XLOC_004438 (gene) - C. hemisphaerica

Overview
NameXLOC_004438
Unique NameXLOC_004438
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:237360..240760+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004438 ID=XLOC_004438|Name=XLOC_004438|organism=Clytia hemisphaerica|type=gene|length=3401bp|location=Sequence derived from alignment at sc0000080:237360..240760+ (Clytia hemisphaerica)
ctaaaatatttttatttgtgcTCTCTagatatgaaaaagaaaaaattata
aaacgaATCCAATAGCATTGGATGTAAAAGTGAAGATGTTATCACttcaa
atgagaaaaacacTTGCCAGTTACAGAAAACGCATTCCGAGTTTGTTGGA
GCGTACAATATGTATTGGACATACAGTTCAAAACAAACACACAAACTTGA
GACAATATGCACCATTGAAAGACAACCAAATGAAATATATAACAAATACA
ATGTCATCACGTTATTTAACCACGACTGCATGTAAACTTGGTGTCAACAT
AAGACCACATCAATCGATACCAACTAGATTAGCAGCCGAGCAACTTGTTC
GTGACATGACAGAAGAAGAAAGGCAGAAAGTGATGACTGTTTTACAAGAT
CTAGAGCAAGAACACTCGTTGGAGAAAGGTGGTCAACAAGAAGAACCACC
AACTTTCAATCATCTATGGCTACGTAAGTTTCCCCTCTTTTTATGCCCAG
TCCTTTTCACCACCTGGTATATGAGCTAGCTCACTTATACTAACCTAACT
CGAAATTGTAAATACAGCCTTTTTTACTTTCTACCTATTTTTACCTTCCG
AAATTATATGTTGCATTCATTCTTTCCTTGTTACCTTTTAGTTGCGTTTG
CGAATTCCATTCCCTTCATTGGCTTTGGCTTCTTTGACAATGCTATCATG
ATCCTGGCTGTAAGTATTTATTACTCCCCCAACTGCCTCCAAAGCAATTT
GACTCTTTATAGTTTAAACATGGGGGCTAGTTAAAGATGGGGCCACCTCC
ATTAAACCGATTCAATATGGAAACGGGGAATTTACTTCCTATTTGTGACG
TGGTATTAAACCTTGACAGTACTGATCTAATACACAGAAACGGATAGCAA
CACTTAGTTACGGATAGTTTTATCGTCCTAACCTCTTAATTTTGCAGGGT
GAATACATTGATTATACGGTTGGTGCAACtctgggtatatccaccatggC
AGGTATAATAAAATTCTTTAATTCATTCTTTAAGGCTTGAAGGGTTTAGT
CTTTGAAGGGCTAATAGCTTGGGTACATTTTGAACACGACCTTTTCATGT
TGAGACGACGTTCAACCAAGTATCATTTTTATTctgtatctatttttctt
tagccGCTGCCATTGGAAATATGATCTCTGATGTTGCTGGTATCGGGTAA
GTAACACTCGCTTCCTTTTCCATATCAAGTATTGAAGGTTTTACAATTTA
CTCACTTGGTTGGGTTTTCTTGACCTTGTTCTAGAAAGAtttattaaaga
aaaatggTACTGATATACTATTGGATAGACCAATATAATTATTGGGACAC
TCGATATTGTACGCTACCGTCATAGTGTCCTTGTGGGTTggttgcccccc
cccccccaaatttttttcaaaaaggggttttttaaaaaattagggggggg
gggggccccccccccccctagatttttgaaaaaccccttttcgaaaaata
tttcgaaGCCTCAAAGTCAAGCGACATTTTTGTattaaaattgaatcatt
tCTCTGAAAAAGGCATGTTTTACATTGTTTTGctaaaaaatgcataaaat
atgCTATATTTTACTGCTTTAAAGCCTGAAAATCTTTTCCCCCACCTAGA
GATTTTCCCATTTGCATCTAATATTTGTCCGTcccttgattttcaaaaag
