XLOC_003033 (gene) - C. hemisphaerica

Overview
NameXLOC_003033
Unique NameXLOC_003033
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000052:274343..284555-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003033 ID=XLOC_003033|Name=XLOC_003033|organism=Clytia hemisphaerica|type=gene|length=10213bp|location=Sequence derived from alignment at sc0000052:274343..284555- (Clytia hemisphaerica)
GTTTAGGAATCCTGTTGGGATTCACAATTACGAAGAGGGCTTTGTATATG
TACCAGGAAAACACTCGGCGTTGGTGCCAAAACATAGATACATCCCTGTG
TCAAGCCCAACTGGGAAATCTGGCCAAAATTTCGTCCCTGCTCGGAAAAT
ACCCTGGAATTTCAGCCCCGCTGGGAAATTGACTTTGATTCATCCACATT
CGATATTCAATGTTTAAAAATTAGACTCCAAAACCATCCTCTCTGGATCC
CCTTTGAACCATTGAATTTCTATCGCCATTGGAGTTTCAGTAGGAATTGT
TATCCCCGCTGAGGAAAATAATCTACCGGGGCTGTGGGACAAATGTGTAT
ATATGAACCATTCAAGGATATAAACCAGTCTCTATTTCTGGAGCAGTTAT
TTCGGCAGCTAATCATCAACTATCTCTAATCATAGGCTACGTCATATCTT
CCTTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGCTATGAGCACTGCTC
TTGTTTTGAATATTGAAATTCTCCAGATAAATCGCATGCGCACTGAGGTT
TTAATGAAACAATAGAGAGTTTCGAAACCTAAGCCAATCAGCTGTGATTC
AAACATTCTTTTATTTAAAATCTCTATTGATAAACATCTTTTGTGAATGT
TGTCTATTACGTTTAAACCTATTAATAAGCAATTCCCGGTGGGGGTCACT
AGTGACCGCCTATAGCAGTGCCTATAGACCAAGAGTAAGGCCTAAAAGCC
TGGATCTGTTTATTGTGTAGACTACTCTAATCAGGGCACGGGAGAAGCGT
TACTGAAATTTTTTAAACCAGTCGGCTTTATAATCTTTTAAACCTAGATA
TATCATAAAGCAATATGTCAGGAGGTCTGGAACAGAAGACACTAACAGCC
GCTGATTGGTCAATTATTGGGATTTACTTTGCAATATGTTTGGGTCTTGG
TGTTTATGTGAGTACATGTTTCTCAAAACCCAGCTGGCACTCACAACGTT
TTTTCAACGTTTATCTAATGTTCACAACGTCCAATTGACGTTAGATTAAC
GTTAAAACAACGTTGTGTGCCAAGGTAAGCCCCTGGAAAAAAGGGCACTC
GATCTGAAATCTACCGTATGTACAAAAATAGGGTACTCAAAATAAGACCC
TTACAGTGCATGTACATAGAAAGATTAGCCAAATTTGAGTAAATTTGGGC
AAGAAATCAACCTTTACGGTGCGCATTTTTTTGAAAGGGTCAGGTTTTCT
CCCTTAGAATGCACTTTTTCTTATTTCAACACTTACAGTGCCTTTTGGAA
ACCCTGAAAACCGTTTTCGGCAGCACCTTGAGTGCGATCCTCTCCTCGGA
ATGCGAGCTTTAAACGCACCATTTTGCAGAATTTAGGAAGGATTCAAATA
AGTTTTTTTAACTCCCTTCAATTAAACTGTATTCCATAACTTGAAGTTTT
CTTAACTAAAACAAATTTGCACTCCCCATACGCGTTCGAGTTATGGAAAC
TCCATTGCAGGTCCGACGGAACAATTGTTAAAATGGGTAGGCTGAAGGCT
CAAAATGAGATAAAATTTGTAAGATTTGCTAGGAATTCGAGAAAAAAATT
TTTTTGCTCAAAAGTGGGGAGACTCCCCACTCTCCCCGCTTCCGTTGGGC
CTGCATTGTAGTTCTGAATCTTACACATTTTTGTATTTCAGTCCAAGTTT
GGGAAGAACAAAAACAACACAGCAGAAGAATATTTCTTGGCTGGTCGCTC
