XLOC_002970 (gene) - C. hemisphaerica

Overview
NameXLOC_002970
Unique NameXLOC_002970
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000051:572632..576060-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002970 ID=XLOC_002970|Name=XLOC_002970|organism=Clytia hemisphaerica|type=gene|length=3429bp|location=Sequence derived from alignment at sc0000051:572632..576060- (Clytia hemisphaerica)
AAAGTTTTGTAGCATTTTAATCTGAAAGATTCAAGCTCGGATTTAAGATG
AATGTATCATTAACAAAACTCAAGATAAATCATAAAGACAAAACCGAGCT
GCAAGATAAAATCACCACAAACGTTGAGTATCAGGAGGACGATAAGGAAC
ATTTTAAGAAGACTGTTTATGAATATCTTTCCACAAGGTTTAAAGACGTG
AAAGAGGAAGTCAGTGAAGAAGAAGAAACGGAAGAAGCCGGAAATGAAGA
AATCGAATTTCGTGAAGAGGAAAATATTAACGATGATGACATTAGATTTG
AAGAAGGAGACACACGGCAGCCTAAAAAATCAAACTTGCAAGTCGCATCT
GGCAGAGTATTAGAGTTTGATACACTGGAGAATGTTCGAAGTATGGGAAC
AGGGGATGAAAATGTTTATTACTGTTTCAACGTGAAAGTTATGTCAACAA
CTCCTTCCGTCGGTGACACTAAAGATAAGACTTTTGGAGAAATGGCTTTC
GTCTTTTGGCGATCTGCTGACGATGACGTCATCATTTATGTTTTCTTGCA
GAATCGAAAGTCGTACACGTGGACAGTGTTGACAGGACATAGAGATTGTG
AATTCCCAATGAAGTTTGCCAGAACTTTTCTTGACCCAAACTCTATTGAC
AACATTTCTATGAACAGTTTAGTTGGAGCAGAAACAGGCAAGCAGAGATT
TTCATTCAACAAAAACAATCCTTTCCAACCCTCTTTTGTCATGGACAGAT
TCGCCGTTGTCGAAGGATTTAAGGCCAGCCTTGGTAGTACTAAAAACTGC
CAGGAACTTGCCAACAAACTACAAAAAGCAACCAAAGATTTGAAAACAAC
GAAAGCTATCATTCAAACCGGTCAAGTTAAGTTTGCATTAGATCTAGAGG
GTAGGAGTTTGGATCCAGAAAGATATATAGACTTTCTAGCATTCATCCAT
GGAACCATGGAACAAGAAGCCGGAAGAATTGCCAACGATCTTCAATGGAG
GTTCCTGGATTTCATTGAAAAAGCTCCGCTGAATGATTGCAAGAAGGCGA
ACAAACTTTTTCATAAGCAACTTCAAAGCTTCTTCCAAAAGAGCGCTCAA
CCAGAAAATATCGATTTAACAGGAATCCTTTCCACGCCTCGTCAAAATAC
ATACGAGTCAGTAAATATTTATTTGTATTATGATAATAAAAAAATCGAAT
GGGCGGAGGGCGGAGATTTACGGGGCGATGAAGTCACTTTGGAGAAAATT
CGTGAAGCTCTCTCACAAGCTGATGTCGAGTCGACCGACCCCGATAAGGT
TGTTTTGAAGTTTAACGCTGGAAGTCGGATGGAAGAAAAACTGATCAACA
TGATCAACGGAGTCAGCATTTTCGAGGGACCGGTTGACGGTGAAAATAAA
CAACGTAAATTGATTCGATGTGGAGGTCTTTCTTTTCTCATCCATATCGA
TAAATATTATCAAGAGCTGTACCTTTTCATCAATGCCGTCCGAAAGACGC
TCGTTCAAAAAGAATCGCTACCGGAAATTCTGCCATGGAGTTTACCGCAG
CACAAGAATAGCTTCACCATGAAGCAATTGTACGAGTTTTGCACCACGAT
CAAAGGAAGCGACGAAGACCTTAAAGAACTTCAAGATATTTTATGTGAAG
ATGTTCAACTTTTTGTGAATGGTCAGAACAATCTACTAAGAACACTTGAA
GACAAGAATCATGCCGTCTGGTTGATTAGTTTAAATCAGTCGCCCATCAT
