XLOC_004013 (gene) - C. hemisphaerica

Overview
NameXLOC_004013
Unique NameXLOC_004013
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000074:416850..422521+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004013 ID=XLOC_004013|Name=XLOC_004013|organism=Clytia hemisphaerica|type=gene|length=5672bp|location=Sequence derived from alignment at sc0000074:416850..422521+ (Clytia hemisphaerica)
aaattatgtgaaaaaaaatattcaccGACTTGACTGTAACTTAAAAACTG ATTATGGAATTGAggtgaaatgaaaattttaacatacCTTCTACTTCTAG CTTTATTGGTCTGGCAAAGTCTACAAAACCAATCACTCACTTTAAATTTT GGTTCACGAGGAAAGAAGTTTATTTCAGggaaaattttgttggctttgAG TGGAATCAAGGCTCCTCATCTTTGTGTAGCTAACTGTCTGGTAGGTAGTA TATATTCAAGATATTTTACGCGGAATTTTATTCATTCCCAGAGATGACAT AAacactaaagtctattcacgataagtgtgcactcttttttcatttacct ataacttttgaaggaattcctcaatctttataaatttggtatcgttggaA AGATATTAGTGAGTGGAACAATTTGAAATAAAAAAACCTATaaagaaatt ctaaaaatgaagatgaaaatgaagaagaaaaaaatgaagatcttgtagaa aggtgatataactatcatttttacTGAAGTGACTCCCTCATTATCAAAcg ttatcactgtgaaaaaatttctcaaaaataatcattcagtcaaaatatat caaacaaagttataagctgattgacgtctaaaaacgctgttttctgctgt tttctgcagttttttggcgtcaatcacttattaactttgtatcataactt tatattgaataaatattttaatgaaatttcttcacagtcatgacctccta agatcaaagaatctctccagtgaaaatgaaagttatagcacttctctata agatcttcatttttttcttcttcgtttttagaatttttttaaagactttt ttacttcgaattgttccactcacaaatatctctccaacgataccaaattt ataaagaaggaagaattctttcaaaagttatagctaaaagaaaaaagagt gcacacttatcgtgaacagactttaattcTAATTCTAAGACATTAGTTGA ACCCAGAGCCTGGAACCCTGGACTATGCGAGAGTACTAGCTTTTCTTTTT gctaatttctattttttttctacagGAAAGAGATTTGGTAGACGAATTTA ATATGTGaaactgtaaaaaaaaaatttaagtttcCCACCCATTACAAATC GTTGGGGTAAGACCCTGCAAACACAATTATTAGTTTGGCTAAAAAGACTA CATTGTTTATATTTAAAGGCGTTCGGAGCAGAGAAATGCAAGTCAGTCAA TTacaacaaaaagacaaaagaatgtCAATTGATGgatgaaaatcaacaaa atgttGAAGATGAAGACAAGTTTGAAAACGATGAAGATTGGGAATATTAT GGCGAAAAAGAACGAAAGGTGACATTACTTTAGATTATCATCACCTTCTC AATAAGTACTTGCTGGAATTAGTTTCCACATTAGACATGCAAGCGTCGGC TTTTTCTTAGACACGTCAGAATGATCGTTATAAAAAGTTCTTACAGAAAT AAATTACCCCGGGAGAAAGAATTGAAAGCTTGTTCAGTATACATTGGAAC CTCCAAAACTACGAGAGGTGTTTTCACATCCTCATCTAAATGGAGGCTAT ATGTAGTAGCAATCGTGATATGCATTGAGAGACTAATAATTTAGCAACAT TAAATTTTTAACCTTGGATAAAATTCGGTTAGTTAGGGAAAATTGGGAAA AGTTTTGAGGTGTATTCTTTGACTTATACAATAACATAACATGTATGCAA ATCTGTCAATCTGATTTTTAGATGGAATGTTTTTCCAAAGGTGACAGCTC ACTATGTTGCATAGCAACACAAGATCGAACTTGCCAAAAACGTAAgaaat ttttatgaaagttatgtcaaaaataaataatgatTAAATCGTCAGTGAAG ATAGGGATCCGATCGTTCATCGTTCAAATGCTTTCCATGTCTGGAAGGGA TTTGAAGACAGTTTATTGATGGGAACCTTTCAAACAACAAATCTGTAGAA TGTTAATGAGACACAATGATAGTGTTCCAGATGGTGAATCAATCCAATCA ATCAATTTAATGTatcttaagggctctggccatagtcagaaaattgattt tagtatctgaacataaaagttatcttttagattctttaacattttcaaca aagaattgcctttataaattgctttttaatcaaactccttaagagtaatt aagaacttaattgcaaaaatgacgttatgaactttaaatagacgttaata atatgttgcatcaccttcttttataaaaagtgctaagttttaatgggtaa ttaacctttttctttcgaacttttttcgaactattttaaattttgcggaa aatctttctaaaaagatgtgtcaaaagttatgactgttttttaagcaaaa tccagatgaaaaattgatgaaaaaccactaNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtaaaagatacacc aactactgcaaaaaatttttaaaaatgttttttcttcgccgaaactaagc tcttcaaagttgatatACTCTTccttgcaaaagtcttcattttctttcca tcaaattttttcaatgcaatttttgaattttcagatttgggaatagtttg tctaacagaaaatgtataacatgccatagttttgttggttacatcagtca gaaaacacattttaaacacggcaattatgaaaaattcactatggtcagag