XLOC_003514 (gene) - C. hemisphaerica

Overview
NameXLOC_003514
Unique NameXLOC_003514
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000063:530913..539615-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003514 ID=XLOC_003514|Name=XLOC_003514|organism=Clytia hemisphaerica|type=gene|length=8703bp|location=Sequence derived from alignment at sc0000063:530913..539615- (Clytia hemisphaerica)
AAACAATGATGGAATTCCAAGAATTTGACGAGACAAAAAAACGTTGGTGG
TGCTGGATTCCAAGGTGAATAAGTGTGAAAAGATATCTTTGAAGTTCAAC
GCATGCGCATTTGCACAAAGTAATGATGGGTAAGCTATAACTTTGTTTAT
TTTTTCAATGAGTAGGAAACTATGTATCAAATTTCTCTTTCATCATGTCT
CCATTTTCGTTTATTTTATCCATTCCAATTTTCTGTAAGCAAAACACTTT
ATAAGATTTTTCTATCAGATTCTTTATGATTTGTGACGTTGTCAGATACA
TGCCATGCGTTTTTTCGTGTTAATTTCCGCATTCAAATACCAATATTGAG
ATGTACCCAGCCATCTGGGTAAAATTCAGTTAAAAGTCTCGCTTTCAGCC
CTTACTGTGAAAAGTCTTTTGCATTTTTCACTTTCAGAGGTATTATACCT
TGTTTCAAATTAGTTCTTATAGTGGATATATGCTTTCTAGCATCGACACA
CTTAATAAACCCTACAATATACTAAAGGTTATTTTACGGCTGGATACAGT
TCATGCTTGATTCATTTGTGTAAACTTTTTGACGGTATTCAATATGTTTT
GATGTGTTCGGACTCGGTTAGAAAACTTTTGAAATTTTATTTTATTTTCA
TTTGTTTGTTTCGTGGTTAAAAGTTTGCTTTGTTTTTGTTTTCTTGGTCA
GCGTTTAGATATAGCAGACTAATATCAATAAGAATCATTTTGTAGTAAAA
AAACCTACCTGGTCCATTTTAAAAATATACTGAAAATTTTAGATATTTCC
TCCTTTTTCAAAATTTGAAAGTTCGGGTGTGTAAGTCGCTTTTGGAGTAA
CTATTCGAATATTTCAATTTGGGAGAGGTTATCGACTTGCAGGCTATATT
GTGACCCTCGTTAAACTATTTTTTGAACTTTTCGAGCATCTTCTACTCTT
CCACCCTAAATCAGAGCGCTTCCAAATGGTTTGTGGTTACAAGATTTCGT
GGCAATTTCCCTTTTTTTTTCAAATAGTACGACTATGGGGTGTTTCTGTA
GAAAAAATTACGTAATGGATAAAACAAATTTACAGTGAATAGGTTATAAA
CAGAAAAATTGACAGAAAACCCTTCAGGGAGTATTCACTGTGATGTCAAG
ATGAATGAAATCACAAAAACTCTACGCATTGACTTCTTATTAAAGCACCC
ACCCGTGTCTCAAGATAAAAGATACAACGGCCACCACCCATTAAGATTTG
TGAAAAAACCAATTAACGACTTTTTAAGTGGTAATTATGTTTAATTGACA
CTTTTATAGTAACGAATAATCATCCTTTTGTCCAAACCTGCTTGAAGTCT
CCATTCATAGATTTGTGTGGACTTGTTAATTAACTGAGATTTTTGACAAC
TTTTCTTCAGTCATTTTTTTCTGTGTCAACCTTTCTATGTTTTGGTTATG
