XLOC_003955 (gene) - C. hemisphaerica

Overview
NameXLOC_003955
Unique NameXLOC_003955
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:394332..403708-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003955 ID=XLOC_003955|Name=XLOC_003955|organism=Clytia hemisphaerica|type=gene|length=9377bp|location=Sequence derived from alignment at sc0000073:394332..403708- (Clytia hemisphaerica)
AATTAAAAAAAAAACAATAACGAAATGAAGGAACTACAATGAGCGCACAA GACCACCTCTTGAAAACATTAGATTTGGCTTTGACGCCTACTGAAGCCGG AGCCGTCAATTTCAGTCATTTGCGTACTTTGTTACTTGGATTGATTAATT CGACATCTCATGGACCTTCAAACGAAGAAAATAGAGTGCGAAAAAACTCA TCTACCATCAAGGTTTGTATTTATATCGAGAAGACCAATCTTCAACTCGA TCATATGATTCTTTAAAATGTATCTATGTATGTCTTCGATTAGATGTTAA CCGTGATTGTGGCTTACTCACTCGATAACATTAACACACAAATCTTCTAT TATTAGAATTTCATAAATCGCTTGTCTTATTCATTATCAACGGAAAATCT CATTCTTTGAAATCTTCATCTGAAAAATTAGAACTGGGAAATGTAATTTC GTTATTTATGTTTTTATTTTTTTAGAATGTGGATGAGAAGGACAGTGGTA TAAACTTATACAAAAAAGATTCTCTGTCCAAAGGTTCTTCAAAAGAACAA ATCGACAGGTTGGTTTCCACAGTCTTCCTGTGATATGATTCTTATATTCA TATTACATCTATCCGCAGACACGTGTTTCGTCCTTCCCAGGACTCATCAG TGCGGCTTGGGTAAGCGAGTCACCAGAGTGCTGTTGTCACCAGAGTGCTC CAAACACTAAGTGTTGAGCTTCGCATAGTGAATCAACAGAGTTTACACGT TCCTTCCGACCATCACTATAGCTGGCTTATTTTCATATTATACAGTTTAG AATTTCGTATTGTTTCCTTTTTGTTGGTATAATAATGTTTATATCCCTGT CTGTCTGTCTGTTTGGTTACTTTTCTTTACCCTGGGAGGTTTTAGAAGTA CTTGTAAATTTGTTATAGTGAATGCATCAATCTTTGTTTCAGTTTACTTG CATCACAAAAAAGTTTGGAGGATCGTATCAACTCATTGGAGAACGATTTA AATTCTTATTCCAACTTCGCTTCGAACGAAAAGATTCTTGGTAAAGATGA GGATGAATCCAGCTCTGGTGATGGTCGCAAAGAACGGGTCAACTCTCTTG ATTCACTTGGTCCTTCCTGGCAGAATCTGAAGACGAAGAAACGTTTAGAA TCCGCAGAAGAAGTTATTGATAAACTATTTTCCTTAATGAACGAAGTGAT TTCTACGAAAGGCGATGGACCCGCATCGGGCGCCAATTCACAAGAAGGAG GTTTGAAAAATGATTTGACAGATCTTGCGAAAACATTGGATGTTGAGAAT AAGAAACTTGGCGAGAAACAAGACCAGTTTGAACAGAATGTGGATAGATT GACGAAAGACTTTAAAGATTTGAGCGAAGAGTTGGCGAAATTGAAAACTG GTGTCGAGATGAATAAAGAGGGTGTTACTTCAAATGGGGCACAATGTAAT GAGAATAAGAAGCTTGGAAATGAAAATAAAAGTTCGATTGATAAGAATGT AAAGGATATTGCTGATTTAAGAAAGAAATTTTCAAAGCTTGGACAAGAGA AAAATACGAATGACAATACCCAGATTGTTGAAACCAATGTTGGAGCTTCG CAATCAAATGTGGAGAATATTGAAAGATTGCAGAAACAGATTGATGAACT