XLOC_005424 (gene) - C. hemisphaerica

Overview
NameXLOC_005424
Unique NameXLOC_005424
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000098:125606..130039+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005424 ID=XLOC_005424|Name=XLOC_005424|organism=Clytia hemisphaerica|type=gene|length=4434bp|location=Sequence derived from alignment at sc0000098:125606..130039+ (Clytia hemisphaerica)
CTCCGATTAAGCGAAGGAAAGATTGTAATAGACTTTCTTTAAGCAGGAGA
CTATCCGGTAAGTaatttgatatttgttttggGAAGTAGTCGAAATGCCG
TCGCCGGAGAATGTCTACCATCTTTATTACAgtgttcaaagtttttcttc
CTCACGCGTGTTTCCGGTCTCAATGAGTCGCAAAAAGTGGTTTTTCCGTT
ACAAAGATCAGTAAAGATTTTAACAATTTCGGCTAGCTGGGAGAAATTTG
CTGTGTAAATCTTAAGTTCCGTCCGACTGAAACGAAAGAGTTTGCTTTGA
CATATGTTTGACGTTTGATTTTCTAGTATTGTGTCTTTTACTCGTