XLOC_004885 (gene) - C. hemisphaerica

Overview
NameXLOC_004885
Unique NameXLOC_004885
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:29385..40234+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004885 ID=XLOC_004885|Name=XLOC_004885|organism=Clytia hemisphaerica|type=gene|length=10850bp|location=Sequence derived from alignment at sc0000087:29385..40234+ (Clytia hemisphaerica)
gcaaaacaaaaaatcaaatggtgCAGTTTGTTTGCTAAACCCTCGGTTTA GCGAACGaacaaaaaacagaaaaaagactgTTGGCTTTGATCGTCTGTTT AGgtaaacttttaaatgaatcaCTGCGTTCGCTAAACcctctgtttcact ttttttggtttttggctAAATGGTATGCACCCTAAAGCTTtgcaattttc attttaaacaatAACAGAATTTAGGCAAAATGCCAATGCAGAAAACTTAT AAAAGATATGCCTCCCTTGGCTCATTTGGTGTGGTTGGTAGCACACGTTC TAACTTATTGATGATCAATCAGATCCCTTATTTATCACATTCGAAGAAAG AGAACACAACTTGTTGTGTGACTGCAGCTTTAGAGAGTGTAATCATTTGG GATGTTAGAAGAGGAGAGAAGGTAATTTTGACCTCTTCTTATTTTATAGA ATGCTGTATAGCTTTAAAATTGTACTTTTTAATAAGTAcattaacttttt taataaataagAATTGCCACTAATTGTAGCCTCAAATTGTTCGCATTCTG GTCTTATGTTTAGGACTAAGATCAATTACCCTAGGCTTACTCTAATTTAT ACGAATTTTACCCTTAATTTGCTTAAAGTTCTGTAATTCCAGGCCCAACT TTGTTCTCAAAATGATCCTTAATCCTATGGCCTTTTGCGGCCTTATTTTT AAGAAGAGcatttatatatttattatttctaaaaattattgttttaaaaa ttttcatttagattgcttttttgaagggcAATGAGGATGAGGTTACATCA ATTGCCCATTCTAAAAAAACATCACTCATTGCTGTTGGGTAAATACTCAT TAAACATCAGTGCTATAGAAACTATATTTGTTTATAATGAAATCTGATTT TTGCTAGCTGATCTATGGTAACAATGTTATAATACCGGTTGAcccagaaa aaagtaaaagGGTTTGATGGCtaactgttttcaaaaaatatacagttgac gctctctaatttgacgttctaTAATTCAATAAGCTCCCCTTTTCAATCAA ATCGATAGTCATCGtcaaatttcttaagaaactctcataaaaaaCACTCT ACTATTCTACATTCTATGTTTCGATAAGTTcccattttcaatgaaaattt gaagtccctTCAAGGTTTTCTGCTCCCTAATTCAATTTCTGGCATTTATG Gttgatttcttttcaaatttttgaatttttttgtccaaacattcaaattt tccaaaacgaaatttaaaacaaaaacagacaGTCAGAAGATGTTAGCCTA AAAACTCGAGTCTTATCTATACTTTCCCAGCTCTATAATCTGATATTTGC CTTGTTTTATTGAATTAGAGAGACttcctactattcgatacgctcctgTA TTTGATGAAATTggaattccccttgaaaatctaATTAGTGAGTGTCAACT GTAAtaacttttgatgattttttttttatcattgtaaagtggaaaggcaa acttaaaacttggtatataactttttaaatttggttgaGTGGTTCTCAAA TTGTAAGCTTTggaagtcaaaatttagtttgGGAAAAGTCCAAAAACACA TTAAAAATGGGGTatcaaattaatgcaattctatGCAGAAAAcctcttat tttcactattttgatAACTTTTACGACTCAATTAAAGCTGATTTTTATAA ATTATCCTAACAAAGAAAAGTTATGGCGAAAATTAGGAAATCAGTTATTA Tgagcgatttaaaaaaatatttagtgaaaaatgttaaaaaatgcttaatt tgattttgattcgtttttggactttttcaaaagtgacttttgactttaaa agcttataacttgagaaCCACTGTACCAACTTTAAAAAGCCCCCAGTAGT AATAGTGTTATCTCTTTTGAATAATGGTTTGAGATATTATATTATAATCG