CATGATGTGGTGGGCTGTTAGTCATTTTTTTAATAGTTCTTTTCTTTCAA
TATTTTGTGTCTATGTATCGTATTATCTGAACTAATGTCTCCATCATTAA
ATGTGTATTCGTTAGCCTATACGTAACTGTGGTGCGATGGTAGAGCATCG
GTTCAAAGTGCACAAGGTTATGGGTTCATTAACTGGTTCATACCAAAGAG
TTCGTACTTAGTGCTATTAAGAGAGGGATCAAGGGTGAATGGAGGACCAC
AGGAAATAGTAGCACCCTCCTCTACCTTAAGACAGGTAGCTATCGAAAAG
AAGAGCCTTCGGGTTGACCATGTCTGTGGTCAAAAGCTAAAATACTTACT
GTGATAAACCATTCAACACTCAATATCCTTTACCTGTTTAGGTTGGTGGT
AGCTTGTACGCCAGTAATATGGGATCTGAGCATTTCATTGGATTGGCAGG
ATCAGGTGCAGCCAGTGGAATCGGAGTGGTCGCTTATGAATGGCATGCCA
GTTGGATTCTCCTCTTACTTGGCTTCTTTTTCGTTCCCATTTACATCAGA
TCAAAGATTTACACCATGCCCGAATACTTACGTAATCGTTTCCAGAGTAA
ATGGATGCGTATTTATTTGACGGTCGTTTCACTCATCAGTTATATCACCA
CAAAAATATCGGTACGTATAACTTATTATATTCATAGTCTTGTGGTTTGG
TAAGCACCCAACGTTTGCCACTTAGTTTTATTGTTTAAATTCCGACAAAC
ATTTGTGATTTGGTCATTTTTGGCTACTTCCGCATAACACATTACAAGAT
AGATTTATAGTGGAATCATTGTTTTAAGCTGGTGAAACTTGAAAACTATT
TAACCACAGCTGGCACCTCTGACTCAATATCGCTGCAGTGTTCCGAATAT
AAACTTTCCTGAAGATTATAGACCAATTATGATACCATTATGGATCGTTA
ATGTGATCTATTGTGATCAAAACTTCACGAAACAGATGTTAAAGATTTTC
AGTGGAAAACGCAACATCTACAATATCTCCAAAACAACGTAATCCTTTGA
CATAACGAATTTCCAGAGTTTTATTTTAAGAGAAGGTTAGGAGAATTCAA
ATATTTTTTAGAGTTGGCAAAGGGTTTCAGCTACATTCAATCCATTTCTT
TTATAGGTGGATTTATTCGCTGGAGCGCTTTTCTTACGTGAAGCTATTGG
ATTGAATATTTACATTTCTTCTGCTGCTTTACTGGTTTTCACCGCTCTTT
ATACATTGCTTGGTAAGAACAACTTTTTGCTTGGCATTGTGGGATATAAT
GACGAATCCAACCACAGGCTGTGTAGCTCAGCCGGTAGAGCGTTCGCCTT
GCAATGGGTTCGATTCTCAGTCACCATATACCAACGAAGGATTATGGGTA
ATCTGACCTGGGCAGAAAGTAACTGGCCTGTAACTGGTCACTGAGAGGAT
GTGTGGCACTCCACTTCAGCATTCGATCTTTCCCAGGAAAAGGGATAGCC
TCCTTCACTTCCGGCTCTCCCGTACAGATGGATATGCTTACTTACTTCAA
CAACCTAATCCATGCGTTATGACGAGCTTGATAATAACATTATTGTAGAT
TTTTAATTGAAGTTTTATCTGTATCAAGCACTTTCTATGTCAATTTGTTC
ACCAAACAAATGATATGACATCATTATAGCCCACGTTCTTAAGTATTTTT
ACTAAGATGCTTCGATCGCAAGCATTTTATATAAATTATGAACGGTTTTT
GGGAATATTCGTTTGTTAGCCATATTTAAAACAAGACTAACAAAGATTTT
TGCATTTAAGGGTGTATGTATGGTGTATGGTAATATTTATCAGGGTAAAT
CAAAAGCGTCAATGTTTTGCCTCTTTGGGTCTTTTTTATTGCCCTCAAGA
TAGAGGCTTTAAAATATTTATTTCTTTATTTTATTGTACAATTTCGACCA
TATTGTTTTCAGGTGGTCTGTCGGCCGTCATTTATACTGACGTCATGCAA
TGCACATTGATGGTGATCGGAGCACTATCACTTTCGATATTGGGTTTCAA
AGAAGTTGGTGGTTTAGAAGGATTGTGGGAGAAATACCCAAAAGCCATTG
