XLOC_004304 (gene) - C. hemisphaerica

Overview
NameXLOC_004304
Unique NameXLOC_004304
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:530030..540146-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004304 ID=XLOC_004304|Name=XLOC_004304|organism=Clytia hemisphaerica|type=gene|length=10117bp|location=Sequence derived from alignment at sc0000078:530030..540146- (Clytia hemisphaerica)
TTTAGTGATAAATATACAAAAAATCAGAACAGCAATATTTTATAAAACAT
GTTTGGTGAGAAAGCATTTGAATTGATCAAAGAATTGAAAAGATCTACTG
ATGGAAACCTACCAGCATTTAATGTAAGAATCATTATATTCAATGTATAC
GATAATCTCAAGCTTCAAAATGAGATAATCACTTTTTTAATCTTTGTTCA
AATCAGTCTTCATTGTGCAGATGTCAATTTTAAAATCATTTCATAACTGT
GCGAAAGGGGGTTAGGTTCCACTTTACTATGATTGACATAAAGTAGTTCA
ATTTATGGATTGGTACCATCATTGACGATACTGACGTCATCATTCAACCC
CAGTACACTTGAACCCAGCCTTCTTTTAGATCTAGGGCTGATATAGCTAA
GAATATTGGAACAGGTTTTCCTTTTGAACTACAGTTGACGCTCTCGCGCT
CTCTAACTCGGCGTTTTACTTTTTGGTACGCTCCATTATTCGATGGTATT
GAAAGTCACCATCAACAAGAAACTCTTATAAACGACACTAAACTATTCGA
TACACTCTATTTCGATAAAAAACAAATTCCTCTTGAAAATCGAATTAGAG
AGCGTCAACTGTATATAGGTTAATTCGAATATTTCTTTCTTTACCAGGAG
GACTTGGTACGTCAAGTGTTGGATGAAATGAGGGTTTTATTCGAAGAAAA
TCAAAAAGAAGTGTAAGTAATATACCTGGGTTGGTAGCTTTTTTTTTTCA
AAAGCTGAACCCACAGAACAGCTTGTTCAATATATACAATACAAGCAATG
ATGAGCTTGAATTGTACATTTTTGGTGCTCATAATAAAAAGCACAGAATT
TTGTTTTCGCATTGACAAGATGGCTAGTGGTCTAAGTTTTTGGAGGTTTT
TGCGTCTAGACGGATGGTCGTAATGACAGCTTGATATGTCCCGAAAATTC
ATTCCGACTGTGAAGCAGTCTTTTCTCACCCACTAGTTGATAGAAACACT
TAAAGTTTTTTTTTTTCAATTTCAGCACAGCGTCCGTGGAAGGAGAAGAA
GGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTTTGGAGCGAAACAA
AAGATGTCTGCTAGCATACATGTAAGGTCAAAATGTGTCTATACTGAGCA
AGAGGCCTTTATCTGGTTATTGAATCAAGTTTCGATATGCCTAAGGGTTT
GTTTATTTTAAACACTGGTAATCTTAGATTTGTCCAAATTTGTTGTTTTT
TTCCCAATACAGGGAAGCGTAAATGAGTCAATTACAGTCAACCTACTGAC
TCAAACCTGTACTGCTCGAATGGCTCCACACCNTTTTCTTTACCAGGAGG
ACTTGGTACGTCAAGTGTTGGATGAAATGAGGGTTTTATTCGAAGAAAAT
CAAAAAGAAGTGTAAGTAATATACCTGGGTTGGTAGCATTTTTTTTTTTT
CAAAAGCTGACCCCACAGAACAGCTTGTTCAATATATACAATACAAGCAA
TGATGAGCTTGAATTGTACATTTTTGGTGCTCATAATAAAAAGCACAGAA
TTTTGTTTTCGCATTGACAAGATGGCTAGTGGTCTAAGTTTTTGGAGGTT
TTTGCGTCTAGACGGATGGTCGTAATGACAGCTTGATATGTCCCGAAAAT
TCATTTCGACTGTGAAGCAGTCTTTTCTCACCCACTAGTTAATAGAAACA
CTTAAAGTTTTTTTTTCAATTTCAGCACAGCGTCCGTGGAAGGGGAAGAA
