XLOC_003031 (gene) - C. hemisphaerica

Overview
NameXLOC_003031
Unique NameXLOC_003031
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000052:206565..213046-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003031 ID=XLOC_003031|Name=XLOC_003031|organism=Clytia hemisphaerica|type=gene|length=6482bp|location=Sequence derived from alignment at sc0000052:206565..213046- (Clytia hemisphaerica)
AAGTTATATCACAACTCAAACCATTACCTCCCTAATCCTTCGCCACGAAA GCTTGTGTTTTTCTACAATTTTTATTTTGTAAGAAAAATCATCACAAAAA CAACAACACATCAGATCAGGCGACTGTAAAATCAAGCAGTCAAGGGGTTG CGAGTTAAAGTTTCAGAGTACCTATTCCTCTTTTCTTGCAGTGAGGATAT AGTTATTTTGCAAGAAAATGTCTTCACCATCACCTGGTAAAAGACGTATG GATACTGACGTTGTCAAATTGTATGTTTTTTACATAATTCACATCTATAT TTTACTAGTTTTTTTCTATGATGGAAAAAGTTACTTGAATTTGTGCCGAG TTTTGCATTTCTTTTAAATTTATCAATTTGCTGATGTTTTCAATGTTGTA ATTATAATATCTTTACAGGATTGAAAGCAATCATGACGTAACAATCCTTG GAGGTCTTAATGAATTTGTTGTGAAGTTTTTTGGTCCTAAAGACAGTAAA TATCTTCTTTTATTTTGAAATTCTTTTGTTACATGAGCGAGGGGTATAAA ATGGGCCATTCCAGAAATTTTTTATTACCCCGCGTCGGACGACGTGCAAT TTTTAATTTTTTCTAGCCTTGGAAATTTTTTTTTCAGTGGTGGTCGGAAA TTCTGATGAAAATCCATCTACTTTCTCAAAATGCGTCGGAAATTCCACTC AATTTTGCCTTCTATAATTCAATTGTCGTGGAAATTCATAATTTTTCTTC TCTCGCCTTGGAAATTTTGAATTTTGGTGAAAACTTTTGTCCTCAGAAAT CCTGTGTCGTCCGCCCCCTGTTACAGACAAATTCTGGAATGGCCTGGTAA TAAAATCATGACCCACTGAATGGCCTGAGCTTTTGCACGCCAATTGGAGA TTTTGAACTTGAAAAAGTCTGGACAGATGACCCGAACTGGCCTGGGCCAT CATACCGTGGGCGGGCCATGGTAAATCTCAATTAGTTTTGAAGATACAGT GTCTCAAGGATAATATAATAGGCTAGTTAAGCAAAAACTGACCCCCCCTA AAAGTTGTCAATTCAAGACGGTGTTAATCGAACAAATCAAACTCTGAATC AATTGAATAAATCGAACGTACCTTAAGGGGATTAATTTTCGCGGGGATTA AATTTCGCAAATTTTGCATGTTTTTCCAAAATTTGCGAAAATTAATCCTC GCAAAAATTTTAAAAACATTTGGATTCGCGAAATTTGTAAAATGTAATCC TCGCGAAAAATTTAAAATCATGATTTTTGCCTGAACCCCTAGGAAAATGA AAGAAATTCGGTCAAAAAGGGGCTGATTCGTGAAATATTATCCCGTGAAA ATTAAATTATTTTGCAAAAAAATTGTCTCGCAATACGTTCCCGCGAAAAT TAATCCCCTTAAGGTAATTGAATAATTGTGATTCGTTTGTCAGTTAGTGG AAATACTTCCATTTAAAGCATGTTCAAATTCACAATAACCAGTCCACTTT CTTTTTTTTACGGAAACCAAACAAGTGCGAACAAGTCATTAAAACTAAAA GTCAGCGCTCCATGGCTGTGTTGTAGGTTTTGTAATCAATTTTCACAGTT TTTTGATTCTACGTCATTTTATAAACCTCTTAGTAGGAAAGTGTGTCATT CATTAAGGAATTTTATAACACTTCATGGCAGATTAAAAAGACAATTAGAA AACGAAAGTTTCTGCGTTTTTCATTTTCACAATTATGCGGAATAATCAAA TTTTCAGAAGATGCTTTACCGTCAATTGCTCTAACTTGGGACTATCTGAA AAAACATGGGACAGCCATTTGGTCGTAAGTCAAGTGAAAATACACCCCAG AAATCAGATTTGACCAATCGTCCCAAGTTAGAGCAGTTGACAGTATTCGA TATGACGATTCTTGTTTCTGTAAAATCGCAATTCCCCATGGTTGCGAAAT GGTAGCTATAGGTAATTTATTTGTTCTTTTGCTATTTTCTTTTGTTCGGT GTGAAGTAAAGACGCTTCGTAAATCGAAGTACTTCCACTAGCTGTTTGTT