XLOC_003782 (gene) - C. hemisphaerica

Overview


Name	XLOC_003782
Unique Name	XLOC_003782
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000070:556516..564919+

gene from alignment at sc0000070:556516..564919+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_003782 ID=XLOC_003782|Name=XLOC_003782|organism=Clytia hemisphaerica|type=gene|length=8404bp|location=Sequence derived from alignment at sc0000070:556516..564919+ (Clytia hemisphaerica)
CCAAAATGTTGTATTTTACGTAGAAGCCAAAAGGGAGTGGAATAATTAAG
TATCAAGATGTTAGCGAGTTTGAGGATTTCATCTCTGCGTCGAACAGCGA
AATTTATTGGTAAAAATGGTTCTTTTGATTTCATTGttgaaaaatttact
catttgcACTCGATACAACTTATTCGTTAAACTCTCTAGGCTACGTTAAC
TTTTATGGACAACTTTAAATGAGAAATCAGAAATCATAGTTTTAATTAAA
TACGGAAAAAGCCAAATGGGTCTCATTGGGGGAACTTTGAATTTACTAGA
ATTACAGTAATGTACGTAAACGTCATAATATAGAGtacgttttatttttt
aggTATACGTTTACTTTCGTCTACGTATCAACGTCATATATTAACGGACG
AGCAAGTGGAAGCGTATCAACGTGACAGTTACGTCATTTTACGTGATCTT
CTAACGCCGGAAGAGAAGAAAGATTTTCAACGTATCGCcactgaaattga
aaattggcCAATCAGCGATGACTGGTTTTCCTATTTTGAAGAAGTAGGCG
GTGTGAGGCGTTTGTCAAGATTAGAAGGCTTCTACAACCACCACGCTGAC
TTAAAAAAACATGTCAAGGGCAAGTTAGGTCAAGCTGCTTCCGATTTAAT
AGGCGAGGAAGCAatacttttcaaagaaaaactaaacATGAAATACCCTG
GTGGTTTTGGTTATGACCCACACCAAGATGGAGTTGGCTCTTGGAattat
tttggtcaatttttccacATGTCAGCTGTGGTCACTTGTGATCCAATGAC
TATTGAGAATGGTTGTCTACAAGTGGTTCCTGGAGACTGGGGGGAATTAC
CATGGTTACCAATGGATATCAATGGTGATATTACAGAGGAAGTTGCGAAA
GGGTTGGATTGGAAACACATGATTTGTGATGCTGGAACTGTCATCATGTT
TAATTCTCATGTCCCTCATAAATCAGATGTCAATCAAACGGACCAATCAC
GACGCGCCTTTTTTATCACGTGGAATGGTGAATCGTTGGGTGATACTCGG
CAAAAATATTATGATTTGAGACGTGAATGTCATCCACCAGATCATTTGAG
AGATCCAAATAAAGATTATACAGAATTGATTAGAATCTTTAATGAACATA
ATTTAGAACAATCGAATGACAGATGGCAACCAGATttagaagaagaaaca
aaatgattaaattttaCTTTGGAAGTGTGTAACTTTAAATGTAAAGAAGC
CatgaaaaatcaataaaatttgtttaaaaacgCTAAAATGATGTGTCTAA
CTGATGACTGTCTAACGCGTGCCATTTGGGAGGACTAGAGTTCAATATTT
TCTAACTAAGACAAAAACAATCGTAGCGATATAGCGAGAAACTCTAAGCA
GaccgaaaaaaattccaaagtcttcagacatacatacataccgACAATAT
TTAGATTCTCAAAGACTCAGATTCTAGCTAAACCTGAAGCTGAGACTAAA
GTCGAGGTATAAAATCTTAAATCCCAACTAATTATACCGTTGAGAataca
gtagcgtagacaagacgggcgcaaaatttgtgtaggagagcagattttta
tgacacttaATTATCTAGTCATAATATAAAAAGGTAATTattgtgtcata
aaaatctgctctccccaaagacttataaccaaaacaagacgtctaagcgc
ataattatgcaaaattatctcattgttcgaacaataaaaataaatttcct
ttgatCCGCACGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATAAGGTCCATAAAAGG
CTCTaactactcttgggtacctaaataaatgggggtttggaataagccag
ataggagaatttatttattagcgGGGGAGGGGAAGTTTATTACGTATCCA
AAAGTACAGTTTTATATCGTAGATATAGTTTTAGTAAAAtagagtttaaa
aaatgtttgtatgtCATTCAAGTCCATCGTAAAATATCACGATACCCTCT
AGTTGAGTGTCTACTTCCATGATTATTATTTCTTCATTTCAATATCGATA
TTAACACATATAAGGTATATTAAAATAGTCAATCAACATCTTGTATATAT
GTACTATGTcattcaaaataccaaaaatattctcaagTTTCCAATCAATT
TAATTGAATGTCAAGAGTATGAATTATAAGATTGGGTTAATCATTCCACC
ATTTATGGAATCAGCCTTTTTAGAGTTTCATATATCTGCAAGTTTTGCAA
ACACCAAAGTTAAGTAGAAAAGTGATCAGCCATAATGATAAACATTCACA
ACATATTAGTTCTTTAACTCGCTTTAACTCATCTGTCTTTTGGTACTGTA
GGCCAGGTCGTcctcaaaagtttaaaagtgtCCTAAAGTCTTTGAAGCTC
ATCATTTGATCATCTTTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNGAAACATTTTCACATTCATTTAGATTAGAACGAAGTCAG
agtttctaattttctaatcaaagtttttctgcttcagccattttgaaaat
ttcgacgaaaattctgagaaattagtaatattgattattttttgctgact
cggcaaaacaattgtttttattgctgACGCGGCAAAATTGATTGTTTTCG
TTCACTAATTATGCGGAAACCCTGTAGATATAGTTTATNNNTCCCACACA
AATTCTGCGCGCTCTCCCACACAAATTCTGCGCCCCCcccccttgtctac
gctactggaaTATATCACCACTGAATTGATTAGAATCTTTAACGAAGATA
ATTTAAAACAATCAAATAGTGGCGACCACATTTAGAAGAAATAAAATGAT
TTGATTCTACTATGGAGATGTGTataatgaagtataagcccgaagggcta
gaagtcaatctccttggtaggacttgaagccaacaaatcctacgcggcct
tgagcggctcgcctggtttttacacaaatgacagattgaaactaaaattt
accgctaaatttcgaaaaaaatatcaattgtgaacaaaggaattgctaga
ttcaatctgtcgtcaaaaatgcggcgcattttttaaggcttcaccttttc
ttgcctgagaaaggttagagattgaactctagcccttctgactttaaact
caatggatgTGTACCTTTAAATCTAAATATGTCataagaaaacaataaaa
tttgttTACAATCACGAAATGAATTTACGAACTGCTCTGAAAATCAACTG
TAGCGGCAATGAGAAACTCTCACCagaccaaaaaatcaaaattctgaaaa
aagcACAATAAAATATTCATCCAAAGAATGagagtgtcaatttttttcca
aattcgaaCAATTTTAGGTTTCCAGGCTGCCACAAAGTTTTAACCTcctt
ttggcgaaaaacttttCCAAATCGGACTggaaatgctgaaaatgagCATT
TTGAGTAAAATACTGACCGGTATTTACCGATCACGCACGTGaccaaattg
aaattttacacacAGTACACCCCCTTcccacagacccggtagggtAGCCG
ATGATGCGCCCCGCGTTGAGAATAGATATTTGGATGTTCAGTTGTAGTAG
TAGTGAAAAGCTCTTCCAAGGATGCaaataattaaatcaaaacgAAACAA
ATGCACCAATatattcgccaaaataaaaaacgtGTCAAGATTGAGttaaa
tctgaccatttttaaTGTCTCCAGGCTACCCTGAATTTtgacaatgaagt
ataagcccgaagggctagaagcgaatctctaacctttctcacgcaagaaa
aagtgaagccttaaaacaTGCCCGTATTTTTGAGGACGGCttgaatctag
cgattcctTTGCTTTCAagtgatattttttcgaaatttagcagtaaattt
tagtttcaatctggcatttgtgtaaaaaccaggcgagctgCACTATGCCG
CGCAACTTTGTTAGgatcaaatcctaccaaggaaattcgcctctagccct
ttgggcttatacttcaCTGAGTTTTAACCTTATTTTGGCGAAAATTTGTC
ATTAGGTCCATAgcatatgaaaaaaatatttctttggaaAGTGAAAACAA