GGTTTATACTCAGGTGTTCAATTACGTCACGAAAGTTTGGAGCGAAACAA
AAGATGTCTGCTAGCATACATGTAAGGTCAAAATGTGTCTATACTAAGCA
AGAGGCCTTTATCTGGTTATTGAATCAAGTTTCGATATACCTAAGGGTTT
GTTTATTTTAAACACTGGTCATCTTAGATTTGTCCAAATTTGTTGTTTTT
TCCAATACAGGGAAGCGTAAATGAGTCAATTACAGTCAACCTACTGACTC
GAACCTGTACAGCTCGAATGTCTCCACACCTCAGTGGGCTTTTCTGTTTC
CCTGAGGTCTTCGTGTCATGACAATTCGATATGAAGATTCTTTTTTATAC
AATTTTCTCTGCGTTTTTCACCACCAGATACAACCGAATGATGAGGATAA
AACAATACCGTTGGGATATTGGGAGTGTCCTCCCACAAGACGTCAAACTG
AATCTCGTCGAACAAGAGGTATAGGGATATAGGCAATACTCATGGGGAAC
GCTAATTCGTCCTATTGCTGCTATTGCTGAGAATTTGATTGAGTAGATAT
TTATTATTCATGTAACCTCTCCCTTCTCCACAGGCTCAAAGCTTGATCCA
CCCCTTTTAGGAAAGTTCTTAATACATCAACTCCTTTCGCCAAAAAGAAA
TTCAGGGTTTGAGCTTGTGCCTGTACTATGGAGCGATCAATGAATTCACT
CAATTCATTAAGTGTCGCTAGCGTCATATGAAATCGTTCACTTTTTTTGG
TTCTGTACCGGTGGGTTTAGACCTAAGAGCACTGTCTTCCATGCCTCCAT
GTTTTTTACCTCGCCCGTTTTTTACCCGGCCTGAATAAAAATTTAGAATT
TACATTTTTTACTTGGTTTGGGTGTATTTAATCTGAAGTGGCATTTAATT
GGTCAATGATGCAAAAGAAAGGAATAGCAGTTTCTTAATTGAAGGATAGG
TTTAAAAAGACCATAAAACTCAAACCATCCTCTGCAGTACATGCAAAATA
TTTTATATCTTGGATTTCGTTTTTTCTTTTTCCAGGTGAAATGGTTTACA
GAGTACAACAAATCGCTAGCAAAATATATGATGTCGACTGCTGGTGGTCA
TGGTATCGACTTAACACAGGTGTGTATCTACAAGTTTACCTCTACCGCTT
GACAGATTTGGGGTTAAATATATGTCAAATGTCTGAATAGCAGACCTCTA
TAGATGTATTAACTGTAAAAGAAACTCTTTTTGCTGTGAAAAGAAGCCTA
GGAATTAAATTTCTCAAATATATCAACTGATTGACTAGTCTGATTTGCAG
ACCATTAGATATGCTTCCTATAAGACATTTTTTTCGTTAGAAGATACGCA
GAAGCATACTTCGGGATTGATAGAGAACGATGGTCAGTTTTAAGTGCAGT
GTTTTTTACATTAAGGTTCACAATTTGACGATGAGGTTTTTTTCTTTCTG
TTTCAGAATATGACTCCACCAAAATCACTTTACATTGAGGTACGATCTTT
TGTTTCTATTTTTTTTGTTTCTTCTTTTCCCCTCCATGTAAAAAAAAATT
TCCAACGACACATTAACGCTGATAATTTGATTTTAATATCTGGGGATTTT
AAGGAATTTTTTACCAGACCGCGTCACGGATTTTGAAGCGGGAGACTTGA
ACCCTAGCCCTCGTTTTCAGGGATTTCGGGCAAATCTGAAATATTTTCAG
GCTTAAGCGTCTTGGAATGCAGGACATAAAAGTTCGGCTATCATTCCCCT
CCGATGGGAAATCGACACGCTTTAGTGTGGTGGCCACTATTCCATCGATC
CGCCATCGTAATATCAGATAAGGACGGTCGCGGATCCACCATTGAGATAA
CCTCCTAACTAGCACAGAACGCCAGCTTTGTTTCAACGTTCATATATAAC
GCCATTTGGGAGTTTGGGGTGTCAGAAGCAGCCGGCGGAGAGATTTTTTA
GAAAATATGTGTTTTTATCTTCTAGGACACCACATTTTATGACCTCCAAT
TTTCTTTTACAAATGATGTGTTCTAAAATCTAGAAAAAACATTTTGCCAA
GATATACTTTAAGATATTTGTTTTTTTCCACGAACCAAAGATGTGTTCTG
AAACCTTAGGGTTAATAGGCAACAAGATCACATCAATTTTCTCTTGATTA
