XLOC_004985 (gene) - C. hemisphaerica

Overview
NameXLOC_004985
Unique NameXLOC_004985
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000088:641053..646101-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004985 ID=XLOC_004985|Name=XLOC_004985|organism=Clytia hemisphaerica|type=gene|length=5049bp|location=Sequence derived from alignment at sc0000088:641053..646101- (Clytia hemisphaerica)
GAAAGATGTCTTCAATCTAAAAGATGCAGATATTTCTTTGGAAGGAATTG AAATTAAAAATAATTATATAGATAAAAGCATATTGGATGTTGAAAAATCT ACTGTTAAACTTCGAGGATTTAGTTTAATAAACAATACCATTCCAAACTA TGCAATTCAAATGAATAGAGTCGAAAGTGCTACTTGCGAAAATTTCACCA CACATGGAAATACTTTTTTAACTTTGATGAGAATTCAATCATCATATTTC AAAATCTTCAACTTCAAATCAGCTCATGATAATACTGAAGGAAAAATAGC TGTCTTCGACGTTGAATTTTCTGATTTATATTTTACGAACAGTATGTTNG ATAATACTGAAGGAAAAATAGCTATCTTTGACGTTGAATTTTCAGATTTA TATTTGACGAACAGTATGTTTACATTAAATTCCATTGCTATAGGTAGCCA AATAATGAATTCAAAGCAAAGCACCATTTATTTTACAAAAGTTGACATCG TGCTACCGAAATCATTGTCCGTGGAACTCATAGTTTGGAAAATGTTTGGA AAACATCGTGGGCAAATCAAAAACTTTTCAACCGTATGTGGAAATCATTT CAACCCTCAAATAAAAAGACTTAAATCATCGACAGAAATTGTTTGCAACA GATGTCCATCAGCTCAATACTCAATGTCAATTGGAAGTTTTCTTATAACT TTTTTGGAAAGTATGAGCAAATTGGCAAATAAAACAAATGCCATTAAACT CAGCAAAATTGCACAAATTGAAAAAGCAACATGTAAAATCTGCCCAACAG GTTCTCGCTGTCCAGATAACGATTTAATAGCACGTGACAATTTCCATGGC TTCTATGAAAATAAAACAGCAGATTACCAATTCCTTTTATGTCCCGAAAG ATACTGTTGTTCATCAACTACAAAAAATTGCAAATCTCCAACAACTTGCA ATCTAAATCGAGAAGGAAGACTTTGTGGCAAATGCGAAGAAGGTTATTTC ATCAGTTTTTTCAATAATAAATGTATTAACATTTCTGAATGTACCAATGG AAGTCAACATTATTTCTGGACGCTATTTTTCATTTCTTTCATCACTTTGG CTGTGCTGTTAACATTTCTTAAAGATCTCATCACTGCTATCAAATGTGCT GGGCCGATCATAATGGCATGTTTAAGGTAAGAAAGAATCAAATATTTGCG TACAGTAGAGTTCAAAGGACACGATAATAACAAATTTGTAATATTCCAGC AATTTTGTAATATTTTCGGAGTGTTATGATTTTCCAGTTGCACAGTTTTG CAATCAATAGATTGCACACTTTTGTGATTTAAAAAGTATTTGACTTATTT TTTACATTGAGATATTGGATGAGAGCAAAAAACAATCAAATTAAATTTTT AGCATTGCGAATGTACATTACTGAAAAAATAATTATTTTATTTATCAGCT CACCAACGTAACGATAGAAAGAGACCTCCTTTTGAGCGGTGCTGAACCGA GTTAATCCGAGCTTTAAGTATTAAAGTATGATAATATCACTCCCGATAAT