CGTCAGTTTAATGTTTTCATTTTTGGTATTATGATTATTTTATTTTTGAT
TTATTTGAACTGGAGGTATTGTCTGAATCACTAAGNTTCAGTCATTTTTT
TCCGTGTCAACCTTTCTATGTTTTGGTTATGCGTCAGTTTAATGTTTTCA
TTTTTGGTATTATGATTATTTTATTTTTGATTTATTTGAACTGGAGGTAT
TGTCTGAATCACTAAGAAAGATTTAACATCATCCGAAGGCTTCAAAAATT
TTGGAACATATACATAGTCTGAAAAGCACAATTAGTGATCTATTTTTTTT
TTCATTCAGGGGTTTGTATCCTTTCCATTTTTTTTCTTAATTTTTATGAG
ATTTAAGCCTAAAAAAGTTCTTAAAATGTTCTTATTTTCACGATCTTGTG
GGTATTTTTGCCAATTTTGCTCCTAGGAAATCGAGTGTTTTAGAGTCCGC
AAAGCCTTAAAATATTCTTTGTTCTTAACTTTTTGGCCATCGAAGCCTTA
TGTTCTTATATAGTCTGTCCTTATAAAAAAAACTTGTACAGTATATATTT
TAACATTTCCAAAGTCTAAAGAGGTTTGACTAGCTACAATGTAATGAAAA
AGACCAGATCTTTCTGTGAAACCTGACGCTTTTGTTGATTTCCACAAACG
TGTTTTGGAATGTGAAGATTTCATCACAGTGCGTCACCGTAGTGGTGCTC
TTTAAGTGGCTTCTCATATAAAGTAAATAAGACCTTTACATCAAGTCTGC
TTTAATGACCAGTCAAGTTGTGTAAAAAGTTTATGACACCTTTTGGCTCC
ACTTACACATTCTCTACTTTACGGTTGTGGTGTACGCAAGCTGATTTATA
TACTGGTATACACAAGTGTCTCGTTTGACCCATTAATGGAGATACGGTGG
TTGTATACATTTGGGAAGTTTTAATGGAGACTTTAATCCAGCAACATATA
ACATATGCTTTGCTCTGCTCTAAAGAATTGCGGCGAAATGTGACGATCTG
ATCTGCTTTTTCAGCGGATTCATTAAAAATTGTGTTGCGTTTTACCTGGA
AATAAAAGCGAGAGCTACTGGCTTCTTCTCTAATGTTTATGATTGTCATT
TCATTTTGACATTGACTTTGATTGTATCCCTATTCGGAATTCAATGTAGA
AAATTAACCTCCAGAACCATCCCCACTGGATATTTCAGGTTAGGAACAAT
GGAACAATAGACCTTATATCCCCGTTGGGATTTCGATAGGGGCTTCGATG
GGTTTCACTGGGGCTGTGAGACAGGGGTGTTTTAGTGTCAATTAGAGTAA
AGCTTAGTCTCCTTTTGGATATGACATTGCTAAAAGAAGGAAATTGGAGA
TATCTGATCGACATAAAAAGTTTTCACAAATAGTTTTAAGTTGTTCATCA
TTATCAGTCTCCACTCGAAATGTTTGTTAAGGTGGGCCTATCGTTTTGAC
AGCTTTCTAAACATACTTCTACCCAGTCTTTCTGATTGAGTAACTACTGT
AGACACACAATATTTATTGAAATACAAACATTATCGTTAAAGTTTTTTTT
ACTCTTAAAGTTGCATAAAAAATTTGGCGAGCTTTGGTATGGCTCTTGAC
ATTGTAAGGGTCAAAATTCAAAGAGTCGGTTTTTTGTTAAATTTAACTTT
GATATTTCTGAGAAACTTACCGTAAGTTGGTCTAATATCGACATCCCTCT
TCTAATTTCGACACCCTTCTTTAGAAATAGGAATAATGGGAAGGTCGGAA
TCAGTGATTGAAACCCATTTTCTTTGCTTAGCGATCTGAAAGTAATAAGT
CTTTAGCCTATCAGTGATTCCGACCTTCCTATTATTCCCATCTCTAAAGA
