XLOC_003383 (gene) - C. hemisphaerica

Overview
NameXLOC_003383
Unique NameXLOC_003383
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:948037..957853-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003383 ID=XLOC_003383|Name=XLOC_003383|organism=Clytia hemisphaerica|type=gene|length=9817bp|location=Sequence derived from alignment at sc0000061:948037..957853- (Clytia hemisphaerica)
TTTGATTGTGACTTTGGTTGATTTGATCTGTATGTATTCCAATTCATTTT
AAGAAACATGGCTGCAAAAATGTTGATTTGCTTAATGGTATTGACAACCT
TATGTCACAACTCCTTGGCTATCATATGTAATATTGCACAGACTCCAGCT
GTGTTTGTGGATTGCGCAAGTATTTAAAGATTCTTTGGATTAAAAGTTTT
CTCAAATTTACCTTATTCACNACCAAACGATATTTCTGAGCACTGGTTGG
TTCATTTAGATCAATTACATAATAATTCTAAGTTTTAACCAATCAATCAA
ATCGATTTGATTGTTAAGGATACTTTTGAATGGTTATGGGTAAGTACGGT
AATTGGTGGCAAACACCCGGTCTGTTTTGGGTGCTTCAGTATAAAACATT
ATATTATGAAAACCATAAACAAAAAACTTTTAAAAAAATGTAAATTTTAA
AGTCTTTGGTGATAATTATGTTCTTAGGAAAGATTGAGCATCCCATTCTT
TGACCATGTTCANGATGTTCGCCACTACTTTTTATTTTTTTAAATTCATA
CCGTATTCACCTAGAACAATCCAAAATTTCCCTTAAGGGCTCTGACCATA
GTCCACAAATTGATTTTGGTATTTGAACATAAAAGTTATATTTCAGGTTC
CTTAACATTTTTAACAAAGAATTGCCTTTATAAATTGCTTTTTAATCGAA
TCCCTTAANAGATTGAGCATCCCATTCTTTGACCATGTTCAGATGTTACG
GTTCCGTATCATTCCGAAACGAAACGGGTCCGAAATAAGACCATGTTCAA
ACGTTACGGTCTCGTATCACTCCGGTATGGTTTCTGTTACGGGTCGAGAG
TGTTCATATTAGTTCCAAACGTTTCGGAGCAAGAAAACGGAGCAGTTTCG
TTCCGATGAAAAAAGTGGAGCGAAACCGTTTCTATCCGTTATGCTTTGTT
ACGTCTTCTTTTTTTGACGTTTCAAATTCTGACGTTCACACTTAGACCAT
GTTCGCACGTGACGGTTCCGTTTCGTTCCGAAACGAAATGAAGCCATTTC
ATTGTTTACATTCAAGTGTTATGTCACTTCTAACCAATATAGTGGCTTTC
TATTCGTTTCAGAGCAAAACGGAACCGTCACGTGCGAACATGGTCTTATT
TCGGACCCGTTTCGTTTCGGAATGATACGGAACCGTAACATCTGAACAAA
TTTCAATTCAAATTCAAATTTCAAAACTTATTTATTCGCCTGCATATCAT
TAAAAATTTACATATTTAAGTTTGTATAAATTAGGGGAGGGGATGCAGGC
CAGGAGTCCATCCAATAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTAGAGTAACAATATTTCAATATTCCAAATAACAAAG
TAAAAAAAAAACTCAACGTAACTATCGACAAAAAAAAATATAGTTATATA
AGTAATCTTTTGTTTTGATAAATCAAATTAGAGTATTTTTATATCTATAT
GGACTTTCATTTTTCTGGTATGCAAGAGGTCAATTAAAACATGAACATGG
TCAAAGAACGGGATGCTCGATCTTTCCTAAGAACATAATTATCACCAAAG
