XLOC_005099 (gene) - C. hemisphaerica

Overview
NameXLOC_005099
Unique NameXLOC_005099
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000090:336239..346269+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005099 ID=XLOC_005099|Name=XLOC_005099|organism=Clytia hemisphaerica|type=gene|length=10031bp|location=Sequence derived from alignment at sc0000090:336239..346269+ (Clytia hemisphaerica)
ccGTGAGTCTCTCTTTGCTGTTATATATACTCGGGCCGAGTCCCCTTATA
ATTTTGGCCGCCATTTTGTGTATGCGACCCGACCGAGATCAACAAGAAAA
CTTGAAAAGTGTTTGTacgaaaagacaaagaaatctATCCATCGAATGTT
GtgaaaaatgtgatttttatgTAATTAAACATTTTATATACTTTTGGAAA
CTGCAGGATTAGAATAAACAAATCAGCCATGGCTAATCCACGTAAGTTTT
CCGATAAGCTGGAGATAATtcgaagaaaagaagaagaggCAAATGCAGCT
TTTGTCAAAATTATGAGAGAAGTTTCTGATGCCAGAACTAAAACCCCTGG
TCAAACTGGACACATGCCCCCTCCAGCAACATGGGGAAGAAGCCCTGAGG
TATCATCatcaattattttgataaatttaacaCATACagtaagATGTTCT
CTCTTTTTGAGACTGAACTGAGAATGGTCCAATGAGAGAATAGAATAAAA
CTCTATCCCACACCCACCAGTCAACTGTGTGTGCCCTTCCATACTGATGA
TTCCCATTTATCTACTATGTTGAAGGAATAGGGTGATCATAAGGGTTAGC
ATTAGGCgtcaatcacaaatatcttcattccgcatcctcgttgggtctaa
acagtgagtcggtcggtcagtCAGTCAGAAAGATTTTTGGGTTTTCCATT
ACAGTAAGAcctccatcatccattttttgaagtgtattcttgaaggaaac
tgccagccagcagGCAGCCAAAACAACTGCGTGTTATtggtggtttcaaa
ttatgacctttgaacactgtgacctccgacctaaatggcgcatgtaatga
taaacataGTCAAAATGCCGTGAATGCACTAGAAATCGCTCGCAAGAAAT
tgtcaataataaaatttttgaacgaggGAAACATCATCGACtgaaaaagt
ccgacaaatttaccgactcatcgtctcaattttcgagagtctgTCGGGCG
ACgcaaaacaaagatatttgtgattgccgccttactTGTGAGGTCTGTTT
ATTGATTGTTTATTGctactgtgaagtcgggtaacttgcatcagtgatgA
GAAACTTGCGTTGCATAGCCcttaaatgaatgacctggctggtcattaaa
atgcaaacttaaatcaaaacaaaaatggtaaagtagagctgcaagcggag
ctgtgaatttattttgttttgaaatcttgctgctttgattggtcagtcat
ttgatggctatgcaagtttccctccactgatgcaagttacccgacttcac
ggtaccgTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctac
catttttgttttgatttaactttgtattttaatgaccagccaggtctttc
atttgagggctatgcatgttagcctccactgatacaagttacccaatctc
acggtaggtCTTGTGCTAGCAAAAAGCATGTAGTGTAGAGACACTCTGGC
TGCATCCTAAATCCAGGCTGTGTCAATTGAATTAATCAAGCACCAAATcc
attgaaaatgattgaataggATGGAATAATTGTGGTTCAGTTTGTTGTCG
AAAAAACCAGTCTAAATTTATTCAAACACAATCAGATATTTACCCAGGAA