TACCCCCAGAAATTCAGCCAGAGAACAAAGTGTGACGTTTATAATTTACT
CAGCTGAGAGTCGATACCATTTATTTTCACATCTTTGAAGAGTTTGCAAT
GAAAATCGAGTCAAACGAGTTAAACATGTCAAACGAGTTAGACATGGCTG
ACAAGAAACTTGTAAAAATACTAGTCAAAAGTTtatagattttcattgga
taacTATCAATAAAAATAACATCAACAATGATACTCGCTCTCAAATCTTT
GACCTGAATAAAAAATCTTACTTATTAAGGTGTTTGTTAGATAAGGTCAA
AATTAAAGATAGATATAGAAGAAAAGAAGATGTTGGCAAGTTTGAAAGTT
TTCAACTCTGAAACGAACAACCAGAATTGGTAAAAAATGTTTGCTTTCTC
TTTTAAATTCCATATATATAGCTATTCGTTTACTCTTTTTACTTTCTAAA
AGTATGATCATAACGCaggggttttgctttgtttttggtaggctGGCAAA
TCTAAAATTAACTCTGGTGATTTCTAGATTCAAGGCCGGTGAATTCTTAG
CAAGcgcagtgtattgattagcgtaaaTATGTATTTGAGACGGCGAACCG
AACTTTTCGAACGGCGAATCGTAATTTTTTTCGTGCCTAGGACCAGCGAA
ATTCGCGGTTCGCTAGGCCTAAATAAGACTTAAGTATTCCTAATCGAGAA
AACGTATAATTTCACGATTCTAAAAATTTACGTAAAATCCAAAACGGAAA
CTAAAAAGGGGGATCCCCGAAGATTAGATGGGAAAGACATGCTGAAGGCG
GGAAACTAAACCTTGCTATGACTCATTTTTAAGGGATGTTGGTATTTCTG
ATTAATATCTCAAATTTTCAGGTGTTCGTTTACTTTCATCTACGTATCAA
CGTCATATATCAACGGACGAACAGGTGGAAGCGTATCAACGTAACAGTTA
CGTCATTTTACGCAATCTTCTTACGCAAGATGAAAAGAAGGATTTTCAAC
GAATCATAACGGAGCTGGAAAAATGGCCAGTTAGTGACGACAAATGGTTT
ACGTCTGTCAAGATTAGAAGGTTTTTATGAATATCACAATGATTTAAAAG
AGTATGTCAAAGGAAAATTAGGTCAAGCTGCTTCAGATTTAATAGGAGAG
GAAGCTGTAGTATTCAAAGATAAAATCAACTTCAAATATCCTGGAGGCAT
TGGCTACGACGCGCACCAAGATGGGTCCTCGTGGACCATGTTTGGACAGT
ACTTCCATATGTCGGCACTTGTCCCAGCAAATCCAATGACCTTAGAGAAT
GGCTGTTTGAAATTGGTTGCCGGAAACTGGGGCGAATTACCATGGTTACC
GTTAGACGAGAATGGTGATATCAAAGAAGAGAtagcgaaaaattttaaat
tggaTCCAGTGATTTGTGATGCTGGAACTGTAATCATGTTTAATTCTCAT
GTCCCTCATAAATCAGATGTCAATCAAACGGACCAATCAAGACGCGCCCT
TTACATCACGTGGAATGGAGAATCGTTGGGTGATACCCGCAAAAAATATT
ATGATTTAAGACGAGAATGTCATCCACCAGATCATTTGAGAGATCCAAAT
AAAGATTATACGGAAGGTATTCAACTTTTTGATGAACAGATTTTGGAAAT
GGGAAATAACAGATGGCCAAAAGCTGAACGAGGAAAGTATTAGAAAACTT
GTGC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00006764	TCONS_00006764	Clytia hemisphaerica	transcript
TCONS_00006765	TCONS_00006765	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00006764-protein	TCONS_00006764-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000070	supercontig	sc0000070:556516..564919 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27	0.35	0.81	0.91	0	0	4.56	5.46	4.12	3.91	3.34	2.01	5.23	3.83	16.45	19.83	18.69	14.33	7.18	7.93	26.58	28.53	35.13	33.46	16.69	19.26	36.08	19.71	135.88	83.58

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XLOC_003782 (gene) - C. hemisphaerica