XLOC_005160 (gene) - C. hemisphaerica

Overview
NameXLOC_005160
Unique NameXLOC_005160
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000091:299242..305545+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005160 ID=XLOC_005160|Name=XLOC_005160|organism=Clytia hemisphaerica|type=gene|length=6304bp|location=Sequence derived from alignment at sc0000091:299242..305545+ (Clytia hemisphaerica)
ATAGGGGCTGCTCAcattgttaaaaagaaacttgaatgctttttcaaaaa tatttctcatttaaaatttccttattttcatttaaaattttaattaataa tAAAGTGATAATGCTGAAAACCATCCAACAAAGACTTTCAACACAAGAAG CTCATATCATTTTGAAAAGACTAATGGCCACCAAAGCAAACCCTATTGTA GCAGTTGTAAGTAACTCAATAACTTTATCTTCTTTTAAATATCTATTAAT ATGAAGATACAAACCAGTATCAACCAACCAATGTTCAATTCTTGACTCCA TGCCAATGTAAAGTCAATGTAAcctaatatcaaaacatttttagtCTGGA ATTATTAGAATATATAAAGTAAAGCTATTAGCGTGGACACCGTATTTACA AATCCAACTCGGACGTTAAAGATAACTGGTGCACTCGCACGTCTGGTCTC ATTCtattttctacaaaacatcaaaCCATGTTCGATTTAAAGTAAAGCTA TTATGTACAGGATGTTATTTTTTCCATAATAGGTGTTGGCTGGCTCTGGT GTTTATGATGGATCAGAGGTGCACGAGGCGTCTGCGTATgttacattttt ttgaaaaacttactaAAGCAGTTGTATAAAAGGGGTTATTTAGGGGGTTA TTGAAAATCCAGATTTTTAATCCGTCTGAGATGAAAGACTTTGCTTCGAT CACTGAAATATTTGTGAAGTCTAATTCAATTGCATGTTATTCTCTAATTA TTAAAACTCAAAGAGTAACCTTTTCATTCTCCATCACTAGCTCCTCTGAT TTCGACTATATTTTCCTTGACTTTAACTGtgttttttctttcccttcAGA GTTATGGTAAATCTTACACGTAACAATGCAGAGTACAAGATTTATGCTCC TGATGTTGATCAGATGCATGTTGTCAACCATACGAATGGTGAAGAAATGA AGGAAACAAGGTATATATACAGAGAATCGCTTGCGATTTTTTATCGATCT TGTGTGATTTTCAgtgattttctttctttacgaagataaattttttgata attttacaaGGGTTACAATAACaacctaaaagtaaaaaaataaaaactac tGAAGAGGTGATGAACCTTGCGATGCAACGCCATTTAACGTTGGCTAAGT TTTAACACGACAATGGCTTTTTTGAGGGCACcaagctttcaaaaaaactg caatcaaagatggcagatatagctTGGGTACAAGCAGAGAGATAACCTCC CTACTTTGTTTTAAATACATCACAAATGAAGCGTTTTCGACAATTTGGTT TGTGGTAAATTCAGTCCGAAAAGAGTGAAGTatgattttctttgaatttt caccaagattaaaaaatgaaaatgttttttgttttgatagttgAATTTTA TATGTAATTTCGTTTACGTAATTCAGACTGATGAACTTTAATTCATTTAT TTTCCATATTTACTTCTTTAGAAATGTTTTCGTTGAGTCAGCAAGAATTG CACGTGGAGCCATTGAAAAATTAGATCAACTAGATTCATCAAAATGTGAT GCTGTTATTTTTCCTGGTGGATTTGGTGCCGCTAAAAATTTGTAGGTTAA TGctcgatatttatttattttccatGAGAGTATGACTTTTGaaccaaata ttttcaaaacaaaagatttccTTGTTGATCAAacctttttaataaaagta tTAATGAATGACTAGTATTCAAAAAagaattgttaaaaaattgataaaaa atgatttcttttcttttaaaaattcagaTCGAATTTCGCTGTGAAGAATG CTGAGTGTACAGTCAATGAACAAGTTGAGAAAGTCATCAAAGATTTTCAC