ATCCAACAAATTAAGTGAAAAGAGTGAGCAAAAAGATCTGACAGAGCTGG ACAAGAAACTTTCCGATCACCAGGAGAAAACGAGCAATGAACTTGAATCA ATCCAAAAAGAGATTGCAAAATTGAAAGAAGGAATGTCGAATTTGGATAA TGCAGAAATGAAAGAGTTGATTGACAGTATGGATGATTTGAAGAAGATGG CCAGAGAAATTGAAGATCTGAGGAAACTGAGTGATCTGAAAGATCTGGCG GATAATGTACATAGTCTGAAAGGTTTGCTTACCTTTTCGAGTACCTAAAT TTGCCATTAAAGCTCTAATTAACTCTAATTGGTTCGAACTACAAAGATTG AAATTAGGGTTTGTATGTATCATATCATTCTGATATGCTGTTATGCAATT CATGATATTTATGACGTAATGTTTTCTACGGAAAGGCCCCGGTTTTTGCC CGTAGTCGCACTTTTTATATACCTTTTGTCTGGTTTAAAATTTTCCACTA CTGGCAAAAACCGGGGTATTTCCGTAGAAAACATTGTGTCATGAATATCA TGAATTGTACAATGTTTATGCTGTTTATCCGTTTTAGATATTAGGTCTGA ACTCGATATGTTGAAGAACCTACAAAACGATTCGAATGACAATCACAAGC AACACATTGAAGACTTGATCAACAAATTGAAAGAAAACTCGACAAACCAG CACGCCTTTGATGATGAAATAAAGAATCTCAAGGAAGCATTGGAAAACTT GAATGCGTCGGTGAAAGAGATTGGAGAGAAACAAATTGATGTTATGAATT CCGCCATCGACAACAAGAAGGATGAGGCTTTTGAGGAAAATACTGATGCT ACTATAGAGAACAAGGTTCGCACTTCTCGCTTTCTTGTTCTGCCTGGCTC ATTAATTTGTTAATTCTTTCCATAATAGTTAAAGCACATTGGTTCATCAA CTACTTTAATGGCAGAAACTTTCGCGTTTTTGGCATTTTTTCGCGTTTTT GGCATTTTTTCGCGAAAGTTTCTGCCAGGTAAGAAATTAAACAAGAAATT CGCGAAAGTTAATTTCGCGAAAAATGAAATTTTCCTTAAAATCGCGAAAG TTTTAAAAGCCGAGGAGAGTCGATATTATCGATATTGTCGCAGTGACTAG GATTCGGAATGGGAGGAGAAAGTGCAAATAGTTTATTCTTCATTTATTAG CATATCACTCTTTCGATTGAAGAAAAAAATTAGATTTGAAATAATTTTTT ATTCACTTTCCCTAGCCACTCGCGAAAGTTATTGGTACTAAAATTTAACA TTCACAAAAAACCGCGAAAGTTTCTTCCGTAAATTGTCTTCAAAAAGTAA AAATCGCGAAACTTAAATCCGCGAAATTTCGCGACTTTTCGGTCTCGCGA AACTTTCTGCCCGCGAAAGTTTCTGCCCTTAAAGTAGTGAAGAACAATCC GGTCGACTTTAATTATCCTTTTGTTCTAAGCCGCGTCGCACCTTTGGTAT AATTTTTGACAAATTTGTTAGTGGTGGTTGAAATTAAAAATGCTACTAAG TAAAAAGTAAACGTGTGATTTCAGTAATTTTAGTAGTTGAAGGTTAGGTT CTTCTGGTCGAAATTTCTTTTTTATAAAAGAAGACTTTCCTTATTCTTTT CCACTTAAAAAGGACTTGAAAAATTTCGAAGAAGAACTAAGCAATTTGAA AGAAGCTCAACAAAGACTAGAAACCATGCTTCAAAACCTCATCAATACAA CCAAATCGAGGGAGAATGAAACTAATGATAAAAACGCCAACTCTGTTCCA GGTTTGTACCTACCTTGTATTGTTGCAGATCGTGATTGGTAATAGATTTG CGAAGGAGAATGCTTATTCTCACCTACGTTATTCGAATCTCATTCGAAAG AGTAAAATGGTGATTCCCCTCTAAAAAGAAGAAGCCGAAGGAAATCTTAA TAGTCTGCATGATCTTTTCATACGTTGTCCTTTCCAAAGAAAACCTATAC