CGGATCAAAAATATGCGAAGAAATCGCNCAAGAATCATGCCGTCTGGTTG
ATTAGTTTAAATCAGTCGCCCATCATCGGATCAAAAATATTCGAAGAAAT
CGCCAAAGCTATTAAGAAAACTGAAAAGAAAGCCAAATCGGAGATTGAAA
AGATTTTCAGTAAACCAACAGTCGATGCAAAGGATGAAGATCTTGTCAAA
GTTTTGAACGAAAAAGAGAAGAACATCGAATTAGTCAAAGGAGAGACCGA
TCGATTTCGCGTGAAACTTCAACATCTTACCAAAGATAGCTGGGAAGCAA
TCAGTAGAAGTTACCCACAAATTTGTCCAGTGCGTTTGATCCAATTCTTA
AGAACATTTGCTGATGTGAAAGGTGAGGGCGATTACAATGAACTATATCA
TCTGTCAAATTGTCATTGTCAGAAGAGTGATTGGAAATATGTTGTCGGTG
ATCGCATTTTGGCGGATGCAAATCACAACATTGAGTTGTTTGACGTGATG
GCGATCAAAGAGAACGAGGCGTTCCTTCTGCATGTCAAGAAGAATTTTGA
TGCATCAGCTGTCCGCGCTTTAGCCAGTCAAGTTAGAGTCAGTCTTGAAT
GTTTTTGGAATGCTTCTTTCGATAACTCCACCAGCCAGAATATGTTAGAG
AAATTCTACGACGTCGCGCGGCCGGATAAAGAAGACGAGGAGTTATCTAT
CCACAGACGTCTGACCAAATGGGAGATGGGAGAGATTGGATCAACGAAGA
AGGAGTTCCTTAAGAAAACCATTCACCAGAAGATGAACATTAAAATCTGT
CTTGTTCCATGCATGGAGAAAATTGGGAACCATTTCCACGAGATTGCGAA
ATGTGACTTGAACCGAACCTTCGAACGACAAGATTTCGCACAGAAAGGCA
ACCACGTGAACAGGCAACGAATGGAGAATCCTTTTCACGCTTTGAAGAAA
CTCAACATTCTTCATCCGAACGGTAAAATCTCCCCATCGTTTTTTAACTT
CGACAAGAATCAATTCACAAAAGCACTCTTTAACGAAATCCCCAACAAAA
CACAATGTAAAGACACCTTTGATGAAATCGGAAAGCTTTTGATCAAATCG
CCTAAGAATCCGCTTTTCGACCCCGCATCGTTCGTTTCCAAAGCTGAATT
CGTCAGTCTCTACAACTATCACTTCAAATGTCATGTTTCTCCAGGTTTCA
AACCGCTCAAACTCGGTGTCATCCCGATCAACGAAGTTTGTCAGATCCTC
AACCCCAATCACACCGACAAGGAGAATGTGACACCCGCAACCACCGCTAA
ACCTAAGAAACGCAAAAGCGACGAGAATCAAAACCAAGCCACACCACGGA
AAAAATCACCCCCCCCCCCCCCCCAAACCCCAAAAAAAAAAAAAGGGCCG
AAAATCAAAACTAAGCTACCCCTGGGAAAAAATCCCCCCCCCCCCCCTTG
TCAATTCAACTCCACAGAGAACACCAAAATCCTCAAACGGGAAAAAGCTG
AAGCAAACGACGATTAATTTTACATCTAAAACGCCAAAAAACAATACTCC
GAATTAACTCTGAATACAGATTTTTTAACTTGAATGATAGAGCGTCAAAA
ATATCATTAGAAAGATCTCAATAAACATTTTTATATTTTAAATTCTTTTT
AATTTTAATTTTAATTTCTAATTTTTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005226TCONS_00005226Clytia hemisphaericatranscript
TCONS_00005225TCONS_00005225Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005225-proteinTCONS_00005225-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:572632..576060 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46	0.48	2.78	1.65	53.92	58.59	23.56	28.07	9.83	17.84	12.07	6.04	8.86	8.36	11.22	8.81	8.75	10.34	3.27	4.58	2.81	2.36	6.33	3.51	25.04	22.35	4.64	2.87	13.43	12.16