TCGTCTGTTTGTTTGACAATCGAAAAcagtgagatcaggtaacttgcatc
agtggaggctaacatgcatagccctcaaatgaatgacctgggtggtcatc
aaaatacaaagttaaattgaagcaaacctgatttacaaaatttgagTGTT
ATAAAATGTATACCTTTTTAATAATAAGTCATGTCATGCATAATAATTAT
GTTTATATCATTATTAAAAATGGGGTTACACGACCAGCAGCCATCAGAAA
CGTCTGAATTCCAGCCATCGATAAATTTATGATCGCGCATGATTTTATTA
TCCAACCATGCTGTTTTATTTGCGCGCAATTCTGTTGCCGAGTAGATTAA
AAAATGGTatagtagagctgcaagcggaaacaattgttttgaaattttgc
tgctttgttTGGTCAGGGATTTGATAGCTATGTGTAGGTTACGCCATATC
TTCCTTTCACTTcaagcgtaaaactcctactctttgggatatgagcactg
ctcttgttttgaatattgaatttctccAGATAAATTGCATGCACTGATtc
aaaactctctattgtttcattaaaacactgttttaatgaaacaatagaga
gttttgaaacctaagccaatctgttgtgaaagttgtcttatgtttaaacc
tatttaataagcaattcctggcagcttggtaaaatctgtgtgtttccatt
tcaagaaatttcGCGCAAGTCATCGATGACAcaagaaatcaacaaaagaa
accatAAAAGATGAAAGAGAAAAGTTGTTAGTGGGAAATGATTGTTTGTC
AATCTTGGGGATTTCCCAAACTCAATATAAAGTTGGCGGGTTTCATGAGT
TTTCCTGTTGTATATATAATGAAGAATCCCCGGATTGGCAAacatgaaga
aatagaagaaaaactaaaaattcacctggaaaatatttagattgttttat
tttattcaatcgTAAACGCTTGTGAAAgtgccaaatattttattaTCCAA
TCACAGCAATatcaattgttttattttgtccaatCACAATATTGCCGTAC
GATTGTTTAAAAAGAAGTGTCCAATCAAAATGAAGGTAAAGcactttcat
ccaatcagaatggATTCTTTGAGAAAATAATGCTCACATCAAATTCCCAC
TTTTGTTAGAGAATTAGagataagaaaaaattcatCCCTTAGAATCaagg
attgaaacaaataaagttaAATGACTTTAGTCACGTGGTCGACGAGTGTC
AATTATGTAAGtattttattgttggaatagaaAAGAGGTAAGTCTAGCCT
AGTCTAATTGTCAGCTGTCAGGGGCGCGCAAAAAGAATGCGAGAGTTAAT
TGTATCAAAAGCAAAACACACGGTTATTTACCAAGCTGCTCGGTGGGGTA
ACTAGTGGCcacctatagcagtgcctatagactaagagtaaggcctaaaa
gcctggagcttcTATTGTGTAATCTAATGGCTATGAAAGTTACCCAATCC
CACGGTAGCAATTATTTGATCAGGATTTGATTATTTCCGATTGATTCAAT
TGCGCTTTTTGTTCAAAGtttatttgattgacattgtCTGGTTAACTACA
GTCCTAAAGGATAGACTAGTCACAATACTTATTGACcccaaaaatttaac
aaagaagcgatttgataaaagtgatcttagagaCACTCTTAAAGGTAACG
AAGAAagcaatttgataaaagtgatcttagggACACCctcaaaatttatg
aaaaagcaaTTAGAATAAGAATAGAGTAAGATGAGATGCCTTtgaagatt
tgttttcaaaccaagttttttaatggttttattCATCTTTTCAGTCAGTC
AAATAGTTTTTCTTCAATCAGATATTGACTGATGAGCGACGCTAATTTGC
AGCCCTGCTTAGTggcctttttttagaaattttctctGGTCATTGCCGGC
ATTTAAACGACTGATTATAGCTGTCTATAGACTGGTCCAATTTTAAGGTA
CTTGAAATTGCTTGGAGAGTCACAAATGAGTGATTAAAACCTTTTTCTAT
TTAGGATGtcttgttgaataattaaaaaccccagcatcaaaacaatgata