ACTTTAAAATTTACATTTTTTTAGAGTTTTTTTTTTTCCGACGAATATTC
CTCTAGTAACATTAGGTTAATTTGAAATGAAGATGAAAAAATAACAAAGA
CCTGAGCAATCAATGCTTTTTTAGTTTCTGTCAGGATCTGTGGCGAAATA
TTGCACCAAAACGAAGGATAATCCGAAAAATTTAACCATCATAATCTTAA
TNTTTCTGTCAGGATCTATGGCGAAATATTGCACCAAAACGAAGGATAAT
CCGAAAAATTTAACCATCATAATCTTAATTAGAAAAATGACGATAAATGT
TGTTGTTAAAAAATTCAATAACATAAATTTCCAATAATAAATTCAAAAAT
ATTGCACCCAAGCATTCAATTTCAATCGGTAAAAAAAATTGAAAGTTTCA
TAAAAAATGTTGGCATTCGTTGGCGAAAACTTCTCGCTAGACAAGAATAA
TTGCCGGCTAAGCAATTTTTTATCGTCTTGCCGACGAATTTTATACTGAG
AAGGTACCTAAGAACAACTTAAGAATCTCGTGACCTTAGACTCAGACGTA
GCCTAGAAAATCTATATGTCAAATGCAAATCTTTTAAGCTATTCATTCAA
TCAAAAAAGTAGCCTATTAAAAATTAAGAACAAAGCTTATTGGTTCAAAC
TGCAACACTTTCCTACTCAAAATTTTTTCTAGATAAGAGGTTTGGAGATT
TCCATGACAACGTCTGTATGATCTCAATTATGGAGAAGACATGGAGTAAT
GTCACTTCAGGATGTTTCCCAAAACGACATCCTTTATCAAGATGTGACAC
TGAAGTCAATGTTCCTGGTAGACCAACTGAAAAGGTTTGTTTATCTGGCA
CCCAGATGTAGAAATTCTCATCCAACAGGCGAATTTTCAACATCTGAAAG
GTTTAGATTACGGAATTTCGCAAGAACGCGTCAAGGATTTTGCAGCAGGA
GGCCTGGACCCAAGCCCTCGTTTTCGGGGAATGGCGGGTCCAACCGAAAT
ATTTTCAGGTTTACGCGCAAGGGTAGTTAACCCCGACTGGGGCTGACAAT
CATTCCTATCCGATAGGAGATTAATTTTGAATTTTAAACAAAAAAAATTA
AAGACAAACGCCCGGGCTATTTTGGGTGTTTCTGTATAAAACTTTACGTC
ATGAATATCATGAATTTTCTTTATTTCTTAGATATGCTGTTGTACGGCTG
ACCAATGTAACGATGACGTATTTATTACCGAATGTCGTGATGGGACAGCG
CCCGCCGCCTTCCCGCCCTTCACATGTCATCAAAGCGTGCAACAAACAGG
AGCACCTTCAGCTGGCCCGGCCGTCAGTGGCCCTATTCCCTGCAATTGTA
AGTTCATTGAACAAGTAAAAGCCCGTTCATAAGTGGTTTAGAGTGGTCTA
GAGAGATGGGAGGAGAAATTTTATTTACACATTTAAAAGTTATTAGCGCA
GTGCTATAATTTGTCAATTATTCAAAGGATTTTTTGGTTTGAGAGACTTG
ATTTATCTGTCTGGACGAGGACTCAAACCGTTAACGAACATAAGATGAAG
TGGTTTAGAATAATCTTCCTCTAAAAGGCTCGCAAACATGTACGTAAACT
TCAAAAATTATCAAAGCGTGCAACAAGTAAAAGCCCGTTCAGCTGGCCCG
ACCGTCAGTGGCCCTATACCCTGTAATTGTAAGCGGTTTAGAGTAATCTT
CCTATAAAAGATTCGTAAACATATACGCAAACTTCAATATTCATTTCCTT
GGAGTGGTTCATTTAGCTAGCTTAGATACCGGTTAAATGGCTCTCTCTTG
ATGTCAAAATGGTTTTTAAATTTTGTTTTGATATTCTGAAAGCTAATTAA
TTTTTTTTTCGACATTTAAATTAGATTTCAGTCTATAGGCTGTACAGCGC
GGCAAGACAATTAAAAACAGTTTTTTTCGGAACTTACGTCATGTCAACTT
