XLOC_004029 (gene) - C. hemisphaerica

Overview
NameXLOC_004029
Unique NameXLOC_004029
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000074:160230..167374-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004029 ID=XLOC_004029|Name=XLOC_004029|organism=Clytia hemisphaerica|type=gene|length=7145bp|location=Sequence derived from alignment at sc0000074:160230..167374- (Clytia hemisphaerica)
TAAGGTTGCCAAACAATCAGTTTATCAAATCTTTAGGCTGATAAACAAAA ATTACCAGAAGAAAAGTAAACGAAATACTTATATACTGAAAGTATTTTAA GTATCAATCGACTTTAACGTATTTATTTTGATATTATAAACGTTACGGGA ATTCTTTGATTCAGTGACACAGTCAGATGCGGCCACCATTTAATTGGGAT AGTTTAGGTCAAACTACAACCCACTCCACTTTTTCACTATTCTGATAGCA GTCATCACGATAGGTATCACATCCTTCAGTAAAACCAGAAAATGGTCCAA GTGGATTTGCGTACGAGATTGAGTCTAGTCAAAAATCCTCTCACAGTTGT CCCTAGATATACAGCATTTTTCCATCAGCTCATTTTTAAACTTGCAATTC CAGTAGGGGAAACCATGCTCTGTTTGTTTATACGTTTAAAATAAAAAGCT AGAAATGACGTATGTAGGGTAGGAATCTTTTGGAAAGGATCAATCTTCAC TCGTACATATGGGTTCATACGGCTTTAACCACAAACAAATAAAGAATTTT AGCGCTAATAAGAATTTGAGACGCGGAGGAAGTTATTGTTAACGTTAACG AATGCCATCAAAATTGGTGCTTCCCTACAGCGGTTTTTTGTAATTGTCGG TAAATAAGACGTGAAAATGCAGATGAAAAAACGCGTGGTTAAATGGTTTC AAAAAGCAAATAATGTACCCCATCTCATCATCACATTAAATCACAAATGC TTGTAGACTGGCCACATATAAAAAATCATAAGTGATTCCACTATACATAA TAGCGAGTGGTGGATAATCAAATGGTTGAAATCTAAGATACTGTAGGGTT TTTCAACAAAATGGTCGATGGCAGAATTGGTGATCGTTGGCTCCAATCAT TTTTTCATTTTTGCTGAAAAAGAACAAGCCTGAGATGAACAAGTCGTCGC GCGGCATCAACTATGACTTAGGTAAGTTTTTCCATTTTCTAATTTCACCC AAAAGCATGTTCTCCATTCTTTTTTATCATATTTCATTACTTACAGTAAT ATATTTCCCAGGTCTATCGACCTTTATGAAATAATCATACTTAACATTTT ACAATTTATGGAGATCTTTTTCCCATTCTGTGAGCAATTTTAATGCCCCC CAGCGGTTTGCATGATTGAATATTCATATAAAGTACATTCTTATAAAAGA GACCGTGTACTAAACGAGAATTTTCTTTCTGTAAAGTTCTTATAAAAATT ATGAGAATTGAGACTATTTTCGTTTGACCACGAAAATGCAATTATTCTAA TCACAACTTTTGGCAATAAATCGATTATGAGAACGCGTAACCTTGACTTT TTTCATAAAGAGGTTGACATAAATTAAGAAATTTAAGACTTTAGAGGGTA GAAAAGTGCAGAAACAGGACTTGTAGACCCTAGGCCCGAGGCCCAATAAA GGCACCGTTAGAGTGGGCGCACCGAGCTTACACCCTCTTTTTCCAGGTAA CTCCCGCTTCATCCCTTGTATGTGTTTCTTACAATAAAATTAGTTCCTAT GAAAAACTTTTGAATACCACATTTAGAAGTCGTTACCATTTCTCTTTGTG