XLOC_004020 (gene) - C. hemisphaerica

Overview
NameXLOC_004020
Unique NameXLOC_004020
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000074:30861..38939-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004020 ID=XLOC_004020|Name=XLOC_004020|organism=Clytia hemisphaerica|type=gene|length=8079bp|location=Sequence derived from alignment at sc0000074:30861..38939- (Clytia hemisphaerica)
TATTAAGGTTGTGTGTACAGAGTGGAGTGGAGTTAAGAAATTAGAAGGGA GAAAACTGACTGCACTAGAACAATTTTTTTGCGAAAAGAAACATTTCTAC AAAACATTTAACATTGCATTTATTGGCTCCTGTATTTGTCGCTGCTACTT TTAAATCTGATTTAAATCAAAATTCGAATCAGACATCAAACAAGTTTGAA GCAACCTTCGCAATCATATTATGGTAAGAACTTTTTTTTCACGATCTTGA CATCTATAACGTTGTTTTGAGACATGCCAATAATGCAAATCTTAAACCAT TCTCGTTCTTTTGAGTTTTGACAGTTTAGTTCATTTTACACTTGGTGGTT TTTGGCAACGGGAGGAAATTATGAGCTAGTTTTTGTCAGGTTTTTAAATG TTATCGAGTAACGGCTCGCAAAGTAAATGGGTAGGAAGATTTCGTTTTTT GAAATTTTTTACGATGGTGAAATCTCAGGGTGCAGGTTTTTTATAAGAAC AAAAAACTATATAAAATCATTAGACTTCGAAGCACAAATTATTCAGAACA AGTTTTAGAGCTTCTTTGTAAAATACCTCCACCAATGGTGAAATTGGGAA CATTTTAAAAACAATTTTAGATCATTAGTTAAGAACATCTTGAAGGCTTC AACAACTTTGAATGTACTTTTAAAAATGTGTCTTTTTCTTACATTGGACG ATATTTCTTAGTGGGGCGTGGATCCTAACGTGCGTGTTTTCGTTAAGCTC TAGGACGGTAATACATTTCCGGGTGGGTGTTGATAGTCTACTAGTAAAAA AAATTATGATAAAAATAGTCGCCCAAATTTAATGCTGAGAGTTTGATCAC GTTAAATAGTGCATTACAATCAAGGCCATAATATTTGAGAAAAAAGGGAG AAATTCCCCAGGAAGTTTTGAAAACACAATCAATTTTTAAGTAATTAAAG TAGGTTCGAAGAGTAGAGTTTTAACGCTAGACTTAGGAATAGTCCAATAA GGCTCAGAAATAGTCTTGAAGTCTGCCAACCCATCCCAAATGGAAATATT CGATTGGATTAAAGAGTCCAAAATTGACTTTCTCGCCGGAACTTTAAATC TTGAAAAACGTTAAAATAACCCAAATTCTCAATATTACAAACCATGATTG TAGTTATTTCTTTTGAAGAGAACATTTTCCGAGAAGATTTTTATCACCGC ATTTTCTGGTATATTATTTTGGATTGGTGTTCAAAATGATTGCTTGATTG ATAGTTTACATAAATTATGAATAGAATTTACGGTAAAGAATATTCGCCGG CTAAAAGTAACGGAATTCAAGGCAAATGCTGACATTTTTACTGAAAATTA TTATTGCAGTTGTATAGCATCTGATCGCTCTCAATAGAACTTTTTTTTCT CCACAATAGAGTTCATCAGATGATTTGTACAGTGATCTTGTCAACGGTGA TCTATGTCATCGGTTGAGTCGCTTGTTGGATCCTCTTGCTGGCCAAAAAG ACAACAGTAAGTTCTGATTCCTTTATTGAAAAATATGTAGTCTTTTTAAT AACCCTGTCTCACTGATCTATTGAGAATCGTTTAGAAAGTTGGGTCAAAT AACTACTCATTCATTAAGAATGAGAGTTCAACAGCGGGTTCAATCAAAAA CAATTTTTGGGGTATTGTTCAGGCATCTCTTTCCAAAAGTAGGATGAATT TTAATGTATACGTTCCAACAACTTCGTACGAGAAGCAAAATATAAGAAAC CTTTATAATCTTATCAAGGTTGAAATAGAAACGACCCCTGTATCATTGGG TTACCAAATATATTCTTACAACTTACAACCCTTTCACATCAAATCTAAGG