ACACTGAAAATTTCTAAATTATATCATTTTTGGTTCCTAAGACATTGAAG
TTTTTGAAAAATCTAACCTTTTCCTCTAATATATCCTCTATAATAATTTA
GGGTCACTTTTTAAAAGTGCTGACTTCATCAAATATAGAAGGACTAACAA
AAAAACTTTTCTTGGAAAATGAAGTTTGATAAAAGTTAGGAAAGCATGTA
AAGTTTCAAGGCAGTAGCTCTACTTCAAGGGTAGGGTGGTTTGTCCCCCC
CTTCCGTGCTAAATAGGGTTAAGCTTGAAATTTTAAAATGAAACACAAGG
TAATAAATAAAGCGTTGTTTCTCTCATTGTTTCTCAGTATCGAAAGAACC
AATGCTGGACAAATGTCATTACACCAAGACGGAGGGCAATCGATCGGCAA
TTATCAGAGGGTGTGTGCCCAAAAACAGAGCCGACCAATGTGATAAGAAG
ATGGTTAAAGGTAAGTAGGTTCCCAGCTGGCACACAACGTTGTTTCAACG
TTTATCTAACGTTCACAACGTCCATATAACGTTAGATTAACGTTGAAACA
GCGTTGTGTGCCAGCTGGGTTAAAACTTCATGGTAGGGTGGACTGGGTTC
GATTATACTGGGGATTGGCATCAAATGGCTGAAGGATTACGTTGTTAGGC
TGTTTGCATATCGTCCAATGAATACGATTAAATTCTTGCTTCTTATACTT
CTACACAGGAAAAAATTTTCGATTTCCAAGGTTGGAAATTTCAAGTTTTC
TTAGTTGGAAAAAAGATAAAATCCAATGGAAAATCCAACCTGAAAATGTG
GGACATTCTCCAAGGTTGAAAATTTTGCATTTTCCATGGCTTGGAATTTT
CGTAAATCTAGGTTGAAAAAAGCCAAAATCCAAATTTAGCAAGGTTGGAA
TTTTCGTAAATCCAGGTTGAAAAAAGCCAAAATCCAAATTTAACAAGGTT
GGAATTTTGTAAAATTCAGTTGGAAAAAAGCCAAAATCCAAGCTTAAACA
AGGTTGGAATTTTTTAAAATTCAGTTGGAAAAAAGCCAAAATCCAAGCTT
AAACAAGGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATT
TGAAACTATGACACAAGTACCCTATGTGCTTCACTGTGCGAACTCACTGC
GATTGACCGAGGCCGCTCCGAAGAGACGCCTCACTTGACGGAAACTTACA
GCTTGACTGCTCACATTATAGCCTAATATCTAGGTTAGCTATACATCAAA
ACAGTTTTGAGCGAAAAATCGCTTGTGGTTTTCNTAGGTTAGCTATACAT
CAAAACAGTTTTGAGCAAAAAATTGCTTGTGGTTTTCCCAAGGACATGCG
CAGAAAATGGTTAGAAAAACGTAATTTCCACATGGATTTTTAACGTTTTC
CAAACTGTTTGAAAAAACACAAATTTCCAACCCAAAAAGTCTAGTTTTCC
AATCGAAAGAGTTTCAATTTCACAAAAATGTAATTTTCACATGGATTTTT
AACGTTTTCCAAAATGTTTGGAGAAACACAAATTTCCAACCCAAAAAGTC
TAGTTTTCCAATCGAAAGAGTTTCAATTTCACAAAAATGTAATTTTCACA
TGGATTTTTAACGTTTTCCAAACTGTTTGGAGAAACACAAATTTCCAACC
CAAAAAGTCTAGTTTTCCAATCGAAAGAGTTTCAATTTCACAAAAATGTA
ATTTCCACATGGATTTTTAACGTTTTCCAAACTGTTTGGAGAAACACAAA
TTTCCAACCCAAAAAGTCTAATTTTCCAAGAAAGGGTCTCAATCTTAGAA
AAATGTAATTTCCACATGGATTTTTAACGTTTTCCAAACTGTTTGGGAGA
AACACAAATTTCAGACCCAAAAATTCTTAGTTTTTCAACCTGAGGTATCA
AATTTACAAAAATATGTATTTTCAGATCGATTTTTGACCTTTTTTTTCAA
