XLOC_004983 (gene) - C. hemisphaerica

Overview
NameXLOC_004983
Unique NameXLOC_004983
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000088:487190..492110-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004983 ID=XLOC_004983|Name=XLOC_004983|organism=Clytia hemisphaerica|type=gene|length=4921bp|location=Sequence derived from alignment at sc0000088:487190..492110- (Clytia hemisphaerica)
AGGTTCTACCGTCTAAATATATCTGCGGTACGTATTTTGAATTAAACCCA TCGATTATATGAATGATGTAAGCATTCATTTGAACGATTCATTTTGAATG GTAAAGTGGAATATTTAAAACCAAGTTTTCAAGTATTTCGTCACAAATCA CTTTTTTCTTTCGACGCAAGATGTTTGCCATGTTGTTTTTCACTGTCATC ATTTTGATGTGTACTTTTGGTGTATGTTTTTCAATCGACTTTTCGTCAGT GGCACCCGGTGATTCTTTATTTTTCAAGTCGAGAATCGAAGGTGAAATTA TCAACGCTAATTCTTCTTCTTGGGAGAAAATTATTCCGCTATCCAGCGAA CCTCAATGTAGGTCAAAATGCCATCATTCAACTCAATGTCGGTCAGCAGC ATTTTATCCCACAGACAACATTTGCAAGTTCAGAGACGTAAATCGCCTTT CACCAAACGGCGTATTCGTGCAGAAAGCTGGTATCAAAGTTTATGACAAA CGAACAGCGCCTATTACACCGGTTATTATAAAAACGGTCGAAAATGCTAC AGATTGCAAAGATGTCATGAATCAAGGCCACAAAAGAAGTGGTGTTTACA TGGTTTCAACTGATGTCCAAAAATACGTCCCAATCCTCTGTGACATGGAC ACAGCAGGTATGTTAAGCAGTTATTGGAAAAAGTCGAATCCAATATGCAC TCTTCTCGTAGCCCAATATTTTTCATATTGGATGAGACTACGTCCAAATA AATGGTTTATTATCCGTTCATCGCTAAAATATTTCCCGTTTTCAAGCATA ATTCCAATTTAATTCATCGTGAATTATATGATTTGTTCTCTGTTTATTCA AAAGTCTTATTTTTATTTGTGACGTAACGTCAAAAAGAAGATGCTCAATT GTCATTGAACTTGTTTGTGACGTCAATTTTTGAAATACGCTCTCTAATTC GATCTTCAAGGGAAATTGGATTATCATCGAATAAGGGAGCTTATCGAATA AGGGAGCGTCCTTTATGAGAGTACCGAGTTTATGTATGTGTATTTTTCAG CGACGGAGACGGTAAGGTTCTAATTGGAGTAGATCCTGACCATCTAAGGA CGACGGTAAATCAGCACTTTTACCGTCCTCGATTTTGCGGGGCGGAATTG CGGGTTTTTCCAAATCGCTTCAGTCACTCTACCGTCCTCAAAAGTGCAAA TACATAAACTCGAGTTTCTTGTTGACAGGGACTTTAAATTTCATCGAATA AGGGAGCCTATCGAATAGTAGAATGTCGAATTAGAGAGCGTGAACTGTAT GTAGCCCCCATGGAAGCTATATATTCGAAAATATTGGACAGCAAAGAAGC CAATCAAATGTCGCTATTTACGCGCTTCGGATAATAATCTTTTTTATTTG ACCCCTTTTCTGTGAGGTTGGGCCTACCTCGCGTTTCAAAATAAAAGTTA AAGTGGAAACCCCATTACAAGTACGGGAAGGGTAGGGAAAATAGGGAGGC TAAGAACTGACATATGCTGACATCGGTTTTTAAAGGGTTTAAGAAATCTT ATTGCAAACGTCAAAAATTAGCTTAAATCCCGTTTTGCCACTTTCCCGTA AGGACGATTGCCGGGCCGGACGGCGTTTTCAGCCGGTCAAATTTTCCGTG AGGCATCTCTACCAACCGGAAAACAAGCTCGCAAAGTTTCAAAGACGTAG CATCAAAACTCCACACACAGCGGCCGATACAAGTACTTGTTAATCACACT CTCCAATGCCGCGCAAGTGTTTACAAAATTGATTTCAATGTTTTTTTTCT TATTTTTTTTATTCGAACGTTTTAATTGCATTCGAAATTTATTTTGTGAG AAAGAAAGACTACAGTATGAACAACAATAAAAGAAAAACATGGAGAGAAG AGAAAAATATAAAATTTTCAGTGTAATTTCTGTAATTTACTTTCATAACT GGGAAAAAGTAGTGAAACCCATTGTGCGATTAGCTCGATATCACATAATA ACTCGTACAATTCGAAAATTGCACTCGTGATTTTTTTGTTTCGAAAAAAA AAATCACTCGTGCAATTATTCTCGAATTGCACTCGTTATCATTACATATA CTAATCACATTATGTGATTACATATACAAACTAAAACTTTCATTAATGCA TTGCTACTAATCTTGCAACATTCTTTCGCATTGATGACAAAAGATTCTAT TTCTTTTTCACCAGGTGGTGGCTGGACAGTGATTCAGCAACGTGTGGATG GTTCCATCCCTTTCAATCGAACATGGAATTCTTACAAATTTGGCTTCGGT GATTTCTCTACTAACTTCTGGTTCGGTAATGATCGCATACACAATCTCAC AACCCATTATGGCAACGATAATGACATCATCTTTGATCTCACAAAGCATG ACGGAACCAAAACGAACGCAGGGTACAGGAATTTCTACATCGATGGTGAA TCTAACAAATATCGTCTCCATGTTAATAGCCGTTATGATCCTGATCTTCC