ACCAGTAGTTAAGCTATTGATATTAAATAATGTTTCAAGGAAAACCAAGT CATTTATTTCACTGGTTTTCATTTCTAATATTCACACTTCTTCGTTGTAG AATCACCACCTTATCCTCAATATCGTCGAGGTTCTAGTTCCAGTCCACCA GAGTATCAACCGCAACCAAGCAACGTTGCAGTACATGATGTTTTCAGCTC CAAGACAACTCCACTAAAACGTGACATGTCCCCACTTTTGAAAACCGTAC CACATCAAAAAGCTGACATCTCTCCACCGCCCCACTCACGCCTACTTTCT AACTCTTTCTCAAACCGCTCACCGCCTCAAGATCACTCACCACCGCCCTT CTCCAACAACAGCAGTCTAAACTCATCAAGCCTCAATTCTTCAGGGAACA CATCTAGCCTCAATTCAAGCTTCAATTCTAGCCTTAATTCAAGTCATAAC AGTAGTGGCGCCAGTAGTCAGGGCGCTGTTGACCGCCGCCCACCCCCGAG CATCATTCAACATAACCATAACAACGTTAACATAGAAACATTACCTTATG GCACGCCACAGCAGCACAATTCCTACTCTTCCATCTACCAATCACCTCCT CTCTCCAGACCAGCAAGTCCCAAACGCAACTTGGAATTCGAGAANAACAA CAGCACAATTCCTACTCTTCCATCTACCAATCACCTCCTCTCTCCAGACC GGCAAGTCCCAAACGCAACTTGGAATTCGAGAATCTGTCAATGGCTCAAC TTTCATCTCTGGCTCCGGTAAGAAAATCTATCTTAGTTTTTTCACGAGTT CCTTGGTTGGGCTTCTTGAAAAAGACTTTGTAAGTAAAAAGTTGCACTTC GTATAATGGGGTTTTAGAGGTTACCAAATCTACTTTTCTGACATTTTCAA GCGGAAGCCTTAAGTAAAATAAGGAACAAGTGGATAGGTCCTCCTGTATT CTAATTGCCAAGTGACAGGCATTTTGATTGTTCTTTTTCACGAACAAAAC AATTTCTGAAAGCTTTCAAAACAGGGATAACGCTAGTCCTGTAGTTATTT TTTTTAAACTTGACATCTTAAAAACTCCTAACCAAATTCCATCTTTTTCT TTCAATAGTATGGATGTTACAATGCACCGACTCCTCTTTCTTATCCTCAT CAATTTGCACCTTCTCCATTGACCCCAACACCACCGGCCACACCCGATTG CGGCCTCTTGTCGCCGATCTCTTCTAACAATGAAATGGACATGGCACGAC GAAGTCTTCATTTGTCACCTTTGACTGGCCCCATTTCGCCGACTGGTCCA CCACCAGGATACACACCAGCTGATTATGGTGAGATTCCAATTGCAAGCAT TTTATTACATAACTTGTATTAAAATGATATTCCAATATCTTGTATCGAAC TCCTATATCGATAGAACTGTACACTTTGTAAAGGTAGGCTACTTTGACGG TTAGCTGAATTAATGGAATACAAAATACCTTGTCTTTTAGATTTTTCAAA AGTGTATGAAGCGTTCAAATGACAGTTGCTAATTTCTTAATGCGTTTATA GATCTATATTATCTTTTGACCTTCCTTCGATATTCCAAAGGTATGGACAA TGTGTTGATGGATCCTCGTTGGGCAACAATGAATCAATATTTGGGTGATT CTAGAGAAATCATGGAATTGGAGAGAAGAGCCCAAATGCAGATCAGTAAG TCAACCCTTCTTTTTCATACTTCTAAGTCTTACATTGTTATTGGTGACAA ACGAGCTACTTTTGTTGAATTAGCTCTTTCTTTGCATCCATGTGATCCTA AAATCTTTTCGTGTGGAGACATCCTTATAGTACTTATAGCATGCAATGAA CACTATTCGAAACAGGGATGTATAAGTGAGTGAGAGAAATGAATCAATTT CAACTTTTCTTGTCTCATAGCATCGAATGATCCAACGTACACGTGGAGCG GTCAATTACCAGCACGAAATTACAAGAATCCAATCTATTCCAATAAGATC TTCTTGGGTGGTGTTCCATGGGACATCACTGAAGGTAAAATATTATTACA GGACGTCTATCTAACGTCCACCTAGTACGTCCGTCCACGTCCTTTTAGTG TCCATTATATTCTAAAATGTTAGATGAACACTAAAACAACGCTGTGAGAT CGAATTGATTGAGGGTTCGGTTTTTTCTCGAACCCAATCTGCATTTCTTC