GGGCGCAATCGACTGGTAATCGAATATTACCCAGGANTTTGTTCTGTGTG AAGTAAATCGAAGTACTTCCACTAACTATTTGTTGGGCGCAATCGAATGG TAATCGAATATTACCCAGGATAACTCCTTCATTTGCTGCCATTACGTTCA ATTGTACTCTATTATGCTCGATTTGACTTTTTATGTTTTAAATAAATCAC TTGTGAAAATTTGAGTAGTGGTACGACAAAAATTCCTGTAAATTATTTAA GTCCTCAAGACTTAACTCACATCTTGACTTAAATCAATATTGTATAACTC TCAAGCAAAAATATATTGATAGTAAAATATATTTCTTTCTTTGTTATCCC CAAATTGTCAATAGTCTTCCTAAGCTTTAACATGTCTTTTCTCAATAGCT CCTTACGAAGGTGGAATTTGGAAGATTCGTGTTGATCTACCAGATAAATA TCCCTTCAAGTCTCCATCGATTGGTGAGTTGTCGTGTATAAATGTGTATG ACTGATTTTCATGTTGGAAAATGGTTGTTGTTGTTTGTTTTGAAGAGTTT CCGAATAACTAATTTCATGAAGCCAAATTGGAATCGTCTAAGATGTAATC ACCCATTAACACCATGCTATTGATTTTATTTATTTTCTTTCAGGGTTTTT GAATAAAATTTTCCATCCAAATATTGACGAGGCGTGAGTCATTTTTTAAT TTGTATGTTTCTTCAAATTGAAGAAAATGATAAATCCAAAGATAAGATAA TTTTGTGATTGTGTTTGTATCTGTTATTTTCTATAGTTATTTTTCAGTTT GTTAAAATTTAAAAACGTATGTATTGTCACATACAAATTGAAATCTTGAT AATCTTTTTGATTTCCTTTCTGAAGATTTTTATAGAGATTTGCATCCAAA ATATTTATTTATTTTCACCTTTATAGGTCAGGTTCTGTTTGCTTGGATGT TATCAATCAAGCCTGGACTGCTCTTTATGGTAAAATTTTATATTTTCAGG GTCTATTTTAAACTGGTCTTAGTAATGGGTTCTAGGAAATTTACTCAAGA ACAAAATCACACCCAATCTGATTATTATTATTAAAATGAATAATGAATAT TCAGAGTGGCATCTTGAGCATGAAAAGGGTCATCAAACAACGAAACTCTA AGGTCGGACTAAAAATGATAAAGATAATTGCGAGAAATTATATCCAGGTT TGATTATAGGTTGAAGTTAAAAAGGCATTTTTCATTTTTCATGTAAAATA AAGCCTTTTTCCTAAGGAAAATTATTTCTAGGTGGTCTTTTTCTGGGCAC AGGCTCACTAAGGTGTCCTTCTGGGAATACCAAATTTCTCAGACAGAATT TTTCTGTCAATATTTTTTGAAATTTTTTATATATGGGACAGTAAAAAAAG GATTCCTTTGACATGGATCTGGTCAGAATCCTGCAGAATCATGTATTTTC TGTCCTCTAGTACTTTTTATCACTTTATAGTGCATTTTTTGAGTAGAGGG ATCTCAATTAGTAGAGAGATAATTTAAGAAGCAAGATCAAATGATTAAGT GCCGTATATCCACCCAATATTCCAGGGCCGGCGAAACCGGGGGGCTAGGG GGGCTGTAGCCCCCCCACTTTTTTGCAAAAAAAAAAAAAAAGGGGGAGAA AAAAAGGGGGGGGGAAAGGGGGGGGGGGGGGGGGGTGTCCCCCCCCCCCT TTTTTGAAAAAAAAAAAAAAAAGAGTGAGAGAGAAAGAGAGGGTGAGAAA AAAGACTTGGCTACGTTCAACAATGAAGCCAAAACGGTTTAACAATCTTT CTTTGCTCCATATTAATATAAAAATCTAACGGATAAACTTGATTTAGATG AAGTTGGTAGAGAGTTTGTGTCGACTCGAGAGCATTGCTTTAATTACTTT CGACAATTTTAATTAACGTGTACTAGTATATTCTTTGGTGATTATCAGTA TAAAAAACGCCTAACTTTTTTGATTTTTTCATTCCAATAACTTCACAAAA ATTAAATTTAGACCACTTCTAGGCCAATATAGAGTACCATAATTTCAAAA ATTTTCCGGCCCGTCGGCCCCAACCATGGTGGGGCCTCCTTAGTCTCTAT ATCATTTAGACCCCTCACTTTTAAAACCGATTCGCCGGCGCTGTATTCAG TGGTAATAACTAATCTATTTCATTCTTTCAGATTTGAACAATGTTTTTGA ATCATTTCTCCCGCAACTCTTGTCATATCCAAATCCAGTGGACCCACTGA ATGGCGATGCGGCCGCTCTTTATTTACACAAACCTGAAGATTATAAAACC AAAATCAAAGGTATGAAGGCTTTATAATGTAGTAAAATTGATCGTACTTA AGGCTAGAGTCGAAGTAAGTCACTTTGTGCAGTAAAGTTTGGACTTGCAA CAAGAAATGTAAAGTTATAAATTCAAACAGTTCTTATTAATGCTCGAGCA