XLOC_002852 (gene) - C. hemisphaerica

Overview
NameXLOC_002852
Unique NameXLOC_002852
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000050:93899..99697-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002852 ID=XLOC_002852|Name=XLOC_002852|organism=Clytia hemisphaerica|type=gene|length=5799bp|location=Sequence derived from alignment at sc0000050:93899..99697- (Clytia hemisphaerica)
GCAAAAAATAAATCTACATCAATCATTTTAATCGAGATGAGCAGTCGAAA ACGATCACATTTTATCCAAGCAAAAGATGAATTTGACGAATCACACACGA TCAACATTCCCTGTCGAGTCAATAATATTCGTTTTCAAGGCTTCGATGAA ACTGGGAAATTTTACTGCATTTTAGAACGTACTGTTCTGGATCGTGTCTG CTTTCACGTAGTATACTATACAGAGCAAAGAAAGTTGACACGACAAATGA TCGAGATCCGAATTCCTCAAAGTCAATTTAGTTTAAAGAAAAAAGTTTTT TTCAATCCTGCAGAAACTAAACTGATATATTTGACGGAGGAAAAAGTTAC GACAGCTGAAAATCACCAAGAGCTCATTGTGAATTTATATTCTTTTGAAC TGTTTTCGAAATTCGGTATTGGGAATTGTGAATTATCGCTTGGTGAGCCT GCTTCAACCCTGACATATTCTAACTACAATACAATCGATTATGTACACAA AAGGACGATTTCAACATTAATCATTTACGCGTATCGAAAAATTGAGGACG GCGAAAGGTCTTTGTTGAACTCGTTATACTCGCCTCGTTGTAGTCTTGAT ATTGCTAAAAGCAACAATGACGGTTGTTTACACGTCAAACGAATCGAATT TAACTTATCTGTTTTCTCAGAGGTTATTACTCGGAGAATGCCCAGGTTAA GTCTCTCTTCGAATGGCTCTTTTTATTTTTACCGTAAAACTGATGAAACG GAGATTGGCGAAACTTTGGAGATGAAAGAGTTTGATTCTCAAAGTAAGCT GAAGTATTCTTACTCCATCTATCTTCTTGGCGAGTTGAATATACTTTACG ATTTTGTGGAGATTGAACGATCAATGCACATTGTGTTGAAGCGAAATAAT GGTGTTGTAACCATGTGCAAACTGATCGATGGTCAAGTCATCAGTATAAA GGAATTCAATACCAATCAATACATCGAAAAGCTTGGCTTTGAACAGATCC TTCATCCTATGAATAGGTTTGATCATCTTTTGTTGCCAATTTATCAGAAG ATAGGCAGCAACTCACAGCGTTTTAACATCCTTGATGTCACGGATGAAAG AAAAAGTGTCGATATTTTTTATGAGAATCCATGGTATCAGCATTACGCTC TAAATTGGAACGAAAGAGAATTTGCAACAATCGACTGTAAAAAGAATATG GAGAGAAGAAATCTGCTGACCTTCAAGATTGACATTTTGAAGTATGAACG GGACCCTCCAACATTGAGACAAATATCTCGCCTAGCCGCATTAACATCAT TCAGTCATTGTGACTTGTCAAGATTCAACCTACCGTCTACGTTGGTTCGA TACCTGGGTATCGATCAATGAGTTAGGATCGTGTGGAAATCAATTTTATC CAAAAATTCTCTTCCATTGATGTCCTTTGACAAGAGAAAGCCTTATTACA TTTTCATGTTGATTTTGATGATATTTTGTTACATTTATTATTACTTGATT GCTACTTTTTTATAGTGTTCTTTTGCGTTATTTAGTTTCTTCTTGGTTTA GCCATCTTCTGAAAATCCCAATCTTATCGTTATCGCCCCTCTTTTTATCC CAAACCATTTTCAAAAGATATCTCTTTCTTCTTTGTTTCACTATACATTG GTGTTGATGAAGTAGTTTTGGTGACCCTACAGATTGGGCATACTTGAGAT GAGGTTGGAAAAAGGTTGTGTACAGAGTGAAGATAGTTTTAAGGCTTAGG TCTTCGAAACCTCTTCTGATGACTCCGAGAATGGAATTTGCTTCTCTAAT