GAAAATCGTATCTTCGTTGGAACTACACGGTTATGAAGCCATCTCGTGTT AGTGACTTTAGGTTTCTCTCCGCATGACATATCTCATTCTTCGATTACTT TTTCTATTATCTTAACTTTCGTGATAATACTTGATTTCAAACGATGTATT TATTTTTCAGCTGGTCTTCAGCAAGCATTTCGTCCTTTCGGTCCCGTCAA AGTTGAATGGCCAATCAAAGAAGTCAAATCGGATAGAAACACACCCAAAG GAAGAGGTAAGCCTGATTGGCAGCATCGATTTGAATCACTGATAATTTGA AATGATTATATATAGTACCCCCTGTCTCAAGTTAATACTTACTATGAAAG TACTAAGCAAGTGGCTTAAAGTACTACCGACTTTGGCCTTCTTGAGAAAT CTCGTCATATTTCACAGGATTCAACTAAGTTTACAAGTCATCGTGGAAAC TGTTTCAGATTTCTTTCCTCTCTTTACAGCTACTCTTCGGGAGTATCCAT CACGCTTAGAACAGCATTTTTAGGATCTCTTCAGTAGTACTTGTCTTTAC TCGTTAGGAGAGCTATTCTTTGAAACTCATACTGCACGAAAAGTTTATTT TAGTTGTCAAATTCCATTGCGTTCATTTAGATTCCCTTTTTCTATTCTCT TCAGGTTATTGTTACTTGCTTTTCGAGAATGAGAAATCGGTCAAAGCATT GTTGGCAAATTGCACTCATGATTTTTCATCGGGCGGTGATTGGTACTTCA AAATCTCAAGTCGTCGAATGAGATGCAAGGAGGTAACATCCATCTCATAA TTCTTATATTCAAAAAAGCTGAAATTGCAATATTTGATTCACACCCTAGC AAAAGCTGCAGTCTTTTTTAGCCCAATAGAGACTTTTTATTTTTCGTAAA CTTTCTTTTTTCAAAAAGAATCAAACTAGTGTTTTAACTAGTATGGACTG GTCCAGCTGCTGCCTTATCGAAGGTCACTTCACTTTGGAATCATTTTGAA ATTTTCCTTCGTTTCCCAACCTTAGGTACAAGTCATTCCATGGGTATTGA CAGACAGCAATTTCGTTCGTATCTCGTCACAAAAGCTGGACCCAAACAGA ACCATATTTGTTGGTGGTCTTCACGGAATGATGAACGCAGGTAAGCAGTA TCCCTAAAAATGGCAACCCTGTTTCACATGAAAGTGTTTTCTCCTATAGG CACAACACTTAATTGCAACATCTGAAACGTTAAATTAATGTCCAAAGAAA GCTGTCTTAAGCTGAGAAGAGTTGAGTGAAATACCCGTCGTGTTCTGTGA AAGCTCTCTCACAACGTAATTGTTGGGTTTTTCTAGTGACTATAATGAAA CTTATAGTAATCTTAAAATTTGGAACAGTCAATACAATATCAACCTTTTT CCTAATGTTTCTTTTACTAGTATCAGAGTGTTTTTGCCTGTTTGACATTA TTTAAAATTGACTTTCTTAGAATCATTGTGTCAAATAATGAATGATCTAT TCGACAATGTCATCTACGCTGGTATCGATACTGACAAACACAAATACCCC ATTGGTAAGTTTCCATCACGCAATAACGTCAAAAAGACGTTCATTTAAAC GTCAATTTGATGTCCAGAGCGTGTTATACTATCAAAGAAAAAATAATGTT TTAGTCACACCATATCTCTAAAGGTCCTAAAAATTATTCCTTATTTGTTC GGTTCAATTGGTCTTTGCTTGGCAATGACAAAATTTCTTTCATAATTGTT TATAAAATATTGGAAAATTTTCCTCTGGGCGTTGCTTTCCCCATAGCTAA AGATGGGGCTGTTTTCAAAGGGTTTTGATAAAGCTGCTGTAAGTCCAGCG AATCGCTGCGAATTTATGCTAGTAATTTCTCTTCTTCTTCTATCCAAGGT TCTGGTCGTGTCACTTTCAGCAGCCACCGAAGTTTTATGAAAGCTGTTCA AGCCGCCTTCATTGAGATTCGAACCACCAAGTTCACCAAAAAGGTAGAGT GCGCCAAATCGAATTATTATCTGGCTAGAATCAATTTTCACACTTATCAT AAGACCATTATCCTTATAACATTTAGATCGCAGAGGTTCCTTTTCCTCTT TCCCTATATACTATCACTTTAGAGAAATTCGAATGAAAAACCTGAAAGCG CCCCATGGTTTTTATTCTGCTTAGATCGCTGAAACAGGATGTATAATAAA