XLOC_003672 (gene) - C. hemisphaerica

Overview
NameXLOC_003672
Unique NameXLOC_003672
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:608097..611539+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003672 ID=XLOC_003672|Name=XLOC_003672|organism=Clytia hemisphaerica|type=gene|length=3443bp|location=Sequence derived from alignment at sc0000067:608097..611539+ (Clytia hemisphaerica)
atttagatgtgaaaaaatgtaaaataagtAGCAGTTACTGAGATGGCTGA
ATGTGTAAGAGAGCGCCCTAaagcaaagaagaaaaaagcaacaaatatac
aaaaaaatgaGTCAAAAGTTACTCCTAAAACAGGTaacattttttctatt
tttttctttattgtgtTGACAATCTGTCTGTCTTCAGCAACCAAATCTCA
TTTAATAATCATCAACTTTAAAGGTATTTACACGAATTATTACTATTTAA
TCTAGCACTATTTATTAGTATTGTTTCTaataaaaatttcattctttaaa
ttttttttaaagacaagGACTAAGTCGTACAACTTATATATGcataaatg
tataattttatattttatttgctTCTTTAAGGTGGCAGCCAACCagaaaa
ttcctttgttttaCAAGACACAGAAATTGCTTCTacaactgaaaaagttg
aaatcaaaaacaaagaaaatgggTCAGAAAACAAGGCAAAAAGTGAACCA
GTAGCTTCTTTGGATACATCAAAGAAACTTACTAGAATAGAAGACAAGCA
GGAGATTGCCTCCTCTGAAGGagagaatgaaaataaagaaatcaacaaaa
cagAAACAGAAGAGGGTGAAGCAGGTCTTCTCAATACAGAGAGTGTTGCT
GTACAATCTCGTTTGCTTCCTGCAACTGATTTTCATTCTGATCTACCAGA
AGAAAATGATGATAACCTGACAAAAAATGAACCTGAATCAGTGGAAGCTT
CTGCACCTTTTCCTTCTTTAGAAGTAACACAAGAAGATGACTCCTTAGAT
ATTCAACCAAAAGAACAAGCAGTTAACCAGTCAACTATTATATCACCCTA
TGCCGAGTCCACAGCTCCACCACCCTCTCTAGAACCTGTGGAACTCCAAA
TTACTGGTGCCATTGCAACTGCACCACCCCCTTCAATAGAACTGGAATCT
GAAAATACACTTGTCCAAGATGATATAGTAATGCCACAGAGTGTTAGACC
AAGATCTCAGGTAATGACATCAAGAGAAAGTTTACAGCAACCCTTGGTGG
AACCAATTATAGAAACAATGGAAGCATTCTCAGAGTATCAAATGAAACAT
TTCTATCACAATCAAGAATTAGAGCAGATTGACTATTTTGTTGATGAGTT
TTTAAAGGTAAGaatttatctttattttcagCAATTATACAGtatagctc
taaagctctaaaagagCATCTAGTAAGATGAAAATCAGAATGCAGATCTT
CAAGggaaatcaaaactataaagagcACTCACGAACATCAATTAGTCATA
TGaaacaaaattaataatggCACTATCGTCAATTTACGAGGCAGGGTTAA
ATGACCAGCAacttaaaataaatgaaaaaaagtcaCTGTCACTATCAACC
AAACTGAACAATACTATGGTTGATAACAGTGTTGAAATCTTATTATTCTA
GAATTCTCAAAAAGAGCAACATGAGTTTTTCGAATTGATCCAGTTCTATT
ACAAATCAAGAAGACGTCTCGGTGAAATTCTTGATAAAGTTGAGGTAAGC
TcagtattttgatttttttgattgttgtaaattattttaaagtttcTATA
CTTCTCTCATCAACACCTGTAATATTATGTCTGTTGATTTCTTTAGCCTC
TTTTTTGTTTGTCCCATCCAAACTATTTCATTACAAAGCCTTCCTTTTAT
TCCTTAGGGGTTGCAAAGTgaactgaaaaagaagaaagatgacACCTGGG
TTATCAAGCAAAATGTTTACAAAGCAGAAGTAGGAAATAAACATCTATTT
