XLOC_003926 (gene) - C. hemisphaerica

Overview
NameXLOC_003926
Unique NameXLOC_003926
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:104839..108431+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003926 ID=XLOC_003926|Name=XLOC_003926|organism=Clytia hemisphaerica|type=gene|length=3593bp|location=Sequence derived from alignment at sc0000073:104839..108431+ (Clytia hemisphaerica)
ATAAAATTTAACGCGTAAGTCACTTTGCAACTTTCCTAGGCCCACTTTGT
AATTTTCAAATGCAAATATTATGAAATTTGATTAGCGTAGAGTGATATAT
AAGGAGGGATCAAACATCTTCTAAATTACTTGAATTTGTCAAAAAGAact
caaaacttaaaaacacttttaatcttgttattttctcatcaataaaaaaa
tgaattcgTTCCTCGTTTTAACTTTACTTGTTGTCaccatgatgacgtca
tcagttttcgGTCACGGTTACATGAGAAGTCCACCAGCCAGAAACAGCAT
GTGGAGATTCGGCTTCCGGCAAAATGGAGCAAATTATAACGATAATCAAC
TATGGTGTGGAGGTAAAATAAAGTCTCAATTACTTTTTACTAAATTAAAA
CCACTGTCATCGAACCAGTATGTGATTTTCTATTCACTCGAAAGTTAAAC
TGAATCAGTCACTTTTGAAACACCCAAAAAACTTTCCCGATAGCGTaaac
gatgttatcgtccgctacagtgatagtaaaggcgagAAAATATGGTGGTA
TTcggaaaaaaaatcggcgggagagtttcgaagactggcaaactctactg
actgtaaactcttttcggcaaagaacccgtttgcaaattttttttcggct
ttggggttatttcttagatagtgatttgtcttagactagtCTACCAATTG
GGTTGCCCAGTCAAAAGCGAGTTTGATACAGAAATAAAATAGCACCCATT
TTTGTTGAGGTGGTCTGAAAATCAACccctcgggtgaaacaaggcatgtc
ccaaatatattttgcgtgacgcgcaccgcttccaattattcctgaacgtt
catatatagctcaaaagaatcatatcaacgagcggatttcgaaaagtgct
gggtcaaaaatttacatcaagccaatctcaagatatcggtcaaaaattga
ttttgacgttataaaatacatcgaaaaaacacgtcataaacataagtaag
attcaaatgacgtcattattgaaaaacagcgataacttcaattttattta
atgcaatcaacaccaaattttgactggagttgtaaattaatgattctgaa
atatttgttcaaaaattttcagaaaatttgaatgacgtcatttgttgtcg
ggaaaaattaaaatacgtcaaaaaatgctgacgtcatcgtgaattttcaa
ttttttttatgaaatattttagaatcgttaattAACATCtcccgtcaaaa
ttttgctttgattgtagtaagttaatcggaattatcgccttttttcaata
atgacgtcatttaaattgtctttttgacgtgttttttcgatgtattttat
aacgtcaaaatcacttttcgaaatcctctcgttgatacgattcttttgag
ctatatatgaaagttaatgaataatggaagcggtgtgcgtcacgcaaaat
atatttgggacatgccttgtttcacccgagccGATCACTAAATTGTAAAT
AGTTTTTCACCGCTTATCACTAGCTGGAAGTGATAGCTCAGAAAAAATTT
AGAGATTTGTGAAAGAAAATCTGGAATCCTTAATTTTTCATCAACATATC
gttttgataacatttttggaaaagtgTCGAAAAAACCGGATTTCTAAATT
TTCCAATATGAAAACGGTCCGTATATTTTTGTAAAGGCTCAGCTCTAATG
GCTAAAAAGCGAAATAATAGATATTGTTTACTGAGGCAAGGGATATCTTT
AGTTATCTGTATATATTTTAACCACAGGACGCCGAACACAAATCAAAAAC