GTTCACCATTGAATACAACGATGTTAATGAATGCTACTGATAATGCAACT
TTAGGATGTTATGGAAGTGTTGAGACGTATTGGGGTAACATGTTCAGGTG
AGAAGAATATTAGCATAAAGAAGTGAGGATCGCCTACAACCATAACTGCA
GGGAGGGAGAGAGGTACAAATATTTCATCCTCTCAGCTTTCAGTTTTCAG
AAGAAAAAAACAACCCTGTGTCACAGACCCGGCGGACCCCAAACGCCCAC
TGGAAAAATTGATCAAAAAATCGTTCCCGTTGGAAAAAACCCTAAGAATA
AAACCACACTGGGAAATTACCTTAGAATTTTATACTCATTTGATCATCTC
CATTGGCATTTCCTGAGATGGGAACATTTTTATCCCCACTGAGGAAAAAG
TTCGCAGGATCCAGGAGACAGGATTCTGGTAGTGAATTTAGTTTTTAAGT
TTATATGTGTAAAAGTTTATTTTCAATTTATTGAAACTTACAGACCATAC
GATGATGGTGAATTTCCATGGCCAGGAATTATCTTCTCGCTTCCAATCAC
TGGAATATGGTACTGGTGTACTGATCAGGTAACACACAACGTTGTTTGAA
CGTTCATCTAACGTTTTATGAATGTTAGGGACGTTAGATGGACGTCGTTA
TAACGTTCTGTGCCAACTGGGATAACATGATTCGATCAAGATAGTTCTTA
ATAATCAATGCTGATCATAGACGATCCTATCGTCTGACATAAAGTCACTA
AAAAATGATGACTTAGGAGGTGGGATAAATTTGAAAACGGAGATAAGCCC
GGGGTGGCATAAAAAGTTACGGAGGTGTTTAAAGTGTTTCAAACTCAAAA
ACTGCTATTGCTTTCGTCTATACCCGCCTATTACGGCTGTAACCTCGTCG
CATATACATTTTCACGCTTTCTCTATCCCTCGAACAGAAGATAAGATCTG
CTAGACAACGGTTCTTGCCTAAAAAGACTTCCTAAATAAGTGATTACGTT
TAATAACGGTGTTATCTTTTCATGTCATCATATAACTTCAAATTAATAGA
TTTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGAAATGTGGGATTG
TTTCGGGGGGATTACAATAGAAATCTCTTAGAAATTCCTCAAGGGAATTC
TATCGTAATACCCCGAAACAATCCCGCAATGAATGGCTTTTTTAGAAAAA
TCAAAAACTCCGATAAGATCTATTGCTTCAACACCAGGTGATTGTACAAA
GAACCTTAGGAGCCAAGAACATGGTACAAGCTCGTTTGGGAACAATCGTT
GCTGGATTCCTCAAACTTCTTCCTCTCTTCATCATGGTAATGCCGGGAAT
GATTAGCCGTGTTTTATATGCAGATCGAGTGGCTTGTGGAAGTCCAGAAG
CATGTTTTGATTTCTGTGAAAACAAATATGGATGCTCCAATCAAGCTTAC
CCACTGTAAGTGTTTTTATTGTACATTTCTTATAAGCCCAGATGGCACAA
AACGTCAAAACAACGTCCATGTGACGTTCCTAACGTTCAAATAACGTTAT
TTGAACGTTAAAACAACGTTGTGTGACAGCTGGGAGAGTATCAAAAAATT
TTAAAGCCTTCGGATGTTCTTAATATTTTGAGTTTTAAGCCTCAATATGT
TCTTAACATGTTCTTATTGTCACCAATTGTCTCAAGTATAAATAACTGCA
AAGTATTAAAATGCTCTTAATATTTTGGTCATTGAAGTCTAATGTTCTTA
TCAAAAAACGCACAGTCATGAAAATGAAGACTCTGTAATATTTGATGGAA
AATATGTGGTGGATTCATTGGATATTAGATTTTCTTTAAGTCTCTTAAGG
GTTTCTACAATGGAGGACACAGTCTTTTAGCAAACTTTTTTCTTGTTTTA
AGTGGATAACTTGAGCCTAGACCCCGTTGTGTGCCAGCGAGGAATCAGCG
ATTTGCTTGAAGTTTAACTGTTTCTTTTTTGATTTTGGTATGGGAATTTC
CGTTCTCAATTGAAAAAAAAACTGCTTTTGTGATTTGTTGTAGGTTGGTA
TTGAACATTTTACCATCAGGTTTGGTTGGGTTAATGCTTGCGGTAATGGT
GGCAGCATTGATGTCATCCCTCTCCTCAGCCTTCAACAGCTCTTCTACCA
