XLOC_004361 (gene) - C. hemisphaerica

Overview
NameXLOC_004361
Unique NameXLOC_004361
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:93504..99245+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004361 ID=XLOC_004361|Name=XLOC_004361|organism=Clytia hemisphaerica|type=gene|length=5742bp|location=Sequence derived from alignment at sc0000079:93504..99245+ (Clytia hemisphaerica)
aaagaaattttgaagatagaaaatttcactttttggaaAGGAAATGCTCT CTCTTTTTGCTAAcatgtgattttttgacttaaaaacatCATGGTGTGCT TTTACGGATTGCCTGTATTACTGATTGCAAGCTGTTGGTTGACCAGCGTA AAAGCCAATTTCAATATCAATACCACATTTGCCACGACCTCCATCTCCAA TACTACATTTCGGattaaaacacaaaaatataaaaaactcaACAACACAA TATTCAATTCAACCAAAATTGATTGGATATACTTAGCACCAGAAGCCGTC CGTCTGCCATTGGTGGAATGTGGAAAATTATGCCAAGAAACTACAGATTG TTGTGGTTTCTTTTATGTCAATGGTGACAACAGTATTATGAATGAACCAC CCGCCAATCACACCAATGAAACATATCCGAATTGCTATTTGAACGATATG GCTTTACCAAGATCTAAAACAGCTGTTTCACCAAATGTTGATTATTATGA AATCAAGGTAATTTAAATAAGGTGCCGTAGTATAGgggtagtcgaccttg gcttctgtgcaggtgGCCacggttcgattcccactcacggcagttcactt ggcaagtgaacgttccttcgcccgggtcaacccatgccatgtgaggggaa ttgggtagtcagttcaaggtgctgactcattagtaagcgtctatagttgc gagaataggcctctaaagcctcctgcaactcaaccaaatagaaatagaaa ttctaatagaccttatcggagtttttgatttttctaaaaaaaagcgATGC ATAGGGGGCTGTTTCGGGAgaattacaatagaatttcctcaaggaattcc taagagatttctattataatagctcccgaaacaatcccacaatgcattgc ttttttagaaaaatcaaaaactccgataagatctattgttGTAAGAATAA TTTTTACCCGTTGGCTCAAAACACCAATAAATAAGAGCAGTTTAAGAATA ACTCTAAACCCAACGCTCGTACCCGGAGCCACTTGCACCAATTTTTGAGT TTACTGATAAACGTGATACGTAATCTTgtgcgctatcagaatcataaaaa gtgAACTGAGTGACTGGGTTCAAGTTTAGCCCAAtattaataaattttca aaaaaaataataatcagATTTGCAGAAAGaggatattcatgatattcgaG ACGTAATGTTTTTACGGAAAGatcccggtttttgccagtagtggaaAATT TTGTACAACTTTTGTCTATTTTAAATTTGCCACCACTGGCAACCGGgata tttccgtagaaaacattactccaaccaatcctggaaatatcttgaaaata ttatatttccatatacatttttaaatatggaaatatgacttttctatatt tccaaatttgagaatatatcatattttatgatattTCCAAATCCGAAACA TCATATTGTCAAAACATTTCTAACTTTTGGAatcaccggggacgattttt tggcctatttttccagcGGGGTGGAGGGTCCACCGGATCTgagacacagg ggtgttaattATCCCCCTTCCCAAACTTGAATTATTTACCCTGgcattta aatttcatttttcattttacagAATCAATGTACAAAAACATCTACCAACC CTTGCGCCAAAGGTGATTGTATTCCCAACTTTCAAACCGATTCCTTTTCA TGCGATTGTTCGACCGCTGGTCTGGTCAATTTTAATGAAACTGTTTGTGC TACTAAAACTACCTGTAAGTTTTCAttgctttcaattttcaacGAGCATA AAGATTCCATTTTACAATTCTTCTCATGCAATAGCACACCGTGCTGAATC TTAAATAGTAGCAAAATCAGCACAAATTTATTCGTTTGTACGACACTTGC AATCCAATCCTCTTTTGCGTTAATTACTCTTGTACGttaataacttttaa aatatcactagccataactttcattaaggtgccaccgcagcaaaacgaac acatagagttgaatttgccttcaaaaggaatgatcttagccctacagtaa tttttgttaagagtgacctctcatctgagacaaaattctttcaaatgcta aaaaatgtgTCAATGTGTccagggagtgatttacagtctacttagagtga catccgtgccttgtcttacacgtttttgtataagaacaatttcataagaa tacgaggctgaaatttggctaaaacctaagaacaaattaagaagaatttg agcctcagatttcagaaattactgagaagtacaggtTTCCAATTTCATTA GTAttgacatttaagcctgaaaaactcaaataaaatcaagcgcagcccag ccagaatcatatgacttactggtttttcctataaaaagcgtatatctgaa gatactgctcttcatatgttattttactaatgtacacgtttaacATCATA ACTGTTCGTATACATGAGTCTGtggagtaatatttttaacctatgaagag caCTTAAtttaactacttgtggtataaaaagggaatttcccagaaaaggg aatttccttagattcattaactctccagggataagaaaaagacaaactga gatttcaaaatgagtaatcagatcaaaataactccggaaaagtctttttg atgatgataaaacaatagagagaccgtaagataagaatgctaccgttaag cggaactaaaatactgaaaaacgcgcgcaaaattatgagatgtttgccca acttccttatgcgtgaagctatgaatgccatcctcggtcgctttaggctc cctgcggtggcaaaaaATTTCATGGCTTTCCAATTCGAAATAGATATATC