XLOC_004388 (gene) - C. hemisphaerica

Overview
NameXLOC_004388
Unique NameXLOC_004388
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:579954..587387-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004388 ID=XLOC_004388|Name=XLOC_004388|organism=Clytia hemisphaerica|type=gene|length=7434bp|location=Sequence derived from alignment at sc0000079:579954..587387- (Clytia hemisphaerica)
TGAAAAAGAGGAAGATACATAATTACAATATCAACCAATCAACGAAAAGA
ATCTGAGTTTGAGACAAAATTTCACCGGCTACACAAACTCAACCATAACA
AATTGATTATAAAAAGACAAAATGAAAATCGTTGGTTTCTTGACCTTACT
TATTGGTGTGGAAACTCAGTTGATATCATGGGATTTTGTTTATTGGGAAG
CGCCACCCTTTATATATACAAATGAAAAAGGCGAGGTTGTTGGGTTAATC
CCGGAAATGTATGGTCACGTATCAAAAATTTGTTTAATAGACCCACCCTT
TGTACCTAAAGTGAATCTCAAGAATTATACGCATTTCAATAAATTGTTAT
TCGATAAATCGATCAGTTGGAATTATACAGATCATCCAGAATTGAGACCA
GCCAATGGCGGGAAAGTCACGTGGTTCCCTGTATTACAAATGATTGATGA
GGATGATAAAGAGACACATGAGACTTTGGTGGTTGGCAAACAGATTCAAA
GAAGTGTATTTCAATATGATGAAAATATAGCAGTCTTTGCGTTGNAAAAT
TAAGAACGCATTTAAGAACATTTTAGGCTGAAAATTGCTAAAAAAATAAG
CACTTCCAGGCTCAGCCAAATTTTAGGTGTTCTAATAAAAAAAAAACGTG
TATTTTTTATTGATCGATTTCAGGTACGGGGATATTCGGTTATGGACGAT
ACCAGGACGTTTTTTGAACATCATATGGATGGTTAGCTCTCTGATTATTG
CAGCTCTTCTCACTGGAACCATGCATGATTCTATACAAAAACTACACTAT
CTAGATATCACAGGGAAAACGGTACACGTTTTTTGTTCGTATTGGGTCAT
TCTATTTTATGACCATACAGGGCTGGACGAACATTTCTAGGGGTAATCCG
AAAAGAATCTCCAGGGGGTCTAAAAAAGTGTTCTTTCATTTTCCAGGGGG
TAAAAAAAGTTATTCTTGAATTTCCAGGGGGTGAACAACTGATTTTAGTT
CGTCCACCCTCACTTTAAGACATGAAAATAATTTTTTCGAAGGGTTCTTT
TGCAAATTTTGCCATTTTCCAGGGGGTATCTACACTTTTCCAAGAAATTT
GTTTTCACTTTAAAAGGTTCGTCCACCCCCCTGTATGGAAATTTTATGGA
ATAGCCCATTTCTGCCTTGAAAAGAATTGGTCCAGCAATACTAAATGTTC
ATTATAATTATTGGTAGGCTTTGCGTACCCCTGACCCTAAAACCGTTCGA
TTTTCAAAAATTGTTCTTGGTTAATTATTTTCTTAATGTGTTTTCTGAGA
GAGAAATATAGAAACGCCTGATTCGGAAGCCAACATACATATAGATTACA
CCAAAAGAATGATGGGATTTTTTAAATCAGAAATAAAAATTCGTCTAGAA
GTGGTTGGATATCTGTTGAGGGTTATTTTAATTTTTGTGAAACTTTTCAA
TTGACAGGTGGCAGGTTTGAGAGGTTCTGTTGAAGCAATGGTAGCATCAT
CAAACTGGAACATCACTCTCATAGGTAATTCATTTCTATATTATTCTATA
ATGTGAGAAGTAAAATGTTGATTAAGGTAAACCATAGTATAAGAAAGCCG
CGGCTGGAATGATAACATCTGAATTTCTGTTGTTCTATCTCTGTCATATT