TTCTGGAAAATATTCATATTTACAATAAGACCCGATGAGAGAAGCTTCAA TTAGATCGATATGCCAACGGTAGCTCTCTAAAATGACTTTGTTTTGTAGC AATTTAGAAGAAATTCTTTTTTTGATGCTATTGCATTCTATTGATATTCT ATGTTCACGAATTTTTTTATATTTTTCCAGCATTTGACACATCAGTAGTG GCTGCAATTCAACATCTCGCTCAACAAAACCGTCAACAAATTTCAGCGTT GCAAGCTGAAACAAACTTGTTGAAGAAACTCCAACAAAACAACAACAACA CGACGCATGCGCTAAGTGAACCACAAGTGAACGGTGATACCACACAACAA AACACGATGTTGGAGACTCTTCATAACCATTTGATTACATTACAGGAGGA ACAAGTGAGGCTGGCTGGACAATTAGCAAACATGCTGGATGATACCAAGG ATGAATTCAATAGGAAACAGGTACCACTTATTTCCCATCTGAAACGCGTG GCCCGTGTAGTTTTCACACACACGCTGGATTGAATAAAGCGCCAGTTATT GAAAGAAATGTCACGTGCAAATCAAGGAGTGCGCTGGATTTAAAACTTGA AATAGGTTGAAGATTCTACTAAACCCTTTGGCCTTTTTATTTATGGTGTA TAATTGGCCTTCTCGAAGAGTACAAAGGTACTTTTTCAAAGCAAAGAAGG GCTTGGGCTTTCGATCAGGTTAGATAAGCTAAAAGAAATGAAGAATCTTC GAAATTTGTTAGAACTATTTATTTGGACGTTATAAACACCAGAATGTCTA CTAATGAGAAAACAATCCTTCTTCCTTCTTGCCCATTCAGCAACACATTG ATGCATTGTACGGGTATATCGAGAAACTACAGAACAACAAAGCAGACAAG CAAGATACCGATTCCAGCATCAATGTCAAAGCGGACAAACAAGCTCTGGA TAGTAAGGTGGGTCTGAATTTATTTTTGGCGTTTTCTCTCACGTGATTTA TAAACGAGGGGATATAATAAAGGGNTTTTGGCGTTATCTCTCACGTGCTT TATAAACGAGGGGATATAATTAAGGATTGAAATCTTATCTTCAAATCTTA TATACGGTGAAGACCAAATTGCCAGGGGGTTGAAAATTGTGCCTCTAGAT ATTAACAAGGAGGTATTTATTAGCTACCTAAGAGTATCTCAACTCCACTT CCTATTTCAATTCAAACAATAAACTAGTGAACTTTATTCTTTTGAAATGT CACGTGTCATACTTCTCGTAACCTAAATCACATTTCGTAATTGTCTACTT CTAACTTTTACAAAGACAATACAATTACCCTTGCAAAATGCTAAATTTGC AATATTTTGAAGGGTAATCTTTCGTTTTTGGGCATATGAATCCAAAGTTT TCGCTCATTTACTATCCAAAGGACTTATGAAGCATTTTCCCGGTGACGGC TAGTTTCTTTCCTAGGTATTAATCATGCAATTCACCAACTTTTATTCATG ATTCTTTCTGAAGGTGAACATCAGCACATTTGATGAACGTTATCAACTGT TGGAACAAGCTCTTCAGAACGCCCTTCAACGCCTTGATCAATTTGTGGAG AAAGAAAACACCCTCAGTAACGCCCTTGATAAATTACATTCCGATCTCGA TTCCAAAATGGACTCTGAGGCTGAAAAGAAGTTGAAGAAATTCATGGGTA TAATTAATTCTTTCTGAATTTTTGTTCCCCAAATTGAATTGCACTAGCAA TGTTGTGTATATAACCTTTCGTGGACAGTAGAGTGACTGAAACGATCTGG AAGACCCCAGAGCTCTGACCCTATCGAGTGTGGTAGTGCTGGTTTACCGT CTTCATCAGTCAGTTAGGATCTAGACAAAGCAAAGCTAGCTGTCTTCATC GCCAAAAAACACTGATACATAAACGAAAACGAAACGTGATTGGTTTGAAA CTCACTACCCAATCACAATTTCCGTTCCTCGCGTTGAAAATTGGATCACA TAATCTCACTTTATCCCGATTAGAGAATCTGGGAAAATTTACCTTACTCT