AGGGTGTCGAAATTAGAAGAGGGATGTCGATATTCGACCAACCTACGGTA
GTTATTACATTTTCTTCTTTAACAATCCCAATTTTGTAGCTTTATGTAGC
TGCCGTAAAATTTGAATGTCTGGAGTTTCCAAAGCCCGTTGAAAGGCTAC
TCAAGGGAATGGAGTGGAGTGTATAACTCAAGGGTGCTCTTAAGTTGTTA
TTCAACGATGTCCTCTAACACATTGGTCATTTTCCTTTCAGAAAGAAATA
GATACTACTCCGCGACATTGTTAAACTGGGACGACGAATGACGAATAAAA
GAAAGTCAAGATGGAAGTTCACGTCAAAGGTTTGTCCTTTATATTAACCC
GTGAGATCCGATTGAATTAATAAACATGTAAAATAAACCAATATATCATT
GCACAAACTCAAGTCGGCTCGTACTCTGAAAGATCTTAAGCCAGTAGACA
CCCATGTGTCAAAGACCCGCTGGGACCGCAGCCCCGCTGGATAATTGCCA
AAAATGTCGTCATTTCGGCCATAATCACTTGTATTGAATTGATTTGAAAG
GTCTTAAATCAGTGCATATAGTCTGTTGGCCGGTCAGTATAAAATGCTCT
GGTTTAAGAAGTTTATTTTTATCAGCATTTTCCTTGTTAATGATATAAGA
TAACATCAAGTTGCTCAGATTTTGAACGCGTTACCGAATAAGTAATTTTC
TTGGGACTGGTTCAACATTTGAAAACATGATCAAAATGATCAAATTAACC
AATACTGTACCTCAACGCTGAAATACTTCTCTGGGGACTTATTCAAAATT
TAAGAATATGATCAAAGTTTACTAAATAACCGATATCTCATCACTCAAGT
TAAAGTTAAGTGATAATTAAGTAAGTGTGTTTTCTTTACTGACTATGATC
AAAATTTGAGGAATTGGGGAGGTAATTCTCTAAAGTTAGTATTTTACCGC
CGCCTATAAAAAAACAAATCGAGCACGAAAAGTATTTAGTAGTTTTTCTT
CTTTTTGCTAAAAATTAATTTTAGTGTAAAAAAAGGTTGCCAAAGTTTTT
CAGTGTTGGCAGTTTGTAACTTTAAGACAGAAGACAGGCAACACATTGTT
ACTTAAACCTTTTACCTTCTTCTTGTTTCAGTCTTAATCCCCATCATCGT
TCTATTGGCTCTATTGGTCATCACTGTAGTCGTCATCACATGTTATTTCT
ACATATGGCCTTACTGTGTCAAAAGGAAAAAGCAAAGTGCGCAATACTCC
AAACTGACGGACCTGCCTGATCTAACAATGGCAAAAGACAGGCGTAAGCG
AAGAAAACCAAGACCGCCCACAATTATTCGCCCTTCAACTCCACCTCCAG
TTCCTACAAAAACATCAGAGCAGTCGAGAAGGTATAAAACGAGTACAACA
ACACCGTATTATAATGAATCAATGAAACACCTGCCTGTTAAAGGGATTGG
GACTACTCATAACCAATTTAACTTCTTATCAACCTCTACAGACAAAAAAC
CCTTGTTAAGTCCTGGCAGCAATAAGAAACCATTTTTAAGTCCTGGAGGT
GTTGAATCAGAGTTTGGAGATGATGAAATCTTCTACTTCGGTGATGAATC
GACTTCGCCAAATCCTCGAGAATTGAGTTTAATCTCTTCTTCATCCCAAA
CGAACAGCGACGAGACAAATAATAATTCATCTCGAATAACGAGGGAGACA
AAAAATCGATTCCGACCCGAACCTATTCTGAACACCTATAGTAGTAACGA
AGATCGATCAGGAATCGATTTATCGGTACCCGTTTATCGAGAACAGAAAT