TTCCAAAACTGTTTGGAAAATAAAAATTTCCCACCCAAAAAGTCATGTTT
TCCAACCAGCCTTGGAAAATTGTCATTTCTACATGGGTTTTTTTCACTTG
ATTTTTCAAGGGCATTGGTTTATTCTACAAAACCTATGGGTAATTTACGT
TTTCCAAATCAGCTTAAAGTAATCGCTCAAATTTCCAACCTTCAATTATA
AAACCAAAATTTCCAACCCAAAAATATTGAATTTCCAACCCTGGAAATCG
AAAATTTTTTCCTGTGCTATACTACCGAGTTTATATGTGTGTTTTTCAGC
GACGGAGACGAGTAATTTGTCCACATCCTGACTGACAAAATCAGCACTTT
TACCGTCCTCAATTTTGCGGGTCTGAACTGCGGATTATTCCAAATTACTT
CAGTCACTCTACCGTCCTTGAAAGTGAAAATATATAAACTTGCTACTGCT
ACCTGCTATTCAGACTGTTGCGTTGTAGAATACAGGCCTAGCAAACGCAG
ATTAACGTTTCGGTGTTATTTAGGAATATATCTCAAATGCTATCTTTATC
TAGCTCCTCTGGAAATTGTAGAGACAGTAAACACGAACTTATTCATCAAA
CTGCATAAAAATTAAAACGCTTTACTAGCGTGAGACCAATTTGCTGCGAC
CCGAACAGTCTATGGTAAAATGTTTTGTTTTTTTTAATTTAATTTAATAT
ATTAAAGGTAACGAAAAGATGATCTCGTGTTGTTGCAATTCAACCAATTG
CAATGATGACGCTTTCGTTGAAAAATGTTTGGCCAGTGCCGCTGCTCCAC
CGTTAACGACAGCTGCAGGCGCATCTGGTTCACAACAAACTACAGCCATG
CCATCAGCCAATGGAACAACAACCACACCATCAGCCAATCAAACGGCACC
AGGAGGATCTTCTTCCGCTTCTAGCAATGAAATCAACATTGCAATCCTTT
CTCTTGCAGTGATCGCTTACAAATTAACGGCATAGATGTCCGAATAAATA
CTGGCAGTATATTATGATTTATTGAAAATACAGTTGACGCTCTCTAAATT
GATCTTCAAGGGGAATTGGATTTTCATCGGATAAGGTAGTGTCGTTTATG
AGAGTTTCTTGTTGACGGGGACTTTAAATTTCATCGGATAAGGGAGCTTA
TCGAATAAAAGAGCGTCGTTGTTTATGAGAGTTTCTTGTTGATGGGGACT
TTAAATTTCATCGAATAAGGGAGCCTATCGAATAGTAGAACGTCGAATAA
GAGAGCGATATTAGAGAGCGTCAACTGTAATGGATTTAAAAGGAAACTGC
CCAAATGTGTAAGGTTGACCGAAACAATGACATGGTTTAATCTTAGTAAA
TTATTACAGTTATCGTTTACGATTTAATACACCTTTTCGACCATAGCCAC
CAATTGCCGCGCGGGCATATTTTTGTCCGCTTTATCCAACTAAAACCGTT
CCAGCCCTTTTTCGCACCAATAGACAATAGAAAAATGCGTCAAAAAAGGA
TTGGGACGGTTTTAGTGGGATAAAGCGGACAAAAGAATGCCCGTGCGAAT
ACGGTCGAAAAGGTGTATTATGACATGGATTTTGCACTGAAACAATTGTC
AAATAGGGATATTGAATTATTTATTTTCTTGCTAATTAGAATTTTACAAA
TAACAAATAAGATCGACAGTAATTGGAGCATTATGATAGAAATTATACAC
TAACATTTTAAGAATGAATTCGAATAAAATGATGTTTAAATATTCTATTA
AGTTTTCTAGATTTTTCCACTTCACTAGCCTGAAAAACGTCATGATTCCC
AAAGTAGGTGTGTTGGAAACTAAAAACAGTCTCAAACCTTTTCTACCACC
TAACCTACGGCCCATACTGCCTTGAACAAGAACCGGTGTAAAAAACCCTT
TCCAACATATGACAAATGCTATTTCTTGTCTAAGGCGTTTCGGTTTCAGT
CTTAAATATTCTTAACAATTCATACTTCTTACACATAAATAAACGATAAT