GACCACCTTAATGACGGTGTTAGAGTCGTCTAGTGAAGGGTCTTTAACTA CTTCAGCATAAGACCGCTTTACCACAGTCATTTGGTTTTCAACACTCAAA CATGATGTCGTCAAAAATCGACGCCTTCATGGTTGCAATAAACTCAATGA TCTCTTTTTTAATCTTTTGATTCATCTCGTCTACGGAACTTCTCTCGATT GACTATTACATTTTTTATATAGTTTCTCGTGTAGCTTTTTATCAAAAGAC ATGTTTAGTGAAATAAATAGAATCAAGTGCTCAAGATCGCAAAGTATCGA GAAATAAAGAACTAATTATAGTCTGTATAAAAAAACCTTGGTCTGGAAGC CTTTTGTTTCTTTCCATTGTTTCTTACTTGAACTTGTGTTGAGAAATTAG TTTGTTTTGCTCACTTTTTGATCATGTGATNGGTTTGTTTTGCTCGTTTT GTGATCATGTGATCAAATCTTAAACCAATCCGAAGAGGAGTACTTGGTAA CGTGATCAAAAACTGAGCAAATCGATTTTTATCTTTTGATATTAACAAAG GAAAAGCTAACAAAAAGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTT ATAAGGACTATGAACTAATTTACAATTACTACACGGCGTTTCTAGCTGGT GCAATCTCCAGGCAATGCATGGTGTATTGTAGATCTTATTTCAATGCACA TTCTAGAAAAACTTGGGCTTTTAATTTTTTTTAAACAAGTATTGTTTTAC ATTTGTTTCAAAAAAATATAAATTTTGATATTTGTCTAGTTTTGTTATCT TTACCGTCAGTTACCGTCAATCTTCTCAAATTGGTTCTGTGTTGTACAGA GGTCAGGAAGATTGAACATTTTTTGCCCAGGGAGGATTCTTGTTTATTGT GGCATTCTCTACTGGACAGTAGTTAAATTTAGTTTTACTTGTAAATAGAG CTTTACAATTATACTTAATGTGTCTAGGGTATTAAACAATTTTGTCATAA AAACATTCTTATCAACTCTAATGACCGCATAATTATAAAGGCAATGAATT GAGTTTGAAATCATCTTTATAAGAAAAACATCTCAAACTAAATTTCGATT GACTTTTAATTCTTTTAGTTCTCGAATTGGATTTATTATTTGACCACTTC TAAATTTTTTTGAACAGAATATTTCAGGCTTGCATATATGCTCACGTTAT GCTCAGGAAATCTGCAAACCTGAGTTTCATATGCTTAGAAGCGTTATGCT TATCAAAAAGACATGTGAAGGATTCCAAAATGTAAAAAAATATTTAGTTA ATATATCTTCTTTCACTAGGCAAAAAATAAATCTACATCAATCATTTTAA TCGAGATGAGCAGTCGAAAACGATCACATTTTATCCAAGCAAAAGATGAA TTTGACGAATCACACACGATCAACATTCCCTGTCGAGTCAATAATATTCG TTTTCAAGGCTTCGATGAAACTGGGAAATTTTACTGCATTTTAGAACGTA CTGTTCTGGATCATGTCTGCTTTCACGTAGTATACTATACAGAGCAAAGA AAGTTGACACGACAAATTATCGAGATCCGAATTCCTCAAAGTCAATTTGG TTTAAAGAAAAAAGTTTTTTTCAATCCTGCAGAAACTAAACTGATATATT TGACGGAGGAAAAAGTTACGACAGCTGAAAATCACCAAGAGCTCATTGTG AATTTATATTCTTTTGAACTGTTTTCGAAATTCGGTATTGGGAATTGTGA ATTATCGCTTGGTGAGCCTGCTTCAACCCTGACATATTCTAACTACAATA CAATCGATTATGTACACAAAAGGACGATTTCAACATTAATCATTTACGCG TATCGAAAAATTGAGGACGGCGAAAGGTCTTTGTTGAACTCGTTATACTC GCCTCGTTGTAGTCTTGATATTGCTAAAAGCAACAATGACGGTTGTTTAC ACGTCAAACGAATCGAATTTAACTTATCTGTTTTCTCAGAGGTTATTACT CGGAGAATGCCCAGGTTAAGTCTCTCTTCGAGTGGCACTTATTATTTTTA CCGTGAAACTGATGAAACGGAGATTGGCGAAACTTTGGAGATTAAAGAGT TTGATTCTCAAAGTAAGCTTAGGTATTCTTACTCCATCTATCTTCTTGGC GAGTTGAATATACTTTACGATTTTGTGGAGATTGAACGATCAATGCTCAT