TCTTCTGTTTCATTATGAACTTTTTCAGTTCTAGGCTAATGGCGTGTATA TGACTACCTATGATTTTGCAGAGATCTGTGTTTCAGAGTTGTAAACTTTC TTGATTTTCAATCTTTATGATTTTATGGTTTCTTTTCAGATTACGTAAAG AAGTATGCATCACCAGAGGTACTTGGTGAGAAAGACGAGGACAACATGTC GACATCGTCTGAAAGTTCTCTCTCTGATTTCTCTGACGATGGAGACGCAG CTGGAATGGAATTATGATGAAAGAAACTCTTTTGTTGTTTGAAATGTGTG CATGGGAAAAGTAGACAATTAGTGAGATTTCAATCACTTTTTGTCACTCA TGCTTAAAAGCAAAATAAAACTTTTCTGGATTGTCAAAAGGCTCAATTCG AGATATTCTTAATGTGATGCATCATGGAAGCACCCAAAATAACCGGGTGT GTACCAATAATTTTGAATTTTAATCAATACAACTAGTGACAAACGTCCGG GCTGTTTTTTATTGCTTTCGTATGAAACATGACATCATGAATATCGTGAC TTTATAAGCCCCCAAAAAACCGTTAACACGCATCCCGGTCAGGTTAACTG AATCATCTTTGCGATTATCCAATCGAGTGAATTTTTTCGGATTTTAGCTC TGTACCCAATAAGAATTTGATGACATCGATGTCAAAAAAAGGAGTTTCCA AAAAAATCAATCCGAGAATATAAAAGAATATAACTACAGTTGACTTTCTC TAATTCGATTTTCAAGGGGAATTGGATTTTCATCGAATAAGGGACCGTAT CTAATAGTAGAGCTTCGTTTTATGATAGTTTCTTGTTGATGTTGGCTTGC AAATTATCAAATAATGGAGCATATCGAATAATAGAACGTCAAATTAGAGA GCGTCAACTTTGGGTTTTCTTTGATTTTTATTCGTCGTTGAGTTCAACAT CCATGTACAGACTTTAGGTATTGTTTTAATATGAAATCTTATAATATAGA TATGGATAGCAATTTTAGTTCTCATAGTTTACTATTTTTATGGAGATTTT TTTTCAAGTTTTTATATCTTTTAGTGGAGGAAAAGGGTGCTGCGTTTTAT CCTTTTTTTTTTTTGAAGCAAAGCTTAGATTTTGAAGTGGATATTTAAGA AAAATTTGTAAAGGACTGCCTCGGGCCTTTAAGCTTGTATACTTTATAAT GATAATAAAAAAAAGCTTCTTATTTTTGATTTGAAAGCCGCGCTGCCCTC TTTGGAAGATGTTCAAGAAAAAAGCTCCCTTTACTCCCTTGTAAATACAA TAATTTTTGGTGTATATAAGTTAGATTTTTTTCTCTGACGCTGAAACATT CAGAATTTTTTCAGCTGTAAAGAAAATATATTTTGTACAGTTGTGTAGCA TATTATCTTAATAATCATTATTATTATACTTAATGTATTGACAATTTTTT TGCCGATGATTTTTTTTGCTGGGTTTAATTTTGTGGAGTACCTTATTTTT TCAAAATGTTTCGTTTGTACACGTGACAGAAGGTGCTAGGCTGAGTTTGT CCCTATTATAGTAAATAAGGAGGTTACAAGGTAGAATTCCCTCAACTATA AGGTGACTTTTTATTTTAGCAAAAACAAGATAAAACTTCATCCGAAAATT GATTTTGCCATGGATCTATATGGAGTCAGATCAAAAACAACAAAGTCTCC GTTTTTTTAAAAACTAATAGTTCGCTTCACAACAAAAGCATCGTCATATA TGATAGTAATACTGTAAATGTTGAATAAATTTCTAGNATATTTCGCTTCA CAACATATGCATCATCATCGTTAATACTGAACAAATTTCTCGAAAAATCA AAAATCAACTAGCGGGACAAATTCAAGTCTCATTATTTTTACATTCCACA AAAAGTTTTCTAGAATTTTTCGTCGTAGAATATTATGAATTTAGTGATTA TTTATCATATTTTGATGAATTATATGTTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005327TCONS_00005327Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:206565..213046 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UBE2Hubiquitin-conjugating enzyme E2 H isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.64 5.3 2.46 2.18 28.92 23.83 38.68 41.54 25.87 24.1 26.3 18.47 26.32 18.23 11.81 15.05 27.09 33.45 16.11 20.96 39.9 41.05 15.47 19.84 21.42 25.04 41.84 30 16.74 18.26