TGATGACTATTTGTTGATCAAGAAATCGGTAATATAGCATCTTTAATGGT
AAACTTTATTGCTCTGTCGTTAATATTTACTCTTCAGTGCTTTTTAAACA
TTAACGATACCCCCTTGATAATACACTTGCATTATAAAATCATTGTAAAT
TGAAATTTAAACAAGCACAAAACGGCCGGGCTGAAAGAACTCAAAAATNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGGGAGAA
AATTTCGTTCACATATAAAGTGTATATGGGTTTCCAGAATAGTAAAATCT
TATTCATAGTGGCTTTGCTTTATATATTGGCGCTGTCAATTCTCATATGT
TTATTGGTAAGCTACTTTGATTCTAATAAAAATTGATCAAACTTTCAGAG
AGTTTAATAATGCAGATTTTTGAGAGAGGGTTGGGTCAGAGTTTGATCTT
AGTCAACCCCTTTTTCCAGCAACGGGATACGACTACCACTTCGAAAGTCA
AACATAAAAAAGTGAAAGATTAATTCGACCAGAAATTAATAAAATAAAAT
AAATTTTCTTCAAAAAGATACATATTTCAATTTTTACAGATCTTGAAGTT
CATCCACTCTTCATTCTTTCCCTTAATATCTGAAAAAGTCTGACTTTTAC
AAAATATTTTTCACATTTCTAGTACAACCAACTTTTGAAAGAACGTTTTC
TTTTTTTCTTCAAAGGAATCAGGTAAAATGAATGGTTACTTGAAAACTGG
AAGAGGAATGTCCAAAAATATATGGTTGCATTTTGTTTCTATGGTGACAG
TAGGGTAAGCGATATTGATAACACCAATCATAAATTTGAAACTTCAAAAT
TTCAAAATTTCAAAACCATATTAGACATTAGAAATCAAACCAAGTATATT
AGCGCTTCTCGGAAACAAGTACCTGAATGGTAAACAATTCCATAAATTCA
GTGATCTTTGTCACCTGTAACATAAAATTTAAAAAGCGATAAGGTCTCCC
AATAACTAAGGTACCTTACCATTTTAAATCGTAAGACACTTTTAATTTGA
TAAACAATAATAATAACAACATATGTTTTAAGTGGCATGCTCCGAAAAAT
TCAAAAGCTTTCAGGCAGCTTGAGAATTGTTTCCACGAAGGGCCACTAAA
ACGTACACGTTTTTTTTTATTAGAACCTAGTTTATAAGAACATATAGGCT
GAAATTCGTCGAAAAATTAAGAACATCTTAAGAACATGCCCAGCCTCAGT
TTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTCAGTGAAAT
CTTTTTAGAAATCAATGAAAAAGTACATCAAGATAATACTGTGAAAATTT
CAAGCCAGCACCTTCAAAATTTATCATTTAAACTGGCCTAAACTGACAGG
AAAGTTGTCATCTTGAATATAATTCTTATAATTTCAATTTTGGCGAAAAA
CTTTTGTTTCCACAAAATACCCATAAAATATGTCCAAAATTAGTTCGAGT
GTTCTATTGGGTACAGATTCAAAGATATCTAGCAACAAAAAAACTTTTTG
TGAAGGAAAATAAGAGAAAAATTTCAAAAACTATCTACCAATAATAAACT
GAGCAACTTGATGTTCTTATAAAGATCGGAGACAGAGATGGAACAGGGGG
GGGGGGTGTAGAAAGCGTTAAAAGTTCACTGACTTTCTTATCTTCGTGTT
TCATAGATTACGGCAGCTATGAAGACATCTTAGACGCAGTAAGAAGCGGT
GAAGTGGAGTTGGGGATAATGAATCAAGTATCCGCCAGTTATTACCAAAA
CAAAATGAACGAAGACTCATCCAATCCTAAACTTGCTATTGTTAACCAAT
TACAAATCTTTGTACCAATATACATGTTACTAAGTAATTTACCGAGGGAA
CCAGAACTTTATCAAACTTATTGTTATCTGAGGGAAGTCAAGGAAGGCTT
AAGCGAAGCTACCAGGAAGAATGTACCATCAATTAAAGTAAGTGAATATT