AGATAGTTCATATGCGGATGTAACTTTCACTCAAGGTTTTGGCTTACACG ACGGAAAAATCTTCTACACTATTGACGCTGATTCAAGTTTAAGTTGCTCA GAAGAAAAGGGCGGCTCAGGTTGGTGGTTTGCCAACTGTTACAAGATCCA TTTGAATGGAATATATGGACTTCAAGGCAGCGATGCAGGGATCGTTTGGG ATAAAGTCACTTTTATAGTTCCTTCTAGCGGCGGCAATAAAGTTCAACAT CCATTCATCAAAACCCGAATGCTGGTCAGACGAAATAATTGACAGACGTA TACCAGTACTAGTATCTTTGATCATAGATATTCTATTATCTGATTTATAG TTAGTGTATAAAAGATTCGAATATTTTAAGAATTTCAAATGTGTTTGAAG TTTTTGAATTTATTCGAATTTTTTACTATCACTACAAAAATGGCGAAAAC TAGGGAATAACAAGTTTAAACTCCTTAGTGAAAAAGATATTGAGAAATTG AGTGGCTTTTTTTTCAGGCACTTTTGGAAAAATATAATTTTGTTCTGCTT TTTTCTTCGGACATCAACTGTAAAACTGATTTATGTACCGCACTTTACCC AAAACAATCGAAACGCTCCCTTAACAATGAACGGCCTTAAAAACGGCCCA TATCTTGAACCTTTGTTTACCGGTCGACAAGAATCGAAAATCCTTATTCT TAAAGTAAAACCCACAATTGATTTAGTATTTTTTACACCTGCTGTTTTTT TACACGAGAAATCTTTCTCTGTCACTTTGAATAAGTGAACAAATTGCTCT TTCACTTTCGGATAGCATGAGAGAGAATAGCTCATTTACTTTGTGGAATG CTGTCATGAAGANGTACAATTCGAAAATTGCACTCGTGATTTTTTTGTTT CGAAAAAAAAAATCACTCGTGCAATTATTCTCGAATTGCACTCGTTATCA TTACATATACTAATCACATTATGTGATTACATATACAAACTAAAACTTTC ATTAATGCATTGCTACTAATCTTGCAACATTCTTTCGCATTGATGACAAA AGATTCTATTTCTTTTTCACCAGGTGGTGGCTGGACAGTGATTCAGCAAC GTGTGGATGGTTCCATCCCTTTCAATCGAACATGGAATTCTTACAAATTT GGCTTCGGTGATTTCTCTACTAACTTCTGGTTCGGTAATGATCGCATACA CAATCTCACAACCCATTATGGCAACGATAACGACATCATCTTTGATCTCA CAAAGCATGACGGAACCAAAACGAACGCAGGGTACAGGAATTTCTACATC GATGGTGAATCTGACAAATATCGTCTCCATGTTAATAGCCGTTATGATCC TGATCTTCCAGATAGTTCATATGCGGATGTAACTTTCACTCAAGGTTTTG GCTTACACGACGGAAAAATCTTCTACACTATTGACGCTGATTCAAGTTTA AGTTGCTCAGAAGAAAAGGGCGGCTCAGGTTGGTGGTTTGCCAACTGTTA CAAGATCCATTTGAATGGAATATATGGACTTCAAGGCAGCGATGCAGGGA TCGTTTGGGATAAAGTCACTTTTATAGTTCCTTCTAGCGGCGGCAATAAA GTTCAACATCCATTCATCAAAACCCGAATGCTGGTCAGACGAAATAATTG ACAGACGTATACCAGTACTAGTATCTTTGATCATAGATATTCTATTATCT GATTTATAGTTAGTGTATAAAAGATTCGAATATTTTAAGAATTTCAAATG TGTTTGAAGTTTTTGAATTTATTCGAATTTTTTACTATCACTACAAAAAT GGCGAAAACTAGGGAATAACAAGTTTAAACTCCTTAGTGAAAAAGATATT GAGAAATTGAGTGGCTTTTTTTTCAGGCACTTTTGGAAAAATATAATTTT GTTCTGCTTTTTTCTTCGGACATCAACTGTAAAACTGATTTATGTACCGC ACTTTACCCAAAACAATCGAAACGCTCCCTTAACAATGAACGGCTTTAAA AACGGCCCATATCTTGAACCTTTGTTTACCGGTCGACAAGAATCGAAAAT CCTTATTCTTAAAGTAAAACCCACAATTGATTATTTAGTATTTTTTACAC CTGCTGTTTTTTTACACGAGAAATCTTTCTCTATCACTTTGAATAAGTGA ACAAATTGCTCTTTCACTTTCGGATAGCATGAGAGAGAATAGCTCATTTA CTTTGTGGAATGCTGTCATGAAGATGAGACAAAACAAAGATGTAAATAAA ATTGTCTGTATAAATCTTGTAAATTATCGATGTAAATAGTTATATTATTT TCTTTTAAATAATTTATTTGTTTGTTTTTCCCAGCACTTTTATTTTGTGA ATGTATACATAAGATTTTTAACATATCTTAACCATTTTTCATTTTATTTG ATCATCTCTTTACAGGAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008902TCONS_00008902Clytia hemisphaericatranscript
TCONS_00008901TCONS_00008901Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008901-proteinTCONS_00008901-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:487190..492110 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.1 0.41 0.53 0.1 0.11 0.03 0 0.02 0 0 0 5.09 6.45 1.14 1.03 0.37 0.34 16.7 9.17 1.12 0.84 0.27 0.83 0.63 0.94 0.04 0 0 0