TCTTGAGCAAaaccttttttctcaaaagtttcCAAAGTTTAATATCCAAG TTTAAGTATTTGTTGCATGTCCCTGATCTTTGTAATTTATAATGGTGTTT TCTGGGCctatcaaaaatttatttatttcattatatttgttgATTATTTC AATACTTCAAGAATGATGGTTTACATTATCAGtgattttaaattaaaata atatttccATTTTTAATAATAGTTACAGCAATGGTACAATTAAGTTATGG GACCTTAAAAACAATACCAGTGATGTGTTATTCAGGTTGGCCATTTTGAT TATCTCTTCTTGCATAGTACCATCAACtaaatatttgtttatttttaact GTTAATTCAGACTCCTACACTTGAGGAATGTGATAGCAGTCATGTGCTTG CACACACATGCCTGAAATTTCCCCAGGGGTGTGATCAATCACACAACAGA AATTTAGATCCCCCCATCCTGTACTGCACACTTTTAGACAGCACTCCTTG TCACAATCCCTAATCTCAAAACTAACAATAGTAAAAAGGTAACTCTTACC AGATGTATGTATATACTATGTAAATGACCCAGTTACCAGCacatctaatt tttttttttttaatatcatATTATTGTTTTAGTGGGCACAGATCGGCTAT TTCTTGTTTGTGTTTCGAGAAATCTGGCACAAAGCTCATCTCTGGATCCA CAGTAAGCTAGACATTAAATTATAtgattgactttaaaatttagaaaact aATGAAATGTGTAATCACTGGGAACTGTTTCAAACTGTTAAgggtttttt ttcaagtcatctattataaactacttttttttttttttaggataCTGATA TTATTGTTTGGGACATAGTCGGTGAAACTGGCTTGTATAGGTAATATTTC ACAAAAGGCATAATGACGTAGATTGAAGGAAGATAGAGAAATTTCTTTGT ATTCATTAAAACATTAATCTAAGGTCTTTCCTCTAAACATTTTTTGCATT CTCGCGGGCAACCTTCCTAATTTAGCTAGCAGCATGAGAttgttatttat aaaaaatttattcattaaACTTATTTAGATTGAAAGGACACAAAGGAATG ATAACTGACTGTGTTTTCATGACCACGCACAATGTAATGATATCAAGGTA AAATGGCTCTCaaattattattaattataCACTGCCACATTAATCATAAT GCTTtgctttgaaaagtttttattcAATCGATATCTGTACAAAAATTAGC TGCTTGaataaatttttcgaatttGTTCTAGCTCCAAGGACATGCTTGTT AAATTCTGGGACTTGGACAATCAACATTGCTTTTTAACAATAGTTGGCCA CAAGACAGAGGTATATCTCCCTTTTGATaagtatttttcaaattatttga tAATTCTAAAATAGATTGACCTCAAAACTGCTGGATGATAAAGAAGTTTT TCAGGTTATTTAATCTACAAAATTCTGCTATTATAGGAAAAATTGAGCAA ATTGAATCTTTTCTTCCATAAAGGAGAACCTGCAGGAAAAGTTACATAGT TTTAGTCAAACTAAAAATTGTTGCCTTTTTATAACAATTCTTTACAtaat aatattatattgttttttaaattgtaaGGTTTGGAAATTGTGCTTATTGA ACAATGAAACAAGGCTTATCACTGGTTCTGGTGACGCTGAGTTACGATCT TATGAAATTAAAGAGGCTAGTGATAAAGAAGTAAGAAAATTATTTGTCCA GTTTGATTTTATACTCCTTTTTAGATCTTAAAACGTGGGATTTTTTCTGC CTTGGTCAAGTTTataaaaagtacattttttGTCTCAAAGTTATTAGAAT TTCGAAGATTCTATATTTTCAGGCAACTTGTATGAAAATTTGACATTCAA CATACTCttctaaaagaaattaaaaattggaaattttctcATACTTTTAG TCTTCAGGACTGTTGAGTTGTGAATTGCTTGGCTCGATTTTGAGAGGTGG AAAAGGACGAGTCATCTCATTACATTTAGAAGAAAAAGGGCAATACTTAG CATGTCATGTACGGATACTTTATTTTGTCTTGcttatttggtatttttaa acATATATTTTGCTTCAAATTCAAGCCATTGaactttctaatattttttc tgaACTTAAGCTTATTAATTAAATTTGATAGGAGTTCTTTTAAGTTTTAG CATAATTTTCTATCAAAACCCTTCAATAAGAATTATTGAAAAATCACTAT CACCGTTACAGTAGAATCCTGGATTTCTTGCCCGCTGTCTAATTAATACA ATGCATATTTTATTTTAGGGTGTAGATTCAACATTAGATTTATTTGAAAT TGTTNTTTCAGGTTATTTAATCTACAAAATTCTGCCATTATAggaaaaat