TCATCTAGCAAACCTATTGGGTAATGGTAGTGATAATTATTTCTCTGATC CTTTTCCTAGATCGCTGGTACTGTAATTAACTTGGAAATATGAATAGATT AAAGTTTTACTTTTCCAGGACCAACAGAGCTTGCGTACATTTTCAAAAGG AATATTTCAATATGAGGATATCTAACACCTCGCGCACGGTTAATGTttta ttattctttttttttagacTGTGTTGTATTGCCCCTGTGCTTGCTGCAAG GGTAAGAAGACCTTTGATATTATTCATCACCTTTTTATACCCCagattat taaatatttttttatatttagccTACaaatatggcgcgccaaagcggaaa taaatactatctctttaaaacaatactatcttcgtttaaaacatactatc tttttaaaacatactattttcgtacaaaaaatactattttcgttgaaaaa atactatttccgtttgaaaaaatactattctcgtttaaaacatactatct tcgtttaaaaacatactatcttttgtaatgatactatctttttttaaaca atactatctattttaaaacgatactatcttttttaaaacatactaacttt tcgaaaacagtctggaaacgaggttggcacgtcttgcctcgctcatttta aagtttgcatgcatgaaCCGCGCATGGTGGGACGGCGGGACACCATGCTT GCTGGATGGTCCAATAAGATCAGCAATTTCCTTCCTTTTGAACCCTATTG TTTTTAGTGCAAGGACTTGGTCTTCGTTGATATCTTTCAATGGTCTGCCA CGAGTATCCATTTTACTGTCAGTCAGGTCAGATCTTGTAGGGAGCCGGCC CGGGGGgaggggcagctgggcaaaaggaccgacgggtatgtgcgggtcct aagggtaccttttccaatatgtttaaaatgcactgtaagggtcgaaaaaa ctagagatgcactgtattgtaagggtagaaatttcagaaatttcttgaaa attctcattttttgcacgaaagggatcgaaaatttgggggaaaatgcact cttatgattttcactgatttttgctgcactgtaagggtgcaattttaaaa gccaatttttggcccgcacataccgtcagtccgcaaacccagtgcccccc cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGtaaaaatagtattattttttaaagatactatgttttaaacg aaaatagtattttttaagcaaaaaatagtatgttttaaaaaagatagtat gttttaaaaaaaagatagtatgttttaaacgaagatagtattgttttaaa aagatagtatttatttccgctttggcgcgccatataCAAATATAAATGAT ACAATCATGAGAAAAGTTTGAGATAtttgtttgagatatttgttggacct accccggtggaggtcctataaattaaccgttgtatgttcgttcgttcgtt accagcttttctcgagattggctcattagttttttctgatattttgcaca aagatgcataactataaaccctcgaatgtgacggagcccgattttcgaaa aaaaaattttttaggcaaatttgagccaaaaaacggctaaaaaacgggtt ttttggactttgtgaaaaattggatcattaattttttctgattttttgta tgaaagtagggtaccatcagaggtaaaaaaaattttttggctaaaaaaac gcatatttatctataagaatcactattaataagcatacatcaatgttctt agtcaaattactcaggcacgacggaagctttttatatctggtacggcgaa tgaggaaatttaagcgattttatagcgattttaccgacgaagaggaaaac ttcgggtattttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttgctcatg agggcttacttttgaagaatatgtgtgtttagacatgaaatttaggctgc ttggcgtgtttttatagaaaaactggcctaATTCGATATTTTCTTATAAg tacattatcaattacttaggtattagcttttctcgagattggcgctttca ttctttatgattttttgcacaaagatgcataactataaaccctNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNaaaaaatgtttttgggcaaatttgggccaaaaaacggcta aaaaacgggttttttggactttaaaaaattggatcattaattttttctaa