ATTCGAATAAACGATCAAAATCAACGAGACAACCATTGACGAAACCAAAA
GCACTTTCAGTTTTATCACCGGCCGATGGGAAAATCGAATTCACATTATT
CTATAACGCCGATGAGAAATTATTGACAATCAATTTAGTGCAATTAAAGG
AGATTTTTCTTAAAGCAGAAAGTTTTATTGGTATATTAAGCGTTTTCGAT
AAAGACCAGACTAAAGAACGTAAGAAATCGAACACGGTACACCTAATACG
TAGCACCGATAATACGTTACAACTAAGTGATTACGCAGATACGGGCTTCC
TTATGTATCTAACGTTATTGCGACCCGATATGAAATTTAGCAGGCATACA
TCCGTAGTTTTTGGAAATGACTCTGCCATTTTTAACGAACGTTTTACAAT
ACCGTGTCAAGATACTAACTTAAAGAAATCGTGTTTGTGTATACACGCAC
TTTGTAAGTTTGGCCGTGATGGAGAACCAATTGTGCTGGGTGAAGTTACA
GTGCCTTTGAAACGTTTACAGAATTCTCAAGTTCTTCCTTTCTTGGCTGA
ACTACAATGTCCTGCACAAGAAATCGAGCTCGAGGTATGTTGTAACATAG
TTTGCAGCCCCTTTTTTAATTAGGAGATTTGGGGGTCCTTTGTAGGGGGA
GTACCAAGATTTGCCTTAAAAATTGGGGGCAGAGAATTCAGGGGCAAGTA
AATAAGAAAGGCGGTTGGAAATTTTGGTCAACTTTCTGATCGTTTTGGTG
GTGCATAGAACGCGAGTTTCCTTCGAAATTTAATTTTCTGTAAAAAAAGG
GGGATAAAATTTTACCTCTCTGCAAACTATGAATGAATACATATTTGGCT
ATGGATACACCACGAAGATATAGAAGAAGGTTAGAAATTGAATCTCCAAT
GTAGTTAAAGTCTTATTTCCTTCGAAAGTTTTAGCCTTCGGCATACAATA
AATCCTCTCTCTAATACGTTACGAGCCTTTATTATTTGAGTCTTTCTGTA
ATTCGAACCTAAAAACCTATATTAGATTACCTTTTATAGAGGTCTGTTCT
CCAGGCTACTGAAAATCCATATAAAAATACTCTCTGCAATCTGAATACCT
CTATAATTATTTTTATCTTTATAATACGAAAAAATTTTTCGAGTCCCTTG
AAGATCGAATTTTGGAAAGTCAACTAAGCATTATTGTATACACTATTACG
GCGTTTACGAACATTTCAATTCTAACTTTCAGCTTTTGGGGCCTTTAGAG
GTGGGGTTTCATGGTTGGCGGAGGAGCGGAATCGGCCCTTTTTTCGGACG
GAGTGGCGGAATTCGGCGAAAATTTAGACGGAATTACGGAAATTGGGTTC
TCTGACGGAGACGGAAAATTAGACAATTTTAGTGTGGAAAAACGGAATTT
AGCAAAAAAATTAGCGGAATTTCGGAATTGGTAAAAGAAATTCAAAATTT
GCGGAATTTTCGACAAAAATATTGAATTTCAAAGGAATTTTCGGTGACGG
AATCTTGGTTCAATTTAAGACGGTTTGACGGAAATTGGCGAAAAAATGGT
GGAATTGCGAAATTGGGTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACTGATCTGCTTTATT
TTAGCCTTATTTGAAACCAACAACAGAACTTGGTAATTTGGAGATTTATC
TTTCGTTTAACCCTATGGCATCAAAATTGGTTGTCAAAATCATTCAAGCT
TCATCGCTTCCCAAAATCGGAATGACTGGCCATCCTAGTAAGTTTCTCTT
TCTAGTCCTAGGCCTAATTTAGACGGCCGGCTTTCCTCTGTTCGAATTGA