caatcaaattgaATCTTTTCTTCCATAAAGGAGAACCTGCCAGGATAAGT TACATAGTTTTAGTCAAACTAAAAATTGTTGCCTTTTTATAACAATTCTT TACAtaataatattatattgttttttaaattgtaaGGTTTGGAAATTGTG CTTATTGAACAATGAAACAAGGCTTATCACTGGTTCTGGTGACGCTGAGT TACGATCTTATGAAATTAAAGAGGCTAGTGATAAAGAAGTAAGAAAATTA TTTGTCCAGTTTGATTTTATACTGCTTTTTAGATCTTAAAACGCGGAATT TTTTCTGCCTTGGTCAAGTTtataaaaattacatttttgtctCAAAGTTA TTAGAATTTCGAAGGTTCTATATTTTTAGGCAACTTGTATGAAAATTTGA CATTCAACATACTCTTCTAAAAGAAATTggaaattggaaattttttcata cTTTTAGTCTTCAGGACTGTTGAGTTGTGAATTGCTTGGCTCGATTTTGA GAGGTGGAAAAGGACGAGTCATCTCATTATATTTAGAAGAAAAAGGGCAA TACTTAGCATGTCATGTACGGATACTTTATTTTGTCTTGcttatttggta tttttaaacATATATTTTGCTTCAAATTCAAGCCATTGaactttctaata ttttttctgaACTTAAGCTTATTAATTACATTTGATAGGAGTTCTTTTAG CATAATTTTCTATCAAAACCTTTCAATAAGAATTATTGAAAAATCACTAT CACCGTTACGGTAGAATCCTGGATTTCTTGCCCGCTGTCTAATTAATAAT ACAATGCATATTTTATTTTAGGGTGTAGATTCAACATTAGATTTATTTGA AATTGTCGATGAAGATGATATACAAAAAGCTTTGAAGAAAAGACgcaaga aaattataaaaaagcaaaagtaaaaagttttttaaaatgaaaaatctatG TTTGAAATCGACGTCCATAACAGAGAAATCCAAGAGAGAAATCCAAATCT ctgcaaaatattttggaatgaagtatacattagtaaaataagaATACTGA AAATTTTGGTCGTTACAAAAAGCAGAATCTGATTTATTCCAAGTGTGAAT TGATTATTGATTGGTTCATTATTCCTTGATTTTAAAAGCAGGGTATAATC TGgtataatattttgttttttaggaaaatgcCAGAAGCAGAACAAATTGA CGAGGTATTAACAAGGAAGTTGAAATCTCAGCAAAGTTTTTTCAATAGAG ATTATGCATTTGAAGAATAATAATATACAAATATGACTTGCAATTGAAGA ACAatcaattttgacatttttccaAACTTTTTTACTAGGATAAGATATTG GTGGAGCGAGAAGTGACAGATGAAATTAAGAAGGTCCAGTCATTCAGAAT GTCACAAAAATTAAGGTAtgttttcttgtaatttttttttttcgccaATC AAACTTCTTTTTGTACAGTAAAATCTGAAAGTTTGACATTTCACAATTGA CCTTCAATCTTATACTTATAGGATATTATAgtacaaatcaaaacattgag tcCTTCAAAATGAATACCTTTCTAAATTCATAGATCAGCCGCAATATCCT ACAATAATACCAAAGAAGAGATCAAAGTTTTGTCTATGTTCATCAATAAC TCGTTTGGATATTACAAGATCGACTTGAGCGCTCTCCCTACAAAATGTCA ACTGCAATCCTTGATTTCAAACATGGGTCACCGTTCTGATGTCAGGTACA AATAAGTTGGAATGGTTTTtcagaataaattttttttcttacataTAAAA AAGATACTGTATTTCTGACTaaccaaaaataaggtaaattattaaaaaac gtTAATCCCATAACTTTGTGCGGCCTCCTTACCCTTTctgtgccgatgtc gtatatatccgacatgcaaattttcactctacttgccaatgtcggatata tccgacatcaaatttatttttttttatatccgacataaaaaaatccaaat agtAATAGTGACAGTATATATTAAGTGCTCAAAAGATTTATTTCAGGTTT ATTTTAGTCTATCATAAAATATATATNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGAT TTAGGTATAAATTATTGGGATTTAGGTATAAATTATTGGGATTTAGGTAT AAATTATTGGGATTTAGGTATAAATTATTGGGATTTAGGTATAAATTGGG CATTTCAACCAATTGCCTCAAGACTCTATGTTTGGAAAATAACAGATTAT TTTATCCCTCTATTCAATATTCAGGACAGTGGGGTTCAATTCAGATGCTA