tttttttgaatgtaaataggtaaaagatggctcaagcagatttttgtaaa aaacgaatttttcagctcaaaagacgcatctttatctataagaatcacta ttaataagcatacatcaatgttcttagccaaattactcaatattttgatg agatcgattttttttttgctcacgaagacttgaatatgaaagaatattta tagagcatgaaattttggtttctaaacggttttttatatgaaacaaacga ctaattttaatagatcgtcactatttgtgttctgaatgattgtttaatgg tgtttaaacgtagatatcaattatatatgtgttaaatgcacaaCTAGGTG gttccataaaagtatcacttttttttcttagattttacTTCTAATGATAC TAGAAATTCACCGAGAATCACAAACTAACTGGTCCTTTAATTTAATATAA AACCATCTAAAACCATCTAGTCATTAGATTCAAAATTCACTTATTTTGGC AGACAATACAAGGATGTGAATTAACCATGGGACAAGACGATGAGCAAGGA GGGAAATTTCCTTACGCAGGAGCTTGTGGAGCCGCTACCGCAATGGGTGC TAAACATATCAACAAGAATGTGGATGTATCTTTTCAGTGTGTccgtattt gaaaattttagtttcGATATAGCTTTAGATGAATATTTAACCTAAGTCCA ATGATTGAAAGAACAGTCAGTTTAGGTGAGAAGATGTCTGTATTGCGGAA TGAACTAGTTTGTTTTCTGCTCCCGTGAAAATCGTCAATTAATGTTAGGG TGATTCAGAAAGGTGCTTTGTATAGGCTTACGCCATTTAATTTAAACATC GACATAAATCTTACAGCCTatgcaaaactttcaaaaaattcgaGCTTTTT ATAAAAGCAATAATTTCTTGAAGCTTTATCATCAGTCAGCTCcatacttt ttttaaagttaccATTCAATATTTTCGACAACAGGTTAATCATGTAGGGA TTCTAGGCTACTTCATAAATACCCATGCCACGTTTAAAGCGTAAAATTGC CTGGAGTTGTCTATTGTGTAGAGCAGTTAGGTCCTTGTTCTTTGTAAAAG CTACCGTCGACGAAAAGAAGTTTTAATAGAAAGAGTTTTTCTTTAATATG GTGTTCACGACAACAGGAGGTTCATGTAGATGCCACCAATAAAATAGTGA CAACACCTGCGTACATGTGCGATACTAAAGTTCACGAAATCCATGATGGT GTCGGCAAAATGGTCCAAGAGGTCCTTAAGATGATCAGCTAAAGTCAATA ATTACATCATAGAGAAGTTATGAACCAATCGTAAATGGTCATAAATGCAA AGAGACATGTGAGCCAAACGAAATTTATGGATATAAAGTTTtgggaaaat ttgacaaaaagagataatatttccaatgacttaaaaaaaaacaaggacTA TGGCAATGATACGAAAATGTTCGGTCGCCGTTGCTTCTAAGACCATTTTT AGAATAGTAAATTTTTAGCAGcacctttatttttttgtaaattgaaaaga attagaaaacgtaaataaattgaaaaatgaaaaacaacttAAACGACTTT TTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009192TCONS_00009192Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009192-proteinTCONS_00009192-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:299242..305545 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LOC102724023PREDICTED: ES1 protein homolog, mitochondrial isoform X1 Homo Sapiens
C21orf33ES1 protein homolog, mitochondrial isoform Ia precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
169.74 159.74 104.38 93.93 24.93 20.6 32.06 35.39 39.58 36.34 32.61 32.82 28.12 24.58 47.82 46.45 61.81 57.02 23.51 22.2 36.96 36.78 78.5 72.29 37.78 42.8 61.1 54.86 46.81 45.54