cccttaaatttaattttattcattttaaatTTGAGCCTTATTAAGAAATG GTATATCTGATATAAAACTGATATATCTCTCAAAACGACTGGTGATCCAA CTGATTGACTAAATTAGCTTAGTAAAGCTGCATTAATGACCATTCATTCA ACTTCAGTTAATTATTTGCGGAGGCTATCATATGGAAGTCCACATTGTAG TAATCTTTCTTTTATTCAGCTTGGGTATGTATCTTGGGTAAGGTTTCTTT ACTCCTTTACGATAttactttttttccatttctttttcttttagcgCATA ATTGTTCAGAAATCCAATCATCCTGTTCACATTGCAAACCTGGCTTTTAC TCCATGTTGGATGGTCGCAACGTATTCTGCAATTTCAGCAGTAAGTAAAG TTGAAAGTTCACTTTGTTCTTAGCATTTAAAGATCGCTTTCTTTGCTGGC TGAtactttaaaaagaaaggtCNATTCTTGGCATTTAAGGATCATTTTCC TTGCTGGCTaatgaggcccccccccccagcggacactcaattcacgcaat cacgcatttttttttccgaattcacgcattcacgcaaattttcctcgagt ttcacacaataatccgatttttcagaaaccggaattttttcgggaaaaat cggggaaacataggaaaatcggggaaaatgcaCATAATCgttggaaaaaa gggaaaattcacgtattcacgcaatcaaaaagtggattttcacgttcatg caagttttttcaattcacgcattcacgaatttttttttcaattttcacgc attcacgcaaccgaaaatgcccattcacgcattcacgcaaactgcTGGGG GGCGCTAATACTGTAAAAAGAAAGTTCATGCATGTACAATGCAACATTGC ATCACATCTATTATTTCAGCAATGGATGCGATACGAGACGATTATTTAAC AAGGCTGAAAATTCACCataacctaagaacaaattaagaacactCTGAgc ttcagatttcagaaattactaatATAAGACCGATTTTaacagatttcaaa taaaaaaataaccctattaagaatatcttaatataaatttttttagtgtt taaggggggggggggggggggagggagGAGGGGGGTCACCTCCCTAGTtg caaataatttttcaaaaaactttaacAGTGTTCTTAAATTACTCTAAAAA TGTTTCCATAAATTGTGATGATAATTtggtatttcttttaaatttaatag gaaattgcatattttagagCCTGCAAAGCCTTAAGATACTCTTATAATAT TCTTAAACTTTAGACCTTGTGCTCTTATAGACTTTGTTCTCattgtaaaa attttgatcGTTTTAGCTGATGATGCTGTCTCGACTTGTAAAACAATCAA AGATGTGATTCCAACAACATCTTCCGGATTTTACTTCATTGCATACGGTC AATACGTTGTCGAGTATTACTGCGATATGACAACAGATTCAGGTTAGTGC CATCTGGTTGTCATCATCTCTCATTAAATCTTTCATATGCTCAAAAGTGT GAATGTCATCATTTTAAGTATCTTCTATCATTTGCTTACAAAGCGAAATG AAATCATTTAACCTATTTCCTACTATTTGCTTCATAAACAAAAGAAGGAG TATAACTCCCGTACCGTGTAAATTTGTTTGCgaattctgctttgtcagca taagagCAACCTTCCAAcaaacctaattttttatttcatgaatattgccc ttatgtattacaatgaGGTGAATACAGTCGTTGTttaacggttctggtgg ctggtcagaaaacaatatgagagcgactgtattcacctcattgtaatttt ttatttgttttaaaacGTGATAAAAAAGCCGTTTTCATCTAGCAGGCTAT CATAAGAGCCGTGTGGGTCTTTTTTTATTCGGCAGAACTCACAAAATTTT TTCCGCTTGAAAGAATCATGTTAATTTCGCCTCATACATCTGTGCTTTAG CCACCGTAACtgtcttttaaaatttcaaaatagcgGCTGTGAAAAAAACA CAAGGTCGCTACTGTATTAATTGTAGAAGAAATTCCAATTCATTCTTTCT CTCAGGTGGATGGACTATGTTTACCAACGTCACAGTTGCAACCTCCACAG ATGCTCAAAATAATATCTATGATAACATCAAACAAGAATACTTGGGCTCG ATGGAGAATGTGAAAACTGGACGCTATGCTTTACACACGGCGACCCTAGA ATGGATCCAAGAAAAAACTGGATTCAGCGAAATGCGAATTAAATGTCACA AGCCGTCTTTGGGATTTCATGTTGACGTCCTTCTAAATTATGCCTCTGAA ATTTTCGGCAACAGTCCTTCAAAGAACGTGCACTCTCCAGCAGACTTTCG ACCTCTTCCAGATGATACCAGATATAGTCAAGTGTCTGGTCAATGGGTCA AAGGTACAATTTGGTACACACATATATTATATGTTGGAGCTAAATATCAC ATCATCATTGATAGAACAGACCGATGGGAATGTGGAGATTATGTGGGTGT ACAACCATCAGGTGTTACATATTCTCCTATTGGAAATTGGCAATTCTTTT TTCGATAAATTGATAATTCAAGAAATGCGCCCCCATAATGTCTTTAATAT TGATGTCACTTTTAAAAAAGCTAGATTTTGGTTGGGAGTTATAATTTCGT GGGTTTTATCATCAAAAGCAGAGTAGCATCAAAACGTACCTACGCCTGAT GAAATCTGTAGGCGTGAAATTGCTGAAACTCGAGCCATAAAGATTCATGG TCCGAGGGGATAAGGTTTAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007158TCONS_00007158Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:416850..422521 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.12 0.03 0.13 1.17 1.24 1.26 1.29 0.73 0.9 0.79 0.93 8.19 8.63 5.18 3.89 1.68 2.5 15.75 11.34 4.53 5.06 1.71 3.79 3.2 5.03 0.94 1 0.66 0.54