TCTTTACAATGGATATTTGGCGAGTGTTGCGACCGAAAGCCAACGATAAA
GAGATGTTGATGGTCGGTCGTGTTGTGGTCGTTGTCATGGTCGGCATCGG
TATTGCATGGATGCCCAATGTTTCACGTAAGAAGTTGAACTCTCTAACTC
TACACGCTTTTTTTATATAAGAATATACTTTATAAGAGCACTTATGATGA
AATTGGCCAAAAAATTAAGATTATGGTAAGAATCCACCACCATCATGGAA
TCTTGAAATTAAACCTAAGCATGTAACAAAAATGCCAAATTTGTATTCTA
TTGTATGTATTTTTGGCTGGGATTGGATCCAAACCTAAAAATACCGTAAG
TATATTTTAAGATGACTTTCCCCAAAGTTGAAGAACCATTCTTATAAAAA
GCTGTTGAATTTCCAAATCAATTGAATGTTCACAAAAATTCATTTTCTTC
AACGTCTTCATCGAAGGAAAATTTGCACAGATTTGTGCATTTTTTCCCTT
TAAATTGAACAGAAAATAGCATGTAATAGATGCAGGAATCCTATATAATA
GGCTAATTTTCAGAAACTTTTGTTCTTTTTTTCTGTTTACAGAGGGTCAT
TCAGGGCAGTTGTTCACTTACTTGCAAACTATTCAATCGTATCTTGCACC
ACCGACATGCGCCGTCTTCTTGGTCGGCATGTTGTGGACCGGCCTGACGG
AGGTCGGTGCATTGAGCAGTATGTTGTTCGGGTTGGTGTTCGGTATTGTG
CGTATCTCTTTAGACGTGGCATACCCAAAACCTCATTGTGGACAGGTAGA
TGATCGTCCATCGTTCGTCAAATTACACTTCATGTATTATGGTAAGTTGC
ATGAAGGNGACAGGTAGATGATCGTCCGTCGTTCGTCAAATTACACTTCA
TGTATTACGGTAAGTTGCATTAACCCAGCTGGCACGCAACGTTGTTTCAA
CGTTCAAATAACGTTCACAACGTCCATTTAACGCTAGATTAACGTTGAAA
CAACGTTGTGTGCCAGTTGGGAAGGCAGAGCATCCATAATCAAGGTCGTA
ATATTTGAGAAAAAAGGGAAATCCACCGGGAAGTTTTGAAACCACAATCG
ATTTGTAAGTGCTCTAAAGTAGGTTCGAAAGGTAGAGTTTTAACTCTGAG
TTTTAGGACTTTAGGATCTGAGGATCCAAAAGTTCAAAAATAGTCCAATA
AGGCTCAGAATATAGCCTGGAAGTCTACCAACCCCTCCCAAATTGAAATA
TTTGATTAAGGTAAAGAGATAGCCCAAAATCGACTTTCTCGCCAGAACTT
GAAAAACGAAAAAATAACCGGAATTCTCATTATATTTCAACCATGATTGC
AGCTACAGAGTGCAATGTCGGCTGTTCGATCCCCAGCTGGGTCATACCCA
GACTCCGTACTTAGTTCAGAAACTCTAACTGCTACCCCACCTCTATGTTT
GTTGCTAAGCAATTAAGGAAAAGGTCAAGGATGAGTAGAGAAATCCAGGG
GAAAGTAGTGCACTTTCTTACCTTCGGGTAGACAGTTTAAGAAAAGGGAG
CTTAAGAGCTGCCACCGACTGCGTTTGCAAACTTACTTACTTTAGTTGCG
TGAAGAACTTCCTGAAAATAGATTTAGTTTCCATTAGGAACCAGTATAAA
ACCTGTCAAATTATTTTTCAAACAAACAAGCTTCTGATCCCTTTCAACTC
CTCGAACAAGTTTACGTTTCCTTTGTGTGAAATTGTGGATGCTAGGATTA
ACACCAAATGGCACGAGACTAAGATTAGAAAAAAAACATCCTTAAACCCC
TTTCTAAGTAACCTGGTGAGAATGTTACTATATGCTGAAATGCTTCAATT
TGTAGAAAATTGAAATTCTGATTTTTCAGCCAAACGTTAAATATTGGCTG
GGATTCCCACCAGGTTTGTGATACGGGATGTGTTCTTCTTCAAGACTCTT
ATTCGAGGCTAAAAAAGAGTCAAGTGAAAAGTCGATAAGTTGAATATCTT
ACTATACTAAATGAGTTTATGAAAAATGTCTGTAACGCTAGCCCAGTAAC
ATATGTTAAGGTTTTTAAAATTTGAACGCCGCGGCTGGAAAACCTATCCA
CCTTCGATACAAAAAGTCTCGCGCTAAGTTTGACAAGCGTAGAAAACTCG
GATTAGAGAAGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTGCGACGACGG
GAACCGTCTAGTTCCTTTCTATAGTAAATTTAATTGCTTACAGCGGTCAC
CTATTTGACACTGAAGTGAAAATTTGAATGTTTTTACAGTAATTGTCCTA
CCTTGGTTCAGCAGAAATGAATTGTTTTGTCTTTTAGCGTTGATCATGTT
TGCGGCATGTATCATCATCATGTGTGTATTAAGTTTGTTCACTCGCCCCG
TTCCCCTTGATTTGTTGGGCGCATTAACGTGGAAGACCATCAATAAACCT
CGCTTCAAAGAAGGCATGAAGAGCGCAGAACATACTGTTTCTGCTGATCT
CAAACTTGATGATGTTCGAATAAGCAGTAAGTTCTTCATGATATTCATTA
AGTGATGTCTTCTACGGAAACTCCCTGATGGTTTTCGCCAGTAGTGGCAA
ACAATTTTTCTCTATCACAAAATTATTAAATTTGCCAAAATGTAGGTGTT
TCCGTAAAAAGCATTACGTCATGAATATCATTGATTCCTATTCCTTCCCA
TTTCATTTATTCCTAGCTTAGCTTTACAATAAAAGTAATCTGAGTAGATA
CATAGAGACAATGGGGGACGACAATAGCACACAAGCCTAAATAGCAAAAT
TTGAGGAAGTTTGGGTGCAAAATCAAACAAATTTGGGTGCAAAATTGACC
CTTGCTGTACATTAATCTGAAAATCTTTGAGCATCGTAAGGTAAGGCAAA
GAATATGGTCAGATTTTCCAAAATTTGCCCAGAAAAACATTGGATTGCAC
TTCCTCTTAATTCTGACCTTACAGTGCATTTTCTATGGTACCCTCCAGAG
CATTACTAACAATTCTACCAACGCCTCGATTTTAAATTATGTTTTTAATT
TGGCTTGTTCAAATTTTACAAATGTTATATTTGCTTTGTTCTATTTCAGC
TTCGAACAGCCAAGTTGGTTTAAATGCCGACCAAGCTGAACTGGATGAAA
TCGAAGAATTCGAAAATCAAACCGCCTTCGCAAAGTGGGGCGTAAGGGTG
GCAGCTGGTTGTCTCGTCTTTGCATTACTGTTCTTATGGATATGGTATCG
TTAAGATGAGGAGGTCACACTCACTTGTATTCTACAAGAAAATCGGAAAA
CTTCTCTGTTTTCTTACCCATTATCAAGAAACTCCCTGTATTTTTTAGAA
ACTTTTGCACACCCTAAGATTTCCGGTTTTTAGAGGTACCCCCTCCTCTT
GATTGAATATATGACCTTATTTGGAGGGTTAAAAAAAGTTTTCTATAGCA
GTCTATAAAACTAGAGAAATGTAGTATATTTAATGCAAGACAATATTTTT
ATGCACACATTTATAGTTGAATAATATTACATAATCCCCTACTATATACT
GGAAATGTTTAACTCTTTCACAACTGCCTATCGCTAAATTTCCTGCTTTT
ATGGATGATCTGTTCGACCACAAATAATCTAAACTGAGGATCTAAAGTGG
AGCTTTCCATCGAACACAAACATTTTGCTTTAGCCGAAGCCGAGAATTGC
ATTTGGGGTTGATATACCGTGGCTTTTGAATAAATCAAGTTTTCCATAGT
ACCATAGTACTCAAGGAGTTTACAATGCTTTGTATTATATATCTTTTATT
AGAGTAGTTCCATGTATAATTGGAAATATAAAGCCCTAAAATGCTAATGC
TAAAGTTAGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005330TCONS_00005330Clytia hemisphaericatranscript
TCONS_00005329TCONS_00005329Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:274343..284555 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.02	0	0.02	0.06	5.43	4.44	8.23	5.42	8.44	8.51	32.01	32.79	11.39	14.96	17.02	25.69	34.38	30.94	25.11	25.31	4.13	6.08	11.87	8.88	0.64	0.8	8.43	5.49