GCACGCTTTCCTTAATGGACATAGTCTGTACCCACTATGTCGAGGAGGTG
TGACGCCCAGGGTGGTCTGGAAAATAAAAAATCCAGGGGCGTCTGTTTTT
TCGATTGTGAAAATCTACTGTGGTCAGTTAAATGAGGTTAAAAATCCAGG
GTGGTCATCAAAACGAGGTTGAAAATCAAGGGTGGTCCAATAAAAGAAAG
AAAAAAATCCAAGGGGTCCCGAAAAATTGTAAAAAATCGAGGGGGTCTCC
TTTACCAAAAAGGACCTCCTTAACTTAATGGGTATAACTTTTTTTCTGGA
AATGTTCAATGACATAGCCGAAACCCAGTATAAAAACTACTGAAAAATTT
TAAACATTTTATACACTTCAATTAAGTTACATCAAAACTTAACCATCTCA
ATCATTATCCTTTGATGTTTTTAAAAATATTCAAATCATTCCTTTAAAGA
CAAATTATCACTTCATAAACAATGGGTATACACATTTTTACACTATCCAC
ATCATCGTAACAGACATCAACCGTTTTATCTTGAGGAGAGCATCCTGATG
AGCCTCGCGATAAATCCCATTTGCTTATTTTCATCGCCTTAAGAGGCAAA
GCACACAAGTTAAACTTGGATAACCAGCAACTCCGGAATGCAGTTGTGGA
TACTTTGACATGCTGATTTGACCTGCAAACATTGGTAGCTTCTTGTGAGC
AATCATCTTCGATATCCGGAGATGGTATTTGTTCAGTAAACACTCCATTA
AAGAAGATCGAAACAATGATCATAGCTTGAACGAAAGAGCGAAACATTTT
TTTTTTTTGAAATGTGGTTTCTCTTGAACCGTATTGATGATTCTCGAAAG
ATTAGAGAATGAATAAGAATCTTCCAAGTAACAAATTTTTGATTACTAAT
TGCTTAATTATTAACATGTGAATATTCTAGATCAGAAAACGACATTATAG
TGTGAAAATTTTGTAATTGGAGGATGACATATTATTTTCACATGGGGATT
ATTAGCGTTATTATTAAAATGTGAATATTCTAGATCAGAAAACGACATTA
TAGTGTGAAAATTTTGTAATTGGAAGATGACATATTTCACATGGGGATTA
TCAGCGTTGGGAAATTTACACGCTTTTTTAAATATGAATACACTTTATAA
GAATGTCCATGATGAAATGGGAAAAAAATTAAGAATAATGCTAAGAATAT
CACCATCATGGAATTTTGCTACTGAAGCTAAGAATGCCATTTTTGAGCAT
TTTCAATTATAAATTGTCAATTACCCCCAAGTAAGGATCACTCCTTTCAC
ACAAATGCCATTTTATGCTTGAGGTGTATGTTAATGTTAAATCTAGTCTG
AATTATGATCCTAACCTAAGAATGCTGTAAGAATATTTTAGGATGATTTT
CCCCCAAAAAAAATATCCATGATGAAATGGATTACACCATTCTTATAAAA
AAAGCTTGTATCTTGTGACCCGATAAAGAAACAAGCCGGAACGCTGATTG
GACCTACCTGATGATTAAAGTTAGAGCAAGTATGAAGTGCAACATAGTCG
AGTGCTTGAACGCCAAGGGGATAATCAGTAATCATTCGAGTTACAAAAAT
TCAATTCATAGAGAGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005948TCONS_00005948Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:948037..957853 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15	0.2	0.18	0.17	1.85	1.43	3.18	3.45	3.88	3.2	2.85	3.42	14.81	14.28	6.69	4.89	0.94	0.64	28.49	27.16	0.22	0.19	0.2	0.32	0.38	0.2	0.23	0.17	0.1	0.08