TGTACGGGATTAGAACTCATACCAAgtatttattatacactggatataca agtacctGGTTTATGCTGATTTCTGTTCCAGCTATCATTTCACTAAATAT ATTATCAGCCTAATAGGAACAATTTTGAATtgcttttttcacaatttttc tttGGGAGGTCTCGTCATCTGTAAACCCTAGTGCCCCCGGATCAAACCGC TGGGAACCTTATAATACGGAAAACAGGcagtaatatttcttttttgccaa ttttttcttatttcagtTCAACCACTTGATCTCAAACAAATGATCCTGAC TAATAACCAATGCTATTCCTTGAATAACACAAACGATACTTTATTcatct tttggaaaaaagtgcAAACCACCGATAACTTTTACTCAGAAACAACTGCA GGTATCTACaaggtgtccctaattaaagtatcgagtcgaaacacaactat gagtagaaagttttatgtgcgtgttcacaaaattgtattttaagctctcc ctctcttttctttgtcattacgattaatttataggttgtaactacctttt gtaataagcctgtgtgatggagaacgttcttatattttagcgataacaca cacaaacttttctactcaatcgcatgttcaaactcgatactttaattagg gacaccctgtatactCAACGCTCTCTAAtgcacgggttgcaaaattatat caatgcagtcaaaacatatGATTACTCGAAAATGTTCACGTGATTATTTT ATTCCCGTGATatttgctttacaacttacagctgatatcTTATTAGTGTc aaataaattcgaaccaatcagaaatgaATGTCATgcaacaagcacataaa aattttgattaaactaagcgtgatttgtcttcagactttaattttgcaac ctgtatATTCTAAGTTCTGGTATTCGATACGATCCATTATTTGATAGTAT TGAAAACGAGAAACTCTAATAAAGGACGTTTTACAGTTCGACACGCTTCC TAATTCAATGCCCCCAGcagtttgcgtgattgcgtgaatgggcattttcg gttgcatgaatgcgtgaaaattgaagaaaaaatgcgtgaatgcgtgaatt gaaaaacttgcgtgaacgtgaaaatgtactttttgattgcgtgaatgcgt gaatgcgtgaatctgggctattttgtgcgtgaatacgtgaattttccctt ttttccaccgattatgtgcagttttcccgattttccaatgtttccccgac ttttcccaaaaaattttccgatttctgaaaaattgggttattgagtgaaa ctcgaggaaaattttcgtgaatgcgtgaatttcgaaaaaaaattgcacga ttgcgtgaattgagggtccgctgggggggggcctcTTCAATGGAAATCCA CTTGCCCTTGAATCGAATCAATGATGACTGCATACCTGTTTCTATGTTGA GCAGTCTTGGTCGGTGATGACCATGTTGAACGGTAAAAAAGAATGCAGCT ATTATATATTTTATTATGAATTTTTAGGTCGATGATGACTAGGTGcaccc aactggcacacaacgttgtttcaacgttcacctaacgtaatatggacgtt gtgaacgtttgataaacgtcgaaaaaacgttgtatgCCAGCTGGGCAGTC TAGATGTCGTCTTATTAGAACTGTTTTGGATACTGTACAGCTGTTtacct gaaggtaggggagggcgcaaCTCCTTTCCCTAGATTTTCCCAATTATCCT TGATCCGtatctttagttgctgagcatcaagcagagaggcatggATCAAG GTTatcattttggaaatctttggtatgaccggCTGGGGATTGAATGCACA ACCTTgagcaccgtagctggatgctctaccttcatgctacggtcatGATC ATGATTGTAGCATCGTTCATGTATTCATTGCTTTTTAGGTATGCAGTTCG ATGCAAGCATAATTACAAAGCAAGATACCATTTTGAAAGCCACATTGAAA CTTGTTTCAAAAAAAGCAGTTGAcggtcaaaaaatgaaaatagaagCTAT TCGAGAAAATCTGTCACATAACGACAATGCTGGTTGCAATGACTATCTGT ATCGATCTGGATACAAAACTGAGCTTGATACCGGATTCATAGATGCAGAA GAAACCTTCAACATTGATCTTACCAATATGGTGAGATTAATGTTCCAGCA CAATGATTTTGATGGAAAATACTTTCATTTCTGGACACATCCTGAGTTTC TTACTCAAAGCGGACAATCAACTCTGGCATTTGGTTTTGAAATGTATGGG TTTGAGAATGAAAATAAACAACcaacttttgagattttttggcAAGAACA AGAGCAAGTACCACAAATTGAAAAATAGCTCCATATTGAAACATTTGAAT TTTCCAAATTCTCCTTTTTGCCTAGAAAAACTACACGATAAGTAATACTA CGTAACTTACGTATAAGcagtttcttcatttttttctgttttacatATTT GCTGCTTCAACATCTTAAGTTTTCTACGTATAAGCAATATGCGGCTTGAG tacaggctcggatacagagggaggctataaccaatggaggagagtgcact ttattatcgtattaccttatatggaaactaattactctccatgaataaga tagcctacctcctgtatccgaccctggaGTAGTACTACTTTTCTTCGGTT CCTTTAACTTCCTTACCCTTTTGAGATTCGAATAAGATGTATACAGCTAA TTAGTATCCTTTTTCACCGCTCCCCTGAGAGTACCAGTCATCGCCTGGTC TATATTGGAGGACAGCATTAAACTACCGTTGTTAACAATTTTAGGGATTT TTTTCTATAGGTCCATTTCAATCAAAACGAAAAACATTTtca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007694TCONS_00007694Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:93504..99245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.23 0.34 0.1 0.22 0.13 0.06 0.14 1.04 0.5 0.87 1.29 13.32 10.03 6.11 5.04 1.28 1.48 17.83 20.41 4.77 4.24 1.28 2.42 2.29 4.54 0.83 0.55 0.32 0.19