TGTGTTGAAGCGAAATAATGGTGTTGTAACCATGTGCAAACTGATCGATG GTCAAGTCATCAGTATAAAGGAATTCAATACCAATCAATACATCGAAAAG CTTGGCTTTGAACAGATCCTTCATCCTATGAATAGGTNAAATTCTCGCCA AAATTTCTTCCTTTAATGTACAGTAAAATAAATAGAATCAAGTGCTCAAG ATCGCAAAATATCGAGAAATAAAGATCTGATTACTACACGGCTTTTCTAC CTGGTGCAATCTTCAGGCAATGCAGGTATTTTATTTCAATGCACATTCTA GAAAACTTGGGTTTTTATTTTTTTAAACAAGTATTGTTTTACATTTGTTT CAAAAAAATATAAATTTTGATATTTGTCTAGTTTTGTTATCTTTACCGTC AGTTACCGTCGGTTTTCTCAAATTGGTTCTGTGTTGTACAGAGGTCAGGA AGATTGAACATTTTTTGCCCAGGGAGGATTCTTGTTTATTTTGGCATTCT CTACTCGACAGTAGTTTGATTTAGTTTTACTTNTCATGGAGGATTCTTGT TTATTATGACATTTCTCTAATCAATAGTAGTTACATTCACTTTTACTTGT AAATAGAGCTTTAAAATTGCTTAATGTGTCTAGGGTATTAAACAATTTTG TCATAAAAACATTTTCTTATCAACTCTAATGACCGCATGATTATAAAGGC AATTAATTGAGTTTGAAGTCATCTTTATAAGAAAAACATCTTAAACTAAA TTTCGATTGACTTTTAGTACTTTTAGTTCTCGAATTGGATTTATGATTTG GTATTTTTTTCGGCTACGCCTTTTACTAAAATAATAATTCAAAACCAGTC TAAAGTTTCTTNGCATTAACATCATTCAGTCATTGTGACTTGTCAAGATT CAACCTACCGTCTACGTTGGTTCGATACCTGGGTATCAATCAATGAGTTA GGATCGTGTGGAAATCAATTTTATCCAAAAATTCTCTTCCATTGATGTCC TTTGACAAGAAAAAGCCTTTTTTCATCTTCATGTTGATATTTTTTGTTAC TTTTATTATTACTTGATTGCTACTTTTTTATAGTATTCTTTTGCGTTATT TAGTTTTTTCTCAGTTTGGCCTTCTGAAAATCCCAATCTTTTCGTTATCG CCCCTCTTTTTATCACACACCATTTTCAAAAGATATCTCTTTCTCCTTTG TTTCCCTATACATTGGTGTTGATGTCCTTACGTAGTTTTGGTGACCATAC AGATTGGGCATACTCGAGATGAGAATGGACAAAGGTTGTGTACAGAGTGA AGATAGTTTTAAGGCTTAGGTCTGCGAAACCTCTTCTGATGACTCCGAGA ATGGAATTTGCTTCTCTAATGACCTCCTTAATGCAGGTGTTAGAGTCGTC TAGTGAAGGGTCTTTAACTACTTCAGCATAAGACCGCTTTACCACAGTCA TTTGGTTTTCAACGCTCAAGAGTGTCGCTTTGATCTTGTCAATAATTGAC GCCTTCATGGTTGCACCAAGCTCAGTGATTTCTTTTTGAATTGCTTGATT CATCTCATCTACGGAACATCTCTCGATTGACTGATCTTTTTCTTATTTTG TTTCGCATTGCGTGACTTCGCCAATTGGACTGACTTGATTAATTTCTTCT CATTTATTTTCTCATGTAGTTTTTTATAAAAAGACGTACCTTAAAGGGAG AAATTTTGGCGGGAAGAACATTTGGCGGATTTGGTCAAAATCCGCCGAAT TAAGTTCCCGCCAAATTTAAGTTGCTCTATTTATTCCCCCAAATGTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005038TCONS_00005038Clytia hemisphaericatranscript
TCONS_00005037TCONS_00005037Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:93899..99697 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.84 0.87 0.62 0.46 5.25 3.96 3.52 3.7 1.69 1.59 2.04 0.95 0.95 1.46 1.17 1.39 1.86 1.59 0.57 0.62 1.42 1.52 0.87 1.02 2.4 2.89 1 0.46 0.49 0.5