TTTTTTGAAAAGAGTGCTTTTGATGATATGCACGATTGCAATGTCTTCAA
CGGACCCATTAAGCTGATTGGTTGAAAGTGACGTATTGACTGATTTTACG
TCACTTACAATCAATCAGCTATTGGGTCCATGATGGAATGTTAGAAGACT
TTGCAATGGTGACTTTCATAAATTTAAAAAAAAAGTTCAATCTTCATATA
AAAAGTCAATATAAAAGCCGTTATTCAGCCAATTATAAATCCATGGTGAA
ATACAATCCTTCATCTGACTAAAAATCATCATAAAATGTGTCCATTCCCA
AACTTGACTAGAGTCAAGATTACACCCCAATCTTTATGCATCAAATTTGA
AAGAATGTCAATTTAATAGAATCGTCAAAATTTATTTTCATATCTTTTAT
CACAAAGGTTGAGAAAGTGTATTACGCGCCGATGTCTGAACTATTCACAG
ATTTGAATGTGTATACCATATACGTTATAAAGGGCGCCGTTTTAATCATA
ATGGGCATATTTTTCGATATATGGTTTCTATGCCGACGTAAAGACAAGGG
GTTGGCAAAATTGAAAGACAATAATAATACTAAAGAGCCAACTCTTGAAG
ACCAGAAAGAAGAGTTCAAAGAACTTATGAATGAAGTTGCTCAGATACAA
AAAGAGATAGCAGCAATGTCAGAAGAAATGATTAAGGGGAGAAAGAAACG
AACAGAGGACAAAAAGTTTATACTTCAGCAATCTTGATTGGACGGTTGCT
GGTTGACATGATACTAAAGATGGGGATTATAGGGATCGAGGTCATTTTAA
CAGAGCGTCATTTCAACGTTCATATCATGTCTTCATTGAGATGTTTTAGA
CGACAGACGGGCGTTATTAAGATGTTATATGAAGATTATATCGAAGATGA
CAGTGTTGGTGATATATTGAAACGATAAAGTACGTCGATTCTCAAAAATA
TACTACCAATGTACTCTTACCGTAAGTTGGTCTAATGTCGACATCTCTTA
TGTAATTCCGTTACAATTCTTTAGAGTTGGGATAATAGTATGGTCGGAAT
CACTGATGAAATTACTTTTACTTAGCTTAGTCATCAGAAAGGTAAAAATT
GTTTGTCTACCAGTGATTCCGACCTATCTTTTTCCGATTCCGATTCCTAT
CTTTAAAAAAGGAGTCGGGATTAGACGAGGGGTGTCGATATTAGACCAAG
TTACGGTATCAATCCTAAGAACATATGTCATTTCTCGGTCGAAAGGAATC
ATGGGTAATCAAGGATTGATACAGCAAAACGTAAAAAAGTTAACATAATT
TTTTACTGATATAGTGTTCGTATCCCTTTCAGAAAATCTCTGAAAGTGAA
CCAATTCAACCTTTGGAAGGGCCGTTATTAAGAAAGACTTTATTTAACTT
GTACTTCTACCTTATGGAATTTCTGTCAGAGCAGGAGGCAAGGATAGACA
CAGTAGGTAGTTTGTTTTTTTGGCAGGTAATAATATGGGCTAACTCTAAA
AGTTTAGGGGAAAATTTGTCCCAACGGAAAGGTGCCCCCGTCAAAAATTA
AAATTCTTTGTAAAATTGTATACTGTTGTTTATATTATAACATTTAACAA
AACTGATAAAATTTTATAATATTTTAAGTTTAATTTAATTTTATAACCAA
TAATTAACAGATTTTTTGTATAGTAAAAGAATAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007741TCONS_00007741Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:579954..587387 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.08	0.23	0.16	0.06	0.08	3.24	3.37	4.3	3.41	2.51	2.04	4.16	3.84	1.55	1.36	1.55	1.37	6.43	5.8	3.55	2.25	1.25	2.78	3.02	4.33	0.62	0.38	0.39	0.33