gtttATTCAATGTTTTCATAGGCTCTATTTTCTTACACTCAATTTTGTGT
TTAAGTCTTGCAGGATGGGTAGAAACGTTAGCATATCGCTTTGGATTTGA
CGAGCCAGCTCTGACACCTGCACAAATGTCAATGACGCAATCAAGAGTCG
CTTGCCATTTCGTAAGTGAACGATTTTATCCTTGAGATATATTCGAATGT
TAACTGAAACCAAACTTTTCGATACGTACGAATTCTTCAAGCACCAGTTA
TAAGCACTTTTCAGTCACTCATTCGCACTGTTCAATTTATTCATTACAAA
CACAACGTTTTTATACTCGAATCGAAGGTTTCAGTAAACTATTTTTGACT
GAATTTATCCTTCCTGATCAtaggtttaatttttttttttgcttacttgt
caattttaattcacaagctttttcacattggatcgacacggatgtggagc
aagattgatcagaaagaggaaaaaacaacattttttgcttatatcagcat
aatataacaatggcaacacactgtcctgatataaaatatgtgcctgatat
gaaacgggaacacttatgtaaaaataaaacctttaattgtTTGTTGGATT
TTTTCACAACTCAGGGTCGTGCGATTGGCATCGTGATAGGTTGTATCATT
GGTATGGCGCCTTTAGCCTTCATCTCATCTAAGGAACATTGTgagaaaga
gcatgaaaaagaTGAGGAATGAAGAATGTATCTCACTTAGATAGCTGTTT
CAAGTATGGACTATCAGGCATACCTGTATGTTGTTGTTTGCTTTCTTGCT
TCATTTTTGTGATTACATGACAAAAGAGTAAGGTGTTATTATGAATTATG
ACAGCTCCTTGCTTGTTGAACGGACAAACGAACAATTGAGCTGCTGAAAT
ATTGTTGGGACAGGGTAGGTATCCGCTGTATGTTTTACCACATTGGTTTA
CTTTTTGGACATAAACGAAGCTacgaaaacttttttgatttgcatttttt
aaatcattattttctattttctatttagtatttttaaataaaatgaaatt
tatgTACATGTGATGTGTATAGGTCAAATAACTCATAAAAAAGattgttt
gagatttttttcttctgcaGAATCCTTTCATGACGCTGAGCAAAACATCC
GAAAACAATTTACCTCACTTTTTTCAATCACAATTTTTTAAGTTGGGTAC
TTACACGCTTTTTACACTGGAATTCTTGCTACTTGCATTTCTTGGTTTTA
CTCAGGGCTCACAGAAAGGttcaacaaacaaaaacatctcaaaccatctg
attagtCATAAGAAttgagaaatatcaaaattataataaaaattttatat
cGATTAGACGCTATTTTTATTTAACAAATTTATTGTAATGTATTTACTAC
TTAGATAGACAGACAGCACAAATGAAAGATGCCCAATGAATGACAGTTGC
ATTGCTTTCAATTTATTTCCCGAGCGGTATTTTAACCGGTACACCATTCA
CCAAGACAGTTGCAGAATCTTTGGCCACaggattttgttgttgttgtgct
TTAGCTTGGTTTAGAAGCTGTTGTAGTGTTTGCAATGCATTGGCTGTTTT
AGACGGATCGGTTGCGCATGTGCCAGATCGTTTACAAGCTGGTTGTTGTT
TGTCAGCGCCTCCTGTCAGGTCGATCTTGACATCTGATTGGACATTGGCA
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007817TCONS_00007817Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007817-proteinTCONS_00007817-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:237360..240760 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.48	60.79	46.38	43.66	27.26	18.72	6.09	5.51	4.43	4.89	3.53	2.85	4.4	3.69	3.92	4.76	9.55	8.27	4.51	5.25	5.12	5.24	31.48	27.28	5.96	6.46	6.02	5.48	15.17	16.92