TACCCCTGTCTTTTTAAAGGTTGTGTTCTGAAGCTTTCTAGGGTTACCTA
GACAACAAGAACAATTTTGATGACCTTGATTATACCCCTGTCTCGTCAGA
ACACATCATTATTTCTAGCTGAAACATACTCTCAGAACACATCGGAAAAA
AAGGTCGCTTCGCCGGCTGCTTTCGGGGTTTGTCCCATAAGCTAGAAAGG
GCTCGAATCAATTTAAAAGGCTAAGGGTAATTGTCCTAGAGGGTAATCGT
CCGGGTGCATTTCAGGAGCAAAGATCCCTAGTGACAATTTTCTGAGGGAG
GGGGCAATCCATTGAGTCTAAAACCCGAAGGGCTAGATTTCAAAATATGC
AGCCCTCTAAAACAAAGGAACCGCTAGATACAACCTGTCCTCGTGATCGC
GGCGCGTTCTAGGCTTGTTCTGTATGTGAAGTAAGTGTCTTCACTTTTTC
TTGCCTGGGAAGGGTTAGAGATTCTACTCTAGCCCTTCGGGTTTTAAACT
CAATGCTACAAACCCCCCCATTTAGGTTCTCTATGAAAAAGTAAAATGGT
ATCTACAACCTCGTGTACAATATTCTTCATGCATCACGTTTAACACATCG
TTGTACAGCAGATACCCCCCTGCTTGACCTCGTTATTTTATGGTCAATTT
TTCTCATTTTGAATATTATGCGAAATTTTCGACTTCCGAGTCGTCTTGTT
AATTTCGCCTAGCGAAAGTATTACAATCAGCTTTCGTGGGTCGTCGCGGG
TCGGAAAAAAAATTAGAAAACGAAAGTACTTGATACGGTGGACTAAAATT
AATTTACAAATTACACGCTCGTATAACCACGGACGATTTTCGTAGGTTTT
CTTTGGATTACGTCATATATCTTTGTGTCTTTAGCTTCACAGTNNNNNNN
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NNNNNNNNNNNNNNNTGATAGACGGTGATATACCTTTTGGATAGACGGTG
ACATACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGACGGCGCTC
AATATGAGCATGTTCATTTTTCCTATAAACATTTACTTTATAAGAATCAA
ATCAATAACTCTCGATAGACAGTGGTATACCTTTCAGATTAGTTTTTACA
AAGTAAACAAGGGACGGTGCTCAATATGAGCTTATTCATTTTTCTTATAA
GCATTTACTTTATAAGAATCAAATCAATAACTCTCGATAGACGGTGGTAT
ACCTTTCGGTAATTAGTTGTTACAAAGTAAACAAAGGACGGTGCACAATA
TAAGCATATTTATTTTTCTTATAAGCATATACTTTATAAGAATTAAATCA
ATAGCTCTTGATAGACGGTGACATACCTTTCGGTAATTAGTTGTTACAAA
GTAAACAAAGGACGGTGCACAATATAAGCATATTTATTTTTCTTATAAGC
ATATACTTTATAAGAATTAAATCAATAGCTCTTGATAGACGGTGACATAC
CTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGGACCGCGCTGCTCAA
TATGAGTATATTCATTTTTCTTATAAGCATTTACTCATAAGAATCAAATC
AAAAACTCTCGATAGACGATGATATACCTTTTGGTAATTAGTTCTTACAA
AGTAAACAAGGGATGACGCATGATATGAACATATTTATTTTTCTTGTAAG
CATATACTTTATAAGAATCAAATCAATAACTCTTGAAAGACGGTGATATA
CCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGGACCGCGCTGCTCA
ATATGAGTATATGCATTTTTCTTATAAGCGTTTACTTTATAAGAATCAAA
TCAATAACTCTTGAAAGACGGTGATATACCTTTCGGTAATTAGTTCTTAC
AAAGTAAACAAGGGACGGAGCACAGTTTGAGCATATTCATTTTTCTTATA
AGCGTTTACTTTATAAGAATAAAATCAATAACTCTTGATAGACGGTGATA
TACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGATGGCGTGCAAT
ATGAGCATATTTACTTTTTATAAGCATATACTTTATAAGAGTTCTTAAAA
GTCAAACAACAATTGTTCTTAAATTGGTCTTATTTTTTAGTGATTTTAAG
CCTCGTTGTTCTTGTGAAATTGTTTCATCAAGGCTCGATGTAAAGTAGAT
CTCTACTTCTTGTTTTTCCCATGCAGTTCAAATTCTAGGCGAAATTTTCG
ACTTTAAGTCGTCTTGTTTTACTTCCTTTTGGACCTACCCCGGTGGGCTT
TAAACTCAACGGGATTGCCCCATTGTCCTAGGGGTAAATGTCCAAAATCG
TATTTTTAGAGCTTTTTCTTTATTGGAGTTGTGTGTATTTCGCACATCTT
ATCATGGACAATTTCGACCTTAATATGATGATCCATTCTGGACAATTTAC
CACCATCAAAGATGTATTTCTACTGTCTTTAGATAAGTCAGTCGTCATAG
TAGAGGCTACGTCGATGATATTGAAAGTCATCGTCAACAAAAAGCTCTCA
AACACCGCTCCTACCTTCGATATACTTTCTTGGTTTCGTTTGAATTCGGT
GAAAATCGAATTAGAGAGCGTCAACTATATTTTCTCATTTTTTGTTAGGT
GCGTTGTTTGGTGGATTACGGAGAATTCGAAACGGAAGATGGAACCGTTG
TCATCCTCAAAAAGAATAGCCAGGTAGGAAAGGTCAAATTGTACCTTTTA
AAATCTTCATACTTTTGCAAAATTTGTTTGAGAGTCCACTGAAATCTCGA
TTGTTTTCAACCCAAAGGTGAGAAGAGTGGTCTATTATTTTACCAAAAAA
AGGTATTATGAGTTTACGGATAAGAATTTTCTTTTGAATCAACAAAAGAT
TTTCATCATCAAACTCACAATATCCTGTCAAATATGTATAACTTCTTTTT
AGTGCACCCGGTGTAGTATCTAGGTTTGGTTCTAGCCTCTTATAACCTCA
AATAATATAACACTTGGTAATAAACTTTTCTTTTAAGAACATCCAAAAAA
ATTTTAAGCCTTAAAATGTTCTTAAATTGTTCTTTATTTCACCTTTTTAT
GGATATTTTATGTTTAATTTCCTAATAAATCGATTGTGATTTTAGAGTCC
GCAAAGCCTTGAATGTTTTTAACTTGTTCTTAATATTCTGCCCATTTAAG
CATTATTTTCTTATATACTGTAGTTTGTTCTCATAAAGAACTTGTAAACA
TAATGGAATTGGAAGGTAATGATTTTCTTTATTTTTCAGCATTTCCTCCC
AACAACGCAATGTGAACATTTAGTACGTCAAGGAATTCTTGAACATATTT
TAGCATAATTTTTCTATAAGAAAATTTAGATTTAGAATTTTGTGTAAATA
TTTATATCGGAAAGCAAGAGAATATTTATTAAATGGTTTTTAAACGTCTT
GTGTGTGATTTCTTTTTTTTGGGGGTGTAGGGTTAAATTCAGGATAGTAA
GAGATAGCAGAGGGGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007628TCONS_00007628Clytia hemisphaericatranscript
TCONS_00007627TCONS_00007627Clytia hemisphaericatranscript
TCONS_00007626TCONS_00007626Clytia hemisphaericatranscript
TCONS_00007625TCONS_00007625Clytia hemisphaericatranscript
TCONS_00007624TCONS_00007624Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:530030..540146 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GINS1DNA replication complex GINS protein PSF1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.56	76.88	33.37	31.52	26.45	19.1	22.18	22.44	22.91	17.44	23.31	17.02	11.94	15.81	13.85	16.05	28.54	25.57	9.86	9.45	19.38	18.67	44.07	40.32	21.45	17.11	12.7	12.31	22.43	23.75