CCTTGATAATGACTGCTTCTGGAGAAAGTGTCAAAATTTGGAATAGGTAT ATTAAAACTTCTTATTATCAGCCATTGAAAATCGTGAAGCTCAACAAGAA AtagaaaattgctcaaattggTGAATGGTTGAAGACACTCTTAGCTCGTT ATTAAACAAGTGTTTCCAGTCCCTGAACGCGGGCTTAGTATGATTGAGTG TAAGCGGtgtaaaacattttcacatcTCCGTCATGCCCTTTTTATAATGC AATCAAATGCTAGCACTCGCTCTGTAGTTGTCTTCTGACCAACAAGCAGA ACCATTAGAAAGCCAATGATCCAGCATAACTCAAACTTGCAAATCATGCC ATTCGCCGACATttgctttattttattttaaattttaacatctaattttt ttttcaggagtACACAAAAATGTATACGCACGATGGACTCtgattattgt ctttgttcaaTGTTTGTGCCTGGCGAACGACACGTGATCGTCGGAACAAA AGTAAGTCGGGTTGTCCGAAAGCAATCCAATTTTTGTGGACAATTTGAAA CTtattaatgaaaatttaaagCTTTCAAAGATTCAGaatttaccttatta cacgaatattactagtcaatTTATTaaaacgaattgaaaaatttcgtgtt aataaaaaacccttaattaaaaccagccgtggtctccttaaaaaagcatt ttttgcgTGTTAAATTCAAGGaagttgaatacttgcctagtaatatttgt gtaataaggtatttggAGGTCAACCCTTTTTTTATACATGAAGATACAGC AAGATGTCACTAATTCCCAGTTCAGAACTCCCGAACCcccaaaatgtgaa aatattAGAACCTTAGCTTTAGAATCATTAACCCACAACTCTATATAGCA ACATTTTTACTGCATCCCATAGGTCTAAAGaatgaaatctaaaaatttat tACTCAAAATGGGTATTGATTTGAAAATGGCTTTTAGTTTCTTGACCAGA ACCTTAGGTGAAAAAAGAAGTTGTTTGACAGGATGTAGAAATTTGTTGTA TTGAAAATCTTTTCTGTTTGAGATAAAGGGCTATTAACAGGCGCTGTTTT CAAACACCCTCTAAATAGTAGTAGCACTCCCGTGTCTCTTGAGTTTCAGC TCAACAGTGAAGACCTACTGTAAATAATCAGTTGCTTTTAAAACTGCCAG TTGCAAAACAAACAGTGATAACACTTTGTCACCATTTTTAGACTGGTAAA TTGCAATTGTTCGACATCAGTTCTGGAATTCTCTTGGAAGCTGTTGATGC ACACGAAGAAGCTGTATGGAGTATTGCACTTTCTCCTGATAAAGTAAGTC TGTATGACAATGCTGTCAATTTCTTAATACAGTGGAGTGTCTTGAATAAG TTAAATGGATGCATTCAATACACTTTACTTCATTACATTTGTTTTCTTAA ACCTCGATAATTACTTTCAGTTTATCAAATACATTCcgtgttgttgttgt ttctcAATAGAACGGGTTTGTATCAGGAAGTGCTGACCACGAAGTCAAAT TTTGGGAATTCGATTTGATCATCGACGAAGAATACTCCTCAATGGGGTAC GGTTTTTTtatatactctcgggtacctaatagccgggggatttggaataa gcgggggtggttggaaaaaatcgaaaaacttatgtaataagcggggggag ttggaataaaaatgtcctgggtggaaaatttttgaaaaggaggctaatac agcagaattaggacaaaagagggaactttcaaaaatatttttccaaaaat taataagcggggggttggaataaaaatgtcctgggtggaaaatttttgaa aaggaggctaatacagcagaattaggacaaaagagggaactttcaaaaat atttttccaaaaattaataagcggggggctggaataagaatgtcctgggt ggaaaattttcgaaaaattaattagcagggggggggacggctattaggta cccgagagtacctttgattttttttctcaatattcTTATTTCCACTATCA AGTTTAAATCAACAGTTTTTCTTTCCACAAATAAATCATTATGTAGGAAC CATGATAAGCTTTTCCTTACGTGAGACCTAGTTTAGCGTCCATGCAACAC TTATTCTAGAAGATGAGTTTTGTTACTTATTTATTGAATTTCTTTACAAT GTTGATAATGCTCTTATTGTCGTTTTGGTTTTTAGTAAACGGCTAAGTAT ATCACACACTCAGACATTGAAAATGACAGAAGAAGTTCTTGCATTGAAAT ATAGGTAGgtacttcattttttttctgatcCTGCTTATGTTAACTCAAGT