TGCTTTCTCTTATCAAACATCTACATAAATGCAATTAAATAATTCGAAAA AAAATATTTATCCATAATGGTAGATAAAGTAGTGAGGTTCTCTTAAAATA CGCGTGTACTAATAAAGGTACAAGCTCCCTTGAGGGAAGTCTTATATTGT GAAAAGGAAAAGCAGTTCTTTTATTATGATTTAAAAAATCTTTGATTTGG AGCTTTTGTTATTTAGGATAGATGTGCTATGCTATTACTAAGAAAACGTT AAAATTTAAAATTGAAAATATTATTTGTATTTATCATTTTTTTCAAAACA TGTGAATTTTTGAGAAGTGAAGAGCAAAGAGGAAGGATTTCAACGTGAAG AAGAAATTTGTGTAGTGAATCCGGTATAAGTAATGTTATAGAAACGGGAG ATTTGTTCTGAGGGAGTGTTTTGAATTTGTAAGCTACGATAAAAATGCGT TCGATCGAGTTAGATACGAAGAGCCTCGAGTTATAGAATGATGACCCGAA ATCAAGTGAGCTGGCACCAACACCAAACCATAGTCAATTGGAGAGTTGTA TAGCATCAGGTTCAAAATTTGTGATGATATATTTTACAGCCATTCCATTT GTATGGTGATTCGGAGGATAAGTATAGAGTCAAAGAGATAAAACAGCCCT ATCTCGACTCGAGGCACAGTCCTGTCTCACACCCCAGCGAATCTTTTTTC TCGCAGTGCGGATGAAAGGAGGTTGATAGCTTCGAAGTTTTTTTATTCCT AGCTAAAAAAATCCAGTGGGAATGGCTTAATTCTTCCCGTCAGGAACACA ACTTTGTCCGAATTTTCCGGTGGGGCAGGGATTCTCCCGAGTCTATGACA AAAGGGTATCGAGACGCATTGAAAAGTTTTGGTCAGATGTTCCTATGGTT AAGGAGTTTCACCCGGTCTACGATACAGGGGTATATTATAGTTAGAGTTG ATAAGGAAATTCATTCAACACAGCAAATGATAACAGAGACTTGATAAGTG ACAGATAGAATCTTTTTAATGATATAATTCTTTGATATCAGAATTTGCAG CTTGTAACTATTAGATTAGATTAGATAATAAGATTCTACCGGATAGTAAG ACAGTGATGTTAGTAAGTTTTAATGAAAATTGTGATGTTTTTGTGCCAAT AGACTAATGTATGATATAATATGTAATGGTTGTAATGTAGGTTTAATATT AGCTTGCTAAATTAGTAGATGACTGTTATAGATCATTGAAATGATTGCCA CGGTTAGAGCAAATCCAAGTTAGTTATTACCAGGGCCAAATGTAGCTAAA AGTTTTTAAAATTCAAAGCCAGGGAGCAGTGGGCTTACCAAATGACCCCT ACAGTGCAGAAAAATGTCGGTGAAATTCATACCCTTACAGTGCATTTTTC TCAAATTATCAAACAAATAAAAATTTTCGGGCAACAATGCGTAATTTTTC CTAGACTTGTAATTATTTCTCAGTCAATTTGACTGACTGCCATCTTCTTC CCGAGAATTCATAGTAAAGAGGGTCGACTTCCATAAACATAAGTGATAAT ATCGAGTCCCTTTAGAATCTCCCTGGTTAATAATTTTATAATTTTACCAA AATTAATTCAAAATGTTCATATATTTCTCGTCTAGAGACGTCACTAACCT ACGATGTATCCAGGAAAATATTTACTGATAAGCTTAGTATTGACCCTGGA GTCTGTCCTGGTCATGGCGAAAAGTTTGACGATGCAGTTGAATGGATATG ATGACGATTGTGTTTACTTATCTAAAGAGAAAGACGAAAAGCTTGATTAT ATGGTAAGTTTACCTAAAGGTCAGTAGCGTGGTGGGTCAAGGCAAACTGG GGAGGCAATTTTAGAAGATTTGGGTTTTGGCGCCCCCTATGAAAAGTAAA TATTTTTTAAAGAATAACGCGAGCGAAGCGAGCACGAAAATCTTTGGGTA TTTTCTTCTTTTTGGCTGAAAACTGCCATATTTAAGGTGTAAAAGGGACG CCGAAATTATAGGCTAGCGAAAAAAGTTTCTGCGATTCAGACTACCGAAA TTAGTAATTTAAAGCGTCCTTTTTGCACCCTTTATAATTCGGCGCCCCTT TGAAAAACCACCCTGCACCCTGCCACCACGCTACTGCCAAAGGTTTCTTA TTTTGATAGAACTTTGGAGATTTTGAAATTTTCCATAATAACAGGTGTTT TACAAAAGTATGATAGGTAGGATTCTGGACTCTCTTTTCATTGGAAGAAT AAAGTGAGAAATGTTCCCTTTGAAAGAAATACCCGACTGAGATTTTGGAT GTTCTTAAATGAAAAAACAACTTGTATCGACATTTATATTCTTCATCTTG CTTCCTTCTCACTTGGTCACTAAGGGTGTATAATACAAAAAGGATTGGGC TGAAAAATTATAATTTCGGATATTAAGAACGTCAAAAGCCTTTGGACGTT TTAATTTTTTAAGCTTCTAAGGATTCTATTGTTTAAACAGTTTATAAGTA GCTGACTCCCTAACAAACTCATTCACAGTTTAAAGTCTTCAAAGCTTTAA AATCTCTTAGAATGTTTTAAAAATTATTCTAGCTTCGGAGTCTTATGTTA TAAGAAACTTTGTTTTGAGAAACCTGTTCTTGAATTTCAGTTGATATCAG GAGGTGCGAAAGTGGATTTTACCATGTTCGAACCGAACGAAAACAGTCCA AATGTACAACGACATGAAGTTACCGAGCATGAACAAATTGGATTGCTGCT TAATAAGACAGGTAGATGCTCTTTTTATTACCAGTTTGATCTCAAATTGT TCTCATCTTGTTCTTATCTTAAAGGCAAAATTGAGATATTAAAAGCGCAT TTTCGTTTTACTGTCTAAATCTTAACTTGCTTGAAATTCAACCATTCCAG GCTCAAATGTTTTCTTAAATTATTCTTATTTTTCGGTATAAAATTGTTCT TATAAAATAAAAAAGGCGATTAAAAATCTGAAGTGGATGGAAGGTAATGG CAATTATCATTTGTCTGAAATTTAAACGGTGAATCTTTGTTTGATGGTTT TTGCAACTATAGCACCTCATACCCAAATGTAGCCTGTACCAGACTCTTCG TCGCTGACTGAAAATATAACCTACGGCAAGTTTTTTTCAAAATATAGAAA ACGCCCGTGGCGGCAGGGTGATAAGGCTAACCCAAATGAAGTTTTCTTAG ACTTTTCTTAAATTTCAGGCGATTACAAATTCTGTTTCGCTAACGCCTAC CAGAGTCACCCCATCAATGTGCTGTTTGAGTATGATATGTTTGAAGATAT AGAAGCTGCACCCAATGGAAACATGCAGAAAGAGAAAGACATTTTCGTAA AGAAGGCAAAAGACGCCGTTAGAGAAATGTTCGACCAGCAAGGTACTGTA AAACCCTAATCTAGCAACACTGATCTTTCGTTATGCAAGGGCTACAAAAT CAGTATTTAAAAAAAACTCAAACCCACTCTCCTAGTTCGNTATCTAGCAA CACTGATCTTTTGTTATGCAAGGGCTATAAAATCAATTCTTAAATTAAAC TCAAACCCACTCTCCTAGTTCGCTTTTAAGATTCTCAAAGCGTTCACAAT TTTGTATTGCCCATCAGTAAAATAAAAAAAAGTGATGTATATGGCTCTGG GGTCTATTACGAAATAGGCTTTTATGTCAGACGGGCAAATCGATGACTTT GGACCCCTGTGAAAATTGACTCTGTTGATTCTAAAACATATAAAGCAGGG AAAAGTTTCGCCATAAGCTATATTTTAAGAAAATTGATAAGTGACTGGAA GTTCTGGAACTGAAATTTTTATTTTGCTCCAACTATTTTTTGTGTCGGAC NCTTAGGGGATATGCAAAGAGCAAGAAAAAAAATGGTTTCATATACAAAT TGAAATTTCGTCGAGCAGTGAGACAGGACCGTCTCTAAATAAACTTGAAT TACTTTGATTGGATATAATTTAGCGGGGATTAAATTTCACGATTTTAGTG