CATTCTTTAATTGTTTTATTGGTGGGAAAATGCGTGCAGTGTTTTGAAAA
TCTGGAAGTAtctaaaaagtttgattaaacatgcatcattttttcataat
tagTGCATTAAGATTAGTAACCTATTTATCTGCTAAGTGAATGACAAACT
TCTATTTAGGAAGTTTTTGAAAACTACTCACAGTTATCAAACACAAGTGA
AATACAATCAACAAAAACTAACAATAACTTTTAATCTTTTTCAGGGAACA
TGCAGCTGCGGAGTAAAAGTTTctcagcagcaaaaatatcagcaagcatt
cttccaagaagaagTTAAAAAATCGATGTCAAGTGAATTGTATACAATAC
GCGGCATTGCTCATGAGGTTTGAATGGTTTTTTAGGGggctttttaattt
tgaaatagcaCTATGTGTGACAATCCTTAANTTTTTTTAGGGggctttta
aattttgaaatagcgCTATGTGTGACAATCCTTAAATCTGAAGTGAATTA
AAGAATTTTGTACTTCTAATGCTATTTGCACGGTTCACTAGGAATGTTCG
AATCTGTGAGAAACAGTGGCCCTGTGGtagcatttttcaaatttgaatga
TATCTTTATAATGATGGTTCATATGAAAATAAATGCAAGTCATCCTGTAG
TGTAGTATGAGCTTTTTAATAAACATGTTCTATCACTAATAAATCGTTTT
AATATAACTTNctttgatttttttgattgttataaattattttaaagttt
cTCTGCTTCTCTCATCAGCACCTGTAATATTATGTCTGTTGATTTCTTTA
GCCTCTTTTTTGTTTGTCCCATCCAAACTATTTCATTACAAAGCCTTCCT
TTTATTCCTTAGGGGTTGCAAAGTgaactgaaaaagaagaaagatgacAC
CTGGGTTATCAAGCAAAATGTTTACAAAGCAGAAGTAGGAAATAAACATC
TATTTCATTCTTTAATTGTTTTATTGGTGGGAAAATGCGTGCAGTGTTTT
GAAAATCTGGAAGTAtctaaaaagtttgattaaacatgcatcattttttc
ataattagTGCATTAAGATTAGTAACCTATTTATCTGCTAAGTGAATGAC
AAACTTCTATTTAGGAAGTTTTTGAAAACTACTCACAGTTATCAAACACA
AGTGAAATACAATCAACAAAAACTAACAATAACTTTTAATCTTTTTCAGG
GAACATGCAGCTGCGGAGTAAAAGTTTctcagcagcaaaaatatcagcaa
gcattcttccaagaagaagTTAAAAAATCGATGTCAAGTGAATTGTATAC
AATACGCGGCATTGCTCATGAGGTTTGAATGGTTTTTTAGGGggcttttt
aattttgaaatagcaCTATGTGTGACAATCCTTAAATCTGAAGTGAATTA
AAGAATTTTGTACTTCTAATGCTATTTGCACGGTTCACTAGAAATGTTCG
AATCTGTGAGAAACAGTGGCCCTGTGGtagcatttttcaaatttgaatga
TATCTTTATAATGATGGCTCATATGAAAATAAATGCAAGTCATCCTGTAG
TGTAGTATGAGCTTTTTAATAAACATGTTCTATCACTAATAAATCGTTTT
AATATAACTTTAGACATTGCCTTTGGAACTGTACAACAGCCNA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006437TCONS_00006437Clytia hemisphaericatranscript
TCONS_00006438TCONS_00006438Clytia hemisphaericatranscript
TCONS_00006439TCONS_00006439Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006437-proteinTCONS_00006437-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:608097..611539 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.06	1.6	1.54	0.81	6.44	5.35	5.74	6.8	3	4.44	7.31	3.06	5.01	3.88	3.8	5.56	4.5	4.4	4.33	6.2	6.03	5.37	4.28	6.61	11.64	12.39	3.3	3.31	8.43	8.39