TTAAAACAGTAATCACGACCGAGTGGTCTCCAATCTATCAATCAGGAAAG ATTCTTTGTAGTTATGATTTTAGAAATATCACAattgataaaaagtaaaa aaaatcttttattttatttaagcCCCGATGGTCGATTCTTAGCCGTGTCT TTACTGGACAGCACagttaaagttttctttgctGATACTCTAAAggtaaa aagaagaaatatcTTCTTGAGTTTTATTTATACTTAAAATTcctattttc tttgattctcTAACTACATTCACAACAACTCGATCTTATTGTTTACTTCT TGGTCTAAACGACTTCTAAACAACTTCCAGTTTGATACAACTATAATTAA CAGATCAAGTTCATatattttgttttacttttcagTTCTTCTTATCATTA TATGGACATAAGTTTCCTGTGCTTTGTATGGATATCTCGCTGGTAAGTTG TTACCATTACCCATAAGCTTTACACTTGCCTTGACGTAATGTGGTATCTT TTCACACAACCTTATTCAAAGTTATCTGacactcgatgtagaaatttctt ccaatacgctaaagctctgaatgTCGGGAAAACTTTCAACATTTGGAAAG CGGAATTTCGCCAGACTGCGTAGAGGATTTTACGGGTTGAGGCCTAAACC CAAGCCCCCGTTTTTGAGGAATTTCTGGTCCAAGCACAGTATTTTCAGGG CCGTTGAGCCCGACTGGAGGGAATGTGGTTCATCACAGGCCGACTGGTAT TCCGGGAAATTAGCCCACTCCATTAGAGCCTTAGCGTGGGTaaccgccaa tccgccatcggaatatcagatattATTCAAAGCAGTTCAAAGGCTGGTTT GCAGGAATATGATAAAAATACCGTTTATTCTCAAATCATATAGGACAGCA CACTTTTAATCACTGGATCGGCtgataaaaacatcaaaatttgggGATTA GATTTCGGTGATTGCCACAAATCCATATTTGCCCATGATGACAGGTTAGT ATTGTATGGCTTTTTTCAATATGACCTCTTTCCTTATTATAAGAAACAAC TCCTTCAAATTCTAGAATGTGCCCTCTTTTCCAAATATCTTTTATTATGA CTGTTGTACGAACAAGACGTCAACACAATCCAAGACATTTCATTGGGAAT CTCACGCTATGAAAATGAACCCTCGAACTTTGAAAATTATGACACCTAAA TTTATTATCGAGTGTTTTGATTTGAAGGTTGAGTATTAGTGGTGGGGTAA TGTTTGATTTCAGGTGTAGGAGTTTTAACATGTACTGGGAAGTCTTTTTT TGGTACGAACTTGCCTCCCCCCCTTTACACACTATTACAAAAGAAGGAGC TcattgtttggaaattttgaaactaaTCTCATTTCTGTTTGTTTCTTTTC AGCATCACGTCGATTCAGGTAACCATATTTCTTCTAAAACGTTATTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008685TCONS_00008685Clytia hemisphaericatranscript
TCONS_00008686TCONS_00008686Clytia hemisphaericatranscript
TCONS_00008687TCONS_00008687Clytia hemisphaericatranscript
TCONS_00008688TCONS_00008688Clytia hemisphaericatranscript
TCONS_00008689TCONS_00008689Clytia hemisphaericatranscript
TCONS_00008690TCONS_00008690Clytia hemisphaericatranscript
TCONS_00008691TCONS_00008691Clytia hemisphaericatranscript
TCONS_00008692TCONS_00008692Clytia hemisphaericatranscript
TCONS_00008693TCONS_00008693Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:29385..40234 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WDR3WD repeat-containing protein 3 Homo Sapiens
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.08 29.5 11.82 11.06 30.54 23.16 32.33 36.17 24.88 29.45 25.38 21.65 27.64 29.54 28.73 33.21 27.89 32.67 6.46 7.07 24.75 24.17 33.68 33.54 25.45 27.93 8.34 6.33 24.31 26.18