agaaaaattaatgcaCAATTATTTGTGTTAATGTGTCGTTGTtttaatgc
tggagtttttagtTACTCCATAGGACATCCTaaactagcaaaaggtctat
tatgtaatgtctgtctgtctgtaaaAAGACTGCATGACAACGTGAATATA
GTAAATTAATTTTGACCTTTCTGTTTCTTAAAAAGAGTGTCCTCACAGGA
TACCTAAAAGTACATAATGCAATCATCAGGTTGCAAAATCTGTGAATCAG
ATTATTCTGTCTGTAAGATTTTGTTGTAATGTTTTGGAGTCATTGCGAAA
TGTTTTTGTCCCTAATTTTTTATGGAGTCAAAATAGTATCCTAGTTATAA
AATACTGCTTACTGGTCTTTTGACTATATGACTTTTTGAGACAATTTTGG
GAATTTACATAgtgtttttatgaaaatatttaccAAAAATTTGTTTCTCT
CTCACTTTTAGCTAATGAATATGAAGCAAAGATTCAAAGGGGGCTCTTTA
CCGAATGTGAATATGTCACAGAATCCAATGGCTATGCAGgtttgttttat
ttcaaaatatcaaggTTAATCACAAAAAGTGCAAAAGTGGAAAAATAAAC
TTGTAAGAGTAACAATATGGAGCCATTAGGAACCCATGCTTTGAACTCGA
TGACTTACTTCTTATCTTGACTAAGTTACATCACAAATAAGACTTTGGGT
TAAAAAATCCATGATCTTTCATTTAGGGTATGTACCCTCCAGGGATGCCA
GATATTTATACAAATCGTCATGGTCCTTTGCCACAACAAGGTCATCGGTA
TATGAATGTTGGTCAAGCTCATATGAGAAGAATGGAGCCTCCTTCAGGTC
CAATCTTTCCAAGTAAAAATAAACGATCATGTAAGTCTTATATTATGGAC
CCAACTCGAACCTCAAGAAAAACTTCTTTTTAGTTATCTTAGTTAAATAT
TTTCTCACATTTGATTTTATTCGTTACAAAGTATATGTGCCAAAATTTGT
CGGAATTTCGAAGACTTTTGAAAGTTTGGTTAACATTTGGGTGAGTTTga
aatgaaaacgaaagttaGAGGGGAATATGATTCTTTTAAGTTTAAGAACC
AGACAGACACGATAGAAGTTttgatctgaaaaaaaaaccccTCCATTTAA
AAATTAGTTTAAGTCATAATCTCAATTCttacttaaaatcttaaaatatt
ttgtattttagaTACAGTCCACGCAAGTTCTCCTTATCAAAATAACATTC
ACCACTCACATTCTCCAAACAATTTGCTCCCTGATCAAGGAAATGATTCT
GGTTCTATGTGGAGAaggttttttttcataatttgttttttctggaattt
tttcttTGCCTTTTTTCTGTCTTTGCACACCTCTCATTTATGATttaaaa
tttctccaaaaactAATTTCAAGCTATTTAAGATATTATCTATTTAGATT
TACAatagtttttcaaatttatttctaGAACATTTTCTGATTCTGCGATT
CACCAAACCTTACAGCAGCATCCAAAGAAAAACATTGAAGGTATCCTTAC
TTTTTGTTTGTTAGTCTATCAATTATAGATAATTTCCCTTTCCTTGCATT
TTGCTTTAACTTTTCATGAAGCTTTTTAATTACTTAAAtcatttatttta
gatttattttatttttaaggctCGCCGCTTCAAAACAATTCGTCTGGACC
AAGGGTATGTATTTTGGTTATTTGGTAATTGTTAGAAACTTGATGAAATG
CCATTATGCATGGGTTTCGAATTAAACTATGCACacaagaaaaatatcaa
gtaaacacaCCGAGTAacaatttcttttcagaaatgGGTGTAAGGTTCCT
GAAGAATCATctgaaaaagttttatttgaatttcagaaaaatatacatTC
AGTCAAAATCTATTCACCCATCACTTCAAGGGATAACAAAAGTGAATCCT
TGCCAAAGAGCTCGTTGGTTGTAGCTCCTACCTCCTATTTAACTTGAAAT
TCTATAAGCCGGTTAATCCTAGGAAACAATTTTCTGGCTTGCTTTGGTAC
AGtttaaaaaatgcaataaaatggACCTAAAGCTTGctagaaaaattaat