TTATGTGTATCTTTTAGAGGATCGTTTGAAAGAAATTCAGAAATCGCGTA CCACTCTTCATCACCACGATGACGTCACAAATGAAGAAGACGCCATTATG CTTCAATTACGTAATGCAGCAGGGTTACGGAAGCCGATGTCGCTTCTTTA TAATTGTATATCATGTGATCGACCGGTCGATATTTCGATGCGAGGGGTGA TGGGTTCAGTTCCGCATAACTTTCCCGCCAAAAAATCGATGGGTCCCTAT ACGTCTTACGATTTGGAAAGTGTAAGTTTCTCTTGTTTATTTTTCCATTT ATGAAAACTTAATAGAATAGGGCCTTTTAAGAAGGGGATCTTCTCATAAG AATGGTCAGTTAATCTAGGAATGCGATTCGGGTCGCCCTCTACTTCGGTC GCAAATTTTCTTACGCCGATGCTTCCAATTTTTTACCGAAGAAAAAAGTG GATTAAATTTTGGATCCATTTGTGTCATTCATTACGGGCTACTTGTGCGT TTTGATCACGCGATCAAAAGCTCTGTTAATATTTTATCCAATTGGCCACA TGCACTTCCTTTCTTTTCTCCACAGCTACGAAACAACAAAAAATCACAAC AGCCACAGCCACAACAACCCTACGAGCGGTCGAACGGCCGACAGTGTGGC GGACAACACACCACATTCAACTCGACGACATTAAGAAATCAAAAGAATCA ACAACAATATTCAAATGGTATGAGCAAGCCTAGGCTACCTTTGATATTTT CTTTCGTTTCGAGCGTAAACCCCCTCCCCCTACTCTTCGGAATATGCGCA CTGCTCTTCTTTCGATTATTGAATTTTTTCAATTTTTTCACATGGGTACT GAGGTTTCAATGAAAGGCGGAAGGGAGCAGGACTTAAAGTCTGGAGTTGT CGCACTACACCTTGTTCCCCCTTGTATTTCGGTGTCCTTTCTCAAACTCA CTGCGAGGGTTTACTTGAATAGTTCTTATCGAGACCTGCTCTCACTCCCG TTCAAGTTTATATTCTAAAATGTTTACAAAAAATGTTTTTTTACATATAT TTGTTGGACCAACATCGGGTCTTTCATTAGCATGTCTATGTCCGTGGTGC TGTTTGTGAGTTTCAATTCAAGATTATTTTAGAAGAAACGGCACATTGTA TCAATCAGTACGGATTAGATAGATATGCCCTCCGATGCATCGGAATGGGT CCTACCCACGACGGAGTAGGAATCACAGCGCAAGCAGACATTGCAACCCT GCAGATGCGAGCTGCCGAGCCATGGTGTATACCACGACACTCGAACTACG CGGGAGAACGGATGTCCTCGCAGGTGTAGAACCTCTTAAGTGTCTCAGCA CACCACAATGTCTGGAACATCTACCCATACTCTTTTATCAGAGTTATGGT ACCCAATTCCCCTCACATGGCATGGGTTGACCCGGGCGAAGGAACATTTA CTTGCCAAGTGAATCGTAGTGCCACGGTGGGTATCGAACTTGGGCCTCCT GAACAGAAGTCAAGCACGATAACCACTATACCACAGTACGGATTATAAAT TGTACGTTTTACACTCGATCAACGGTAATCGAGAACACTAAGGAAATACC AATGTTTCAACGCTGGGCCTTCACGCCGCTTTCTTATCTATTTTTATATA CCCTATCTTTGTATAGAATTCGTGGATGCGGTAGAACGAAGCTCGCTTGA ACAACAAGATTTCTCAGTCATTGATTGCGTTGTTGGTAAAGATGGTCAGA TCTATCGTGGACGCTTCAAACCGGTATGTCGTTTTGTTCCTTGTTGTAAA GAAGCACTGGAAGCACTCCTGCTCCATGTATGACTTCTGCTGTATACTTG CAAACAAAATGATGTACACTTGTTCCCAGGTTATAACTTTCCATATAGAT TTACCCCAATTTCATTAAACTTACTTAATTTCTTCATTTTCTTCACAACA GGGTCCGTTCACTCAGCCGGCACCGAAACGAGCGAGTTTGAGCAACAATC