ATTGAGAATTTTGAAAAATTAAGCCAGCTCTTTGCAAAGTATACTTGTTT TGTAACGAATGAGAATAATTTTGCACAGAATTCTATAAGAATAAAGAGTT CCAAGTCAGCATTTTGATTTTTGGTTTAAATAACCTTTTGAATTGGATAA TTTGGGTAAATTTCGGATTAAGTCACAATATTGCGAGCTACTTGATAGGA TTATTTCTAGTTATTAAAAAAGGCTAATGAATAACGTTGTTCATAAAGAA ACATCAAAATGCTTGGAAAAGCTCGGAACATTTGGCTTTAATTCAGCTTG TTTGTAGTTTTATGAACTTGTAAGATAAATGGCACTATAAAATGTTAAAC TAAAATACTCTTGTTATACCCTTAGCAAGGTCCCACATTTCCAGAAAAAT TAAATTTACCGGTTGCGCCACAGAAAAACTGTGCCCTAGCTTTGCCCTCC TACATAGCTCATGTCTGATATATACGACATTGGCACGTAAAGGGTTAAAG TAGCTTTTCTCGAGTTCTATGGCTTTTAACAAACAGAATTCTTCTCTAAC ACAAAGAAAAACTTGAATTAGTCATTTATTAAACTTGGTCCTTTTCCGTA TCTGTTCTAGTTGTTAGGTATTTATATATTTTATACACAAGCATATATTA AACAATTTGGTTCATTTAAGTTAATCCTTCCTCTTTTGAACGCATTAGAG TTTACTCTTCAAGTGTTCGAAAAAAACGAGGTTAAACTTTTTTGTGGCCC ACCTGGTATTGGACAAAAAGTGCTTTAATTATTCTAAAAAATTGCAAAAG TACACAAAGGCGCAGGGGTTCAATTACTAAAGTACGCATAAGAGAATTAC ATATTCTATATTAATACATATATTTCATAGCAAGCAGTGATTTTCGAAGA AAGATTGACAAAATTTACCAGCTGTAAACTCTTTTCGGCAAAAAGCCCTT TTTGGACCTACCTCCGGGTACCCCAGCGGAGTTCCTTTAAATTAACCCAT GCCCGTTCGTCCGTTCCTTCGTCCGTCTGTTACCAGCTTTTCTCAGGATT GGCTCATCAGTTTTGTCTGATTTTTGGCACGATGATGTAAAATGGCAATA CCCAAAATGTGAAAGAGCCCGATTTTCGAAGAAAAAAATTTTCCGGCCGG AAATATGCCGGAAAAACTGGTTTCTGGCATTTTCTCGAGATTTTATCTTT AGTTTTTTCTTATTTTTTTGCTCAAAGATGCGTATTAACAATACCAAAAC ATGGTTGAGTCCAATTTTTAAGAAAATTTTTTTTCTGGCGGAAAATGCCG GAAATTGCCATTTTTCTGGGTTTTCATTGGACTTTTGCCTCAAATGTAGG AGCCTAATTTTGGAAAACTTCTTTTTCCGGCCGAAAATGCCAGAGATATG CCGGAAAAACAGTTTTTTTGGCATTTTCTCGAGATTTTATCATTTTTTTT TCTGATTTTTTGCAGAAAGATGCGTATTCGCAATGCTCAAAACATGGCTG AGTTCGATTTTTGAGAAAATAAATCTTTTCCGGCTGAAAATGCCGGAAAT CATCGTTTTTGCAGATTTTCATTGGGTTTTTTGCTTATATTTCTATGTTT TTCACACAAAAACATTATTGATAACAATGCTCACCATCAAGCATGATTCA ATTGTCAATAAAACTGATTTTTGCAACCAGAACTTTCTATTTATTTTCCC CCCTATAACCCTTCCCTCTCCCCCCATCAACAATCAATGATGAATTTATT GTGTTATGCATTTTCGCTAAACGCTATATTTTCTGACTGATTTCTTTTCA TTCTTCTCCTCGCATTGCTATCTAACTTTCATCAGTATGGTAGGTCCATT CAGCATCTAGCTTGTTCGAATTTTCTTCGTCTTTTTTAAATAGTGATTTG TCATAGATTATAATATAGTCTATATATTGCCTTGGCCATGAACTCTATTA