ttcattagTAGAATCTTTCTTGATTATGGCAACATTTAACGTTCATACAT
GCgtgataaaaatgaaatatctctAAAGTTTGCGCCAAGTGTTTTCACTT
TAGTAAATATAGAAATCTTATCATTATCTTTAGGTCATAAACACTGCACC
TGTCCCTATAGAAGGAAATGAATCTCTCGCAAGTCCACAGTTCGTTGGGT
AAGTTTTCTTCTGATTTTAAACATATCAATATCTGCCGCTTCATTATATT
TATTGGTACTCTTTTTCCATGCTACGCtgtatagtagggggaaatttgtt
cgtttttttgatattaatccttaaaaacagtgtttttcagtgtttttcag
ccagaaacagctgttttgtccagtttttgcgctttccgaagctcaatatc
tcgagttaggtactgaaatcacctatactcgcatcatatcactaatctta
attttttgagagctttccaaaaatatacaacaggtctccgttttctcaag
ctgaaattttcattactttttcaccctatgatttttgcccgagaccgtcg
tatttgtccgaaaatcacaccaaagtgtctgaaacaaaattggcacccaa
gttattttgattcccctaccccttagctttccaaaaatgtgtaacaagtg
ctttgactaaaaaaatcgagcaattttacaaatttccccctactagtaCC
AACATCATGAGTTATTACCTAAGTCATTTTTAGCCTAACCTCCCACCTTG
AAGACCTTTAAAAATTTgctgaaaaacttgaaaagaaTGTGTTTGTTTTG
TTTCGTTTTAATTCGATTTTTCCAGTATATGGGACTGTGTTTGAActaca
aaatttcttattactgATTTGCAAGCTGATAAATAGTCTCTATTTTACCA
CACTGGAGGATGTTAGTCCTATTATTTTTAACGATATAAATGTCGAAGAA
CATTGAAAAATGCCTGTTACATgaccaaaaaaccttgaaaactttgAATA
CGGAGAAAAAGATTCTGTAGACAACCTTTTGGACATAATAAACTGATTTC
CTAATTTCTGAAATGGCATCTGGAGTATGtgtattttattcttttttagc
TCCCCACCTGTTTCAATGGCTTATGCAAATGATACTACAAACAACACCAA
AAACATGCAAATGCAAGCCAATACAAGTTCTCTACCCGACTTGTCAAACT
TGTCGATCCCATCACCAATTCATGCTCCAATAGATGCTGAACAAGAAAAT
TCTGCTGCAAATTCACCAAACCAAAACAACCATGTATCTCCCGAACAGCC
TCAGTTTCATGTCCCATCATATAGAAATCCTGGTAGAAGACCAGTCGGTA
AACAAATCTATTCTCGTCAGATTGGATCTAACCCTGATGTTTTGGAAAGT
TTGCATCGTGAGCAAAAATTGAATCTGAATTTCGCAAACCATGATAAACA
AGATAACATTTCAATAAACACTAGTACCGCTAATCAATCTGCGCCGTTAT
CTCCTGTCACGCCACCGCCTTTTTATTGGAATTCCACGCCCATGTCACCA
TTGGCAACAAGTGATTTaatacaacaacaacagcagcaaCAAAATTCTNC
CAGTCGGTAAACAAATCTATTCTCGTCAGATTGGATCTAACCCTGATGTT
TTGGAAAGTTTGCATCGTGAGCAAAAATTGAATCTGAATTTCGCAAACCA
TGATAAACAAGATAACATTTCAATAAACACTAGTACCGCTAATCAATCTG
CGCCGTTATCTCCTGTCACGCCACCGCCTTTTTATTGGAATTCCACGCCC
ATGTCACCATTGGCAACAAGTGATTTaatacaacaacaacagcaacaaaa
ttcCCCACAGGCTGAATTACAACAACAAATGTCACAATTTCAAATACACG
GTGGTGAAAATGTAAATAATGGAATGGGAAACCCACCGCCTTATCCGTAT
ATCAACGAAAATGAAACCAGTAATAACTTTAACTACCCCTTCCAAAAGCA
AAGTTTATACAGGATAAACTCTGGTCCTGCGCAATTTAATTCTAGAAGTA
ACCATGGAGatgaatcaaaacaaatgtgtGATAGACAATTAGACTCGGAA
