTCAAATACCTTCCAT TACGCCTGTCTGCCtctttcaaagaaatatttatcATTAAGAGAATGTTA AATACGTTTTCACAGGAAGCGAAATCTCTTTTATACATCTGCAATGAATT CACAACCGTTGTCATGTATTCTCCAAAGGGGTCTCCATTGTGGTATTCTT AGTACACGTTTGATAATATATAGGGTTCCAAAGTAATATTAAAATACGGG TAGGGGGTAGAGTAACTTTTTTTGggggtatcttcagatcttcttcgcct ggtgttttttctgttcaatataatgatagaagacatttaaaaaaaaaaat tttaattttatgcatttttgacgaattccagcccaaaaaactgcccgggg gggcttttttaccaaaaaatcagcttttttgaggtttatcttcatatctc ttccaaaacttgctcaaatttaagatgtagtgtttttttatgaaaattta acctattgtgatgcattctgcgcaattttaaggtcagaagtccaaaattg gccgaacccccctgggggtactgattcgcactacaggcaaaaattggaaa aaatggcattttctggccttttcaggcctgtaaatatgtcaaaactattg caaatcttattttttttcacttgctgtactaaattttatgaagaaaccag aaaataatcatattggattgaaaattgtgcccgttggagccctaaaagag ctgttttaagccgattttgggtagcaaaatgctttttaaggccaattttg caagttcataaactttaaactaattgattcACACGTCTGAAATTTTCAGA GATGGAAGTCTTCAGTAAAGTATTTAAGCgaaaagaatttcaaaattttt actttttttaaaatatcataatggcgtcttcaaaaatcgctttttagcaa aaaaaaatcagatttatcaaaatatagcattttttaagggaagcttctac aaactgagtttaaatgctgattgaaattttttttgcagtgatagtactct ggagatactccagggaaatcaaaaacatttgggtctgggatacgtctatg tcccccattatggaatgaaatccctgctaagagccatttttcaggaaaaa ctccaaatttggactgaaaaaatctctaaaatgacaatagacatgggccc gaattttcttgcagtgatagtattctggaaatactgcaggaaaatcaaag tcatctgggcttgggatttgggtatatccaccattttggaattgaaattc ttgctaaaatgcaatatttcaatcaaaaatcttttttttttgatttttcc agtcaaaaattggatttttgattgaaatattgcattttagcaagaatttt gggctggaattcgtcaaaaatgcataaaattaaaatgtttttttttaaat gtcttctatcattatatggaacagaaaaaacaccaggcgaagaagatctg aagataccgaCTTTTACCCCCTACCCCTAATTAAAATTGAGTTTGCGTTG AGCTGATTTTAGAAAagttaaatttgaaattaaattagAATCTATTTTGA ACCATTCATATACNATTGAGTTTGCGTTGAGCTGATTTTAGAAAagttaa atttgaaattaaattagAATCTATTTTGAACCATTCATATACGTATATAC CCGCTACGTGAAGcttaaaatcagttttttggtATACTCCAATCAGGCGA CATTTTCTGCATTTCTTAGCTTTtaattcttattttcttttcGTCTTGTT TTTCAGGCTGAGAAACATCAAAAGAAGAATCGTAAAATGATGTGTATTTT AGTTTTGAGTGTCATTCTAACCATCATGATCATCATTCTTGTGCTCACCA AAAGCTGATAGTGGTTTTATTGTTTTCTAGGAAATATTCATCTATTTATT TGCCCCTTTTTACCACGAATTAGCCCAATTTATGCTTTTGATATGCATTT TAGCTTGGACGAACTAGAATCTCACACGTGACACCTCTGACACCGTTTGA AATTTCAGTGTAGTTGGTCAAAACTACAGAACGAAGAATAATTTGGAAGG GTTGAAAGTGGTTTAATAAAGTTTGACATCAGTCATTAGCTTGGCTTTTC TCATAcatgtttataagaacatttggaCAATTGTCATAGAGATAAGCGCA TCCAGGCTCAGACCAAATTAAGACGTTGTGATAAAGAACTTTTAACAGTT TTTAACGGATTGCGAGAGTATTAACGTAGAAAATATAATAACAATTCCAT TCCAGTCTTGCCAAGCCTAAAACAATTTCCTTTTTCGGGGTTAGTTCTTA TTTTAAAAGATAATTTTGGATGCCATTTTGTATATTTAGTTAGATGTTAT TGTTAAATTGCATCATCTTTCGTttcattttagaaaatttttgaatttaa ttttgctatTTGCAATATCTATTGATaattgattatcttttctcGGACAC TTATTTTAATGCTGAATAAAGCCTAATCTTACTTTCGGTCAACTGAGAAT ACATCAATGAACATTTTTATATGGGCACAGCTGCTATCATTTTtcgttta aaatatatttttgagtaacACTGCGAACAATGAATTATCCATCATCCttg aatttctattttatttattattatattCAGCTATTGtaaatattataatt ttttcggTCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003073TCONS_00003073Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:28015..33475 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.01 25.54 7.88 5.66 13.75 10.89 18.74 17.04 11.24 11.62 8.83 7.94 4.97 4.39 4.59 5.33 7.67 7.35 3.47 6.33 6.78 8 18.83 17.97 6.43 6.64 11.11 8.59 17.79 19.6