GATGAATCAGAAAGATTTCACAGATTGAAAATCCTTTACTTGTAGCCATA AGCCCCGAATTGTGATCGAGCCTTATTTTCGAAGAATTAAATTTTCGGCC ATACTTTTCACCTAAAACGGATTAAAAAGAGGCTTTTTGCACTGAAGTAT CGTGTCTTCCTAGGTAAATTAGTAACTTGATATATAGACCTTGAACATAG ATTCCAACGTAGATATTTAAGTATTTAGACTTGAAATATTATGTGCTAAC TCAATCTATGAATCTCTCTTTTTCCTGCAGGTGCAAATCGACCCATACCT TGAAGACTCGATGTGTAGCACGTGTCACATCAACCCAGGCCCCTTTTTTT GTCGTGATCCAATCTGTTTCAAATATTTCTGTCATTCATGTTGGAATTGG CATCACTCGTTAGATCAATTGAGAGTTCACAAACCAATGACCAGGCATAG CAAAACTGGAGGAAGTAAGGATTAAACGATGTTTTAACGTTCATTTAACG TTCTTTTTAAACTTAAGATGAACCCGGGGATGAACCTTGAAGCAATGTGT GATCAGTGAAATTTCAACTTTTGGTCCTTAAAGAGGCTCCTGAGTTCAAA ACCATTAAGTGAAAAAAAATTTCTATGTAACTAAGAATATCCCTGATAAA AATAGCCCCTCGACGTTTTTTCAAAGCCAATTTTGATTACTTTCTATAGC TAGACTATTTGAAAAAATCAATCAAAACTGTTTTTTTATGAACGAACCTT GCTTTCCCATTCTCTTGGTATCTTGAAATTCACTACCTTTTCTTTATAGT GCAATCGACATGGTCAAATTATCCTGGAGAGATCTCAATCCTTTACATGG GCCGTAACTGAAGCAGCCTTCAAAAGACACAACATGAATTTCACGAAACG GATAAAAGATAAGATGACTCCAGTTATTTAGTTGCTTTCAGTTAATAGTT ATTTAGATTTAGCGTTTTTTAACATTTTGGTTCAGTCGAAAGAAAAATTA TAAAATATATTTTTTAAAAACATGAGAAAATTTTATAAACCAAAAATATT TTGAAAAGATTTATTTACAGTTTGAGAATTTTCTTTAAATCTTAATTTTT AGATTTTCAACGATTTAGAATTTCAAGAATTTCAATTTTTCAAATAACAT CTTTTCTGTACTAGGCAATTGACACAAAGTTAGTTTTCTTCTTTCAGAAG TCAAACAAGTTTTCCAAAGAGATTTATAGGCTCGATTGACTTCGCAGTAT CTTCAACGATGTAGAAAACGTATTTTTCAAACTTCAAAAATCTGAAAGTC AGAAAGGAAACTTGTGAAAATTTCAATTTTGACCTTTTTTCTTCTGTTAT TTTACACTATATTATATGTTGGTTTATTTTATTTTCATGATTTATTTTAA TTCTCATATTATTAGATTCGAAGGTCCAAGGTTGAATTCTAAACCAATTT TTGGGAGAATTTTCCGACAGGCCTCAACCTCTTATATATTATCCGAAGAA ACCTTTTAAAAAACAAACAACTTATTTTTATCATAAACTATTTTTCAACC ATTTTTAAAAACCCCAAAAATATATTTTAATTTTTGTAACTTTTTTATAT ACTTAGGTTAGATTCCCAGAGTTAAAGCTTTAGTGCCAGACATTAGAGCA GTTTTTAAACATTTATATCAAACAATTTTTTCTATATCTTAGTTTTACAT TTTTTATAAGCTCAATTTAGTAGAAGTAGTCTAACACGTTTACATTTTTT GAGTAGTTAGCTTCTTTAAATTATCGTGTTTCAGGCAAATGAAAATACCA AAAAAATTGATTATAACTTTTAAATGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007165TCONS_00007165Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007165-proteinTCONS_00007165-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:30861..38939 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
256.02 292.63 80.45 69.5 0.36 0.24 0.15 0.14 0.07 0.29 0 0.03 0 0 0 0.01 0.04 0.07 0.01 0.07 0.64 0.7 131.25 137.19 0.04 0.17 8.1 8.49 96.65 102.78