TTGCAAAAGATAAGACAACAGGATAATGCTAATAGTGAATTAAGTGAAGC
AGATCTAAATTCAGTACGTGTTGATCTTGACCCACTTGATTTCGGGGATG
TACAAATTCTATCAGGTGATAATTCCCAACTTGTTGACCAAGGCGCAGAA
GAAAGTTTTCGACTGGAGAGAGCTGGTTATCAGTAACAGACAACACTCGG
AGGTcacacaaaaacacaaaaaactaGGTTGTAAATAACGATGTCTCGAA
AAAAGTGAATCGGAACCTTTCTGTCAAAGTTcaataatgggctcttccag
aaaatgttcttACATGGGGTATGGAGAATATAGTGTccgtgaaaaatcta
caaagacAAGctgggggtaaacttgctctgtttggaggtaattttgaggg
taattttgaatcaactgatgcttgtccggggggtcaaaagtcaagatgtc
tgggggtaaatttccaaaaatgttatatcctccatcccccatattcaact
tttttctggaaaagcgcAATATGTCTTTTCGTATGATAGACATTGTGAAA
GGGGTAATTCTGGATTTTTTTCATCGTAAAAAGGGTTATACGACACACCG
AAAGAggaatgtttatttttcattacaaCAGCTGCATTATTATGATGAAC
AGACGACCACCTTGATAAAATCACCGAAttcgaattttattttctttgga
CTGACTCTTTTCTTTTATCCACCTGTAAAATTTTATGCATAACTCATACA
CTCGAAACATGGTAGTGACCAGATGCATTAACGCCGGTCTCCATAAACAA
GCGCAAGCCGCCATTATGCTTTTCAAACAAAGCTACTACTAGTACGTTAT
TGGTCGTAATTAAAATAAAGCATTTAATGGTTCAATCCGAAGTGAAGTTG
AACTGAACCAATTTTTGTACATGACATATTTGGTCGCTAGCGCACGCTTA
CGGCGACCATCACTCATGCTGATATTTTGTCAGTTTTGATGCATTTCATG
GTCACTATTTTTTGGTCATGTCCAAagttaaattttaaaaagaaaatttt
aaaattttttgaaagaattttttttcgcttttttttttgctttttttgtg
taaattttttcaagaggatattttgatttttttagtaCTTATACATTTTc
acaccttttttttttttttttacttcagaaaCTACTCTAGAGCTTCACTT
AATTTATGTTTCTACCAAAATATGTGATTGAATAAAGATAACCAGGCATT
TTGTTATGCTTTGGGGACTTCCTTAGCATTCCTTTTTGCGTAGGTAAACA
AAAAGATACACATGATAAGGTCATTCTTAACTTTGTGAACACAAATAATG
CGGTACTATAGAAAACCAACTGGGAAACCAAGAACTTTCATGTTTTCTTA
CCTTTTTCTCGTCTTATAAGACTGAATATGAATTTTATTTGTATTTACCg
atatagatttttttatctgtttattgaaaacaatttttaaaatttttttt
ttcttattttactttcctttaaaatttattttttggggGAAagtacaaaa
ttttttttttgtgttcatatGAGAACTTATTGAAAAATGTATAATACAGT
TTTACACAATCGCTTTAAGATAACACCGAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009098TCONS_00009098Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009098-proteinTCONS_00009098-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:336239..346269 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.51	1.58	0.85	0.83	60.5	45.22	30.98	33.88	13.63	18.73	14.04	10.96	11.71	12.49	11.31	13.64	11.49	10.4	10.4	10.41	8.84	9.64	4.9	6.48	11.71	14.1	12.56	10.33	6.97	7.45