GACTGAATAACAACAACAAATATAAACAACGTTACACACATTCCGCCACT ATACCCTCGCAACACAAGGTAGGTGGTGATCTTCACTCAACACGATATAT CTAAAATCCTAGCCTTGATAATTCAGCTTTATTGAATGAAACATCGTGTA ACATGCTATAAAAATGTTCGTGGTTTTTTCGAAAAACCAATTTTATTGAA TTTTAAATTTTCACTTGACTACATTTTATATTCGGTCTCTTCATCTTCGA ATACAAACAAGGTTAGATTTTGAAGGAAAAGATAACCAGTTCAATGAATT TTCTTCCCCTGTAGGAGGCAGACTTACAATCGCGAGATGAGAGTCGCGCC TTATCCGCCAATGGTCACGTGACCGAAAAGATTCCTGTTACACCAGTTCA AAATGGTAGCCCATCACCGGTTAGTGGGTTAGCACGTGAGAAACAACGAA CGCCAAGCCCATTATTGAATAAATCTTTTACCGGCAGCCGAGAGAAACCA CGTGAGGGGAGTCCCATTGTTCTCCCACCAATCAGTCGCGATGGAAGCCT GGTGAACGATGAACCAACCAATGGCGGAGGCTCGTAAATAAATGCCAGAT CCATTATACTGATGAAGTTAGTTCCCTAACTACTTTGACTTTCGTTTCAA TACACCTAGCAACCTACACTTCACGAGAGGAATGGGTTAAGAGCTTTGAG GGTAAGATGACGTCAAGTGACAGAGTTCTTAAATTCTATCAGTGTAATTA ATACACCCCTGTATTAATGACCCGGTGAAGTATTGAAATGCAACGGAAAA TCAATTCCACAGGGTTTGAATTTAAAATCTAAAAATCTCAGTAGGTGAGA AATTTTAACTTAAAAATTGTCATTTCAACAGTTGCGAGTCTGGTTTTCCT AAAATTCACTAATGTGTATTTTTTCGATTTTTGACTGGGGTAGAGAACCT CAATATATTTTGACCGGGTTCACTCAATAATCCAATGCAATGTTTTTCAC TGGGTTCTCCACCGGGGCGGATCTTACCGGGTCACTTTTACAGGGCTGTG CTAATTCATACATTTGGTGTCACCTGACCCTGGCGAACTCGCATCCAACC CTCAAGCAAGAGTTGATAGGTTTATTGCGAAGAAAACATGTCCTTTTGCT AGGAATATAGTATGGTGAATGTAACAAAAGTGGGCTTGATTAAACTGAAG AAATTACCTGCATTATAGTTCCTTCAAGCTACTGAATTTGTCTGGCTGTG GCTTTGGCTATTGATCTTTAAGATCATCNATTACCTGCATTATAGTTCCT TCAAGCTACTGAATTTGTCTGGCTGTGGCTTTGGCTATTGATCTTGAAGA TCATGATTTACTACCGTGGACCATCTGGTCTTTTTCTGATAAATTTATTT TGCCAGTTAATATATTTTTTGAATCATAAAATCTTTTTAATATATAACAA AAATGTGTAAATAAGAAGGTTTGAGTTGTATTTTATACTGTAATGTTTTA TTGTTTATAGACTTTAAAAGTGTCCGTGAAAAAATGACCGCTTTTTGTCT TGTTAATCGAATTCCGGACAAGTTTATTTATTGATGATTATATTGTGGTA CCGATTAAAAAGGTTTTAACAACAATTACTGGTTTTTTGTTTATAATGTT TTAAATGTAGAGGTGTCACCTTATTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007069TCONS_00007069Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:394332..403708 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.11 4.56 5.21 4.54 50.38 39.2 28.89 29.33 21.35 25.36 15.23 20.83 6.29 6.32 4.08 7.1 5.64 7.85 10.61 10.04 8.51 8.07 7.16 8.1 28.22 25.76 5.73 6.27 2.74 2.81