TCATCCAAGAAAATAAGTCCACGTGGAATATTTATCAGCCATCACCAGTG GGCTTTTCCAGAAATAGTCCGTGTTCCCCCTGTTGAGGAATATCCAGGAG GTTAACGATTTTTGTTCAAAAGTGGATATCCAGGAGGTTAAATATCGACA AGGGAGCGGATATCCAGGGGGTAAGCATCTTTATAAAAGAGGATATCTAG GGAGTTGAGCATATTTTTAAGAGTGGATATCCAGGGGGTTTTTACGAATA AAGCGGGATATCCAAGGGGTGCGATACTTTGAAAAATCAATATCCTCAAC AGTGGGGACAAATTTTTTTTCTGGAAAAGCCCATCTTGTTCGGTTCGCAA AACTTTTCATTTCATTCCATTGGCATAGGTTACCATTTGACAGACGATGC GCACAGACGTTCCTTCATGAAAGCAGTTGTAGAACATCAAAAAGAAGCGC TCTACCACGGTGAAGGGAAAGGCGCTGACGATCGACTGAAGGTAAATACA CGATCCTTTCTCGAAGTTTACTGGATATGTTTTACTTTTCCAGTGCGCAC AGTTTTTTGAAAAATATGAACACTTTTTGAAAAATATGAACATTTTCAAA ATTTTTGAAATCCAATAAAATCCAATAAAACTAAAACTGACATAAAAGCA TGTAACCTGAAAGGTTTTTTTGTAATTGTGCATTGTAATTGTGCATCTTT CATTTTTNAAAAGCATGTAACCTGAAAGTTTTTTTTGTAATTGTGCATAG TCATTCATTTTTGTTCCATTTTCGAAGGCAAAAACTAAAATTGTACGTAT TTTAATTTCTGTCCTTTCAAGCAAAAAGAGGTCTGTATGTTTACCCCAAA AAACTATTTATTTTCTTAACAATCCAACTTAGGGTACAATTACAATGATT GGTATCTACATGGATGAAATGGAAAAATCATTGAGCAGACATGGAAAACG CATCGGGCGCCATCACTTCTTACAGATGATCAACCATGACCGAGTAATGC AATATTCTATCCTAATCTCCTTAGCTATGGTTGTCAGTACATGTGTCCAA TTGGTTGTGGTCAAAGGATTCTTTAATGGCAAAATGTCTTTGAATGTCTT TTCTTATAAATAGCAAATTTTATGATATATAGGTTTAAGCGTTTATAGGA GTGGCTTCTTTGATTAAAAAAAAGAATTTTCAAACCAACATTCGTACGCG TATACGAGTGGTAGCCACCGTGCATCATTGTTGGTGGACCTGTTTTAGTT TGCGATCTACGTTGAGGTCTTTATTGGTTTGGAATTGGGCATTTCAAGAG CCTGGACTTGAATTTTTGTAGCTTTTGTATAATATTTCTTATAGATTATC TTATAGGGGGTTACAAAGAAAATTTTTAAATTACAATAGTATCATAGAAT AAATTTAGGGAAGAAAGAGAAAAGATTATTAGAATATATGATTGACTTAA CTTATCTATAGTTCTCCTTTGTAACAAGCGAAGATGAAATCCTCGCAAGG GCGACTTTTCTGCGCGGTTGCTGGTCGAATGGAGTTGACTGTGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007184TCONS_00007184Clytia hemisphaericatranscript
TCONS_00007183TCONS_00007183Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007183-proteinTCONS_00007183-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:160230..167374 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.13 0.88 0.28 0.33 9.6 8.38 28.7 31.23 31.53 20.1 15.83 21.46 6.48 5.66 10.74 10.26 6.05 6.54 3.75 4.88 6.59 6.49 3.83 5.17 5.64 4.73 5.19 3.94 2.06 1.36