GGAGGACGTTGTGGCGTTTGCGGAGATGCCGCACATCTCAGAAATCAACC
ACATATGTAAGTCTGACCTCACAAACTTTTCCCAAGTAATTTCCAGGAGT
AACGGAGGTGTGACCACAGATCCCTGTAAATCCCGACGGCCTAGACGGAG
CTGTAAGGTTTTCCATGCAAAAAAAACGTtaatattgcaaaaaatattat
tgttgCTCTTGTTTACGAAATTacattgtaatgtcacgtgacctagatGG
GATTTTCTATCTAACCACACGGCACACTTTTTTTTTAGCCAAAGTTATCT
ATCTAGCACTTCGCGTTTTATAAATTTGTGGGAGTAGTTTGTATTTGTGC
GTAAAGTATTTGTACCAAAAACCCAATTATGTTTGATCTGTGTGAAaatg
gacgaaccttttcaaggcaaaaagagattcttggaaatgtgtggaaGCCC
CTTGGAAAGtgacaaaactttcaaaaataccCTTGGTTGGAAAAATTCAT
TTCCTACCTTAAAAGTGAGGGTGGGCGAACTACAActagtcttttacccc
ctggaaattcttctccgattgccccctggaaatgttcggaATGGCCCAAT
ACAATGTAACGTTAGACTGAGACAACAGACAACTGTCTTCGGCAAACGAA
ATTagaataaaaatagaaatcatCAATTCTCGACGTTTATATTCTTCAGG
GATGGAGGTCGTTATGGAAACCGAATCATTGGCAAAACTTACAGACGTGG
ACAAAACTTTGAACTCGACGTCTTATTGACTGCAAGCCATTTGGGATACT
TCGAATTCCGTATCGGAGATTTCAGCAACAGGGATACTTCCGGTGACAAA
GAGGGAAAATTAAACGGAGTCCTTTTACGCCAAgtgagtttttgtttttg
ccGTGTGTGAAACCTATCATTTTTTCATACAAAGGCTGTTGTAAAAAGTC
AATTTAAAGACCAGAGAAATCTGGATTCGGTTCGGTTAGCTTTAGTTAGA
GGAAAGAGTAGGTAAACAAAAGAAAGGCTCTGTAATTCTCTGAAATAGCT
CGTGATAAGCACGTTCGGCTCAAATTCGAGAAATTTAGTGTGAATGCAAA
AAGTGAATTGTCTCAAACTGCCCGCTTTTCTATTCAAAGGTTAACGGACA
AACGAAATACCCAATCCGAACCAGCGGACGTAATGTACACAAAATCCACT
TGAAATTACCTTCCCACTTGACCTGTGAACGTTGTGTGATTCAATGGTGG
TACAAAACTGGCAACTCTTGGGGATGTGATGCTAAAGGCTGTGGTATGGG
TCATGGTGAACAGGAGCATTTTGTCAattgtgctgacgtcagcatttatT
AAACAAGAAACTCGATATCTcattttttgtgtctttttttataattattt
atTTGACTGAAACTTAGTATAATTTAAAATCTATTTATAATAAATACCTT
GGATGtgactaaaaataattattgattCATATTTCTTTCATCATTTACCA
TATGGCCACAAGAGTGTAACGTGGTTCAATGAACATTCCATTTCTGCAAG
GTCAAATGCCCGATATAATCGTTTGGAACAATTCTTAGCAAATTTCAATG
CTTCAACTCTTTGTTGACTTTCCCCGTGACGTGTGTGAAATTTCAAGCTT
CGTGATCCCATTTCCCTAACATAATGAAGACTGACAGAGGCATTTCTTGG
AACTCGCAATAAATTACTTCTTGTAGAGTACAATATTACACCTGAAATAA
AGAGCATATTTTATTGTGATCTTTTATTACattgaaatttaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007013TCONS_00007013Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007013-proteinTCONS_00007013-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:104839..108431 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0	0	0	0.16	0	0	0	0.06	0	0	0	224	290.36	0.41	0.4	13.5	17.84	2951.73	2798.59	102.09	103.22	84.61	96.42	191.7	186.23	0	0	0	0