GAGACGGCAGAAAGTTGCGTAATTTGATGCACCTTGCTTTGACTTTTCGT
CTAAATCTTTGAAAATGCACACCATGTATGTGCACAATATTCAATTAGGA
AATGTTTTGGGACTCAAGAATTTGTTAAATTAAATAAAACAAAGTAACAC
TCTTTTTTTCAGGGCCGGCTTTTCTATTATTTTTTGGCACTTTGAAACTT
AAATTGTTTTTATCCTATTTTATTTCTAGGAAATACTTGAGACTTTAGGT
CTACTAATTTGACCCTTATTTTGCATAAAATTCAGCCATTCAAGCCTCAG
CATTGTTATAAATTGTTCTTATTGGCATTTTTTGAGCCTTATTGTTCATT
TAAAAAAAAATCTAACTTTTCTCTAATTGTTTGATTTTCAGATGTTTCGG
TGAAGACAGCATTGTATTACTGTAATACACGACTTGCCAAGGAAACGACG
TCTATCCAGAAACGACAACGTTCTCCTATATTCAACGAAATGTTTGAATT
TAATTTGAGTAAAGATCGAATTTCAGAATGTGATGTTTTATTTGAGATCC
GCCATCATGGACCAATGTTTCGAACAGTAATAGGTTACGTCATTGTTGGT
AATTCTGCCGGTGGCGAAGGTACAAAACAATGGAGACAGTTGTTAGATTT
TTCGTGTCATGAGAAACAGTACAAGATCATGCCGAAAAAACCAGTCGGGT
TAAGTTGATTATAACTTTGCTTTGTTAAGGGAGTGTAATAAGGAATGGAT
CCATAAAATTAACTTAAGGGCATAAGGGAACTTTAAATTTAATTTCAACG
GGAAGTAATTTTAACGGTGTCGAAAGAAAATTTGAAAAAAATTATATTTC
GCAGGAATTAACTTTCACGCTTTTGCCTTATTTTGTACCCATTTCTTTCA
TTTTTCTATTGATTTTTCGAATTTTTTGATGAAAATTGGTCAAATTTGCA
ATTCACTGGTTCTAATTTTCGTGGTTTTGCCAAAAAAACCGCGAAAAATA
GAGAAAATTAGTTCCCGTGAAAATTAATCTCACACTACAAAGCAATTTTT
TTGCTTAAACAGTATTTTCCGTATTATGTAAAAGGAGAATAATACATGAA
ACATCTTCGATTTTCTACTTTAAATTTTTCTTCTTCAATTTTTTTCCCAC
CATTTGTAATTTTATTTTTTGCTCCCTTCAACGTCGAAATGAAGAAGGTA
AGGTGCAAGATTCAATAATCTATGGTGAACGGAGATTGTACATTGCAGCT
TGCCAATGTGAATTTAAATGGTTTTGTGACCTTTATGCTACAAAGAGCCA
AAATTGGCCAAAAACCTTCATTTCCCTAGGGATTTTTAGCAAAATTAGAT
CAATAACACTTAATTATGACCCTGCTCCCATTTTGCTGATTTTGATCAGG
AGTACCCACCCCCCTGCTCTTTCCACCCCCTCCCCTCCTACAATTAAGCA
CAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006165TCONS_00006165Clytia hemisphaericatranscript
TCONS_00006164TCONS_00006164Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:530913..539615 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.21	14.79	8.45	6.88	13.1	10.35	9.33	10.55	4.08	5.97	4.29	2.94	9.58	9.71	7.99	7.88	4.58	3.93	1.94	2.27	3.46	3.93	20.91	19.65	6.15	8.19	1.92	2.32	38.62	42.84