AACATAAGTGCGCGCTGAAAAATTACAAAACTGCGTAGAAATTACAAAAG TCGCACATAGCAGTACCCCTAAACCAAAAGACAATTTCATTCGTGGGACA AAAGTCCTCTGAATATATATTCTTGTGAATTCCATTTTAGGAAAACTTGC ACAAAGAAAAAAGAAGAAAATGCCAAAGAGATCGATGAAATGGAAGAACT TCAAGCAGGAGACAACCAAAGAAAACGTAAAGAGATTTCAACTTCATCAA TCTTTAATATTTTGGTCTCTTTCTTTCAGTTGAAAGCTTTGATAACAGTA CAGAGCAATGAAAAAACGTTAATCGATAAAATTATGAACATGGATATTAT GGTTAAAAGCAGTGAAGCTTTAGATGCACTATGTCCTTTCAGGGGGTTTA ATGTTGTATGGCGAGAAGTCTTAAACGGATATACGATCCCATTTTTATTG TTAATGACTATTGCAACTTTGCACTTGATTGTCAAACTCTTGAAACACTT TCGACCATCAAGTTTAAGATTAACATGGTTGATAACGAGATTTTGTGTTG GGTATTATATCATCATCGCTTTTTGTTACAAGAATATCTGCAGAACAGTC TTTCAGCTTTTGAACTGCAAAACAATGAATGAAGTAACATTCTTATACAT TGACGGTACTGTTGAATGTTTTTCTTTGTGGCAGGTGGCAAATATGTTAT TCTTGGTATTTTGGGTTGTTCCTTTCCCATTTGCACACGTTTTGGGCTAC TACCTGTTTAAAAACAAAAAGATTTCTGTGACCACGTATCTCAAATTTTT AATATTCCCAATGTTTTGTATTCTGAGAACTTGTTTCTCAAGATGGAAAA GAACTTTCGAGATTAACAGGAGCGATTTCATTGGCAACAGATTCGCAGAA ATATTCGAAGAGCCCTACAGAGAAAAATTCTTTTGGTGGGAATCTTGGCG ACTTATCGAACGTTTTATTGTTTCTGGCATAGCAGTATTTCTGACGAACC CTATCTATCGCATCTTATACCTGACCCCCGTCTTTGCTTCCTTATCGTAT TTCCACTTTCGAATGAATCCATATAAACGTTCGATGTATATTCTAAAACG ATTAGATACGGTTTCCTGGTTTTGTTTATCCATTCATTTGTTCATCAACG GAATGCGAGCTGTTGTTTACATTTATGATGTACCTAATATCGACTTTATA AGCCATGCACTAGAAGCTGCTAAGATATTGGAGAATTTATTTTCTCCACT CTGGTATCTTATTATTTCATTATTTCTTAGGAAGTTGTGTGAAAATTTTT TGAATTTTTAAATGTTATATAATGGAAACTTTCTCAGCAGTGCTAGTTTT TTAGCTAGTATTTTCAAGACAAATACTGATAAGAGCCTACTCTTAGGTGC CTAATAAAGGCCCCCCTGTGCATAGCACTACTTCGTCACATATCCTTAAT TCGTCTCCTATTGTTATTTTCTCTTTTACGTCATAATATATGCATGAATA ATCGCATAAATTATTTCTGATTGATCTTGAGATTAGAGGTGGTTTCTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008906TCONS_00008906Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008906-proteinTCONS_00008906-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:641053..646101 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0.19 0.04 0.31 0.26 0.8 0.68 0.83 0.73 0.87 0.51 1.72 1.95 1.41 1.14 0.29 0.31 2.34 2.47 0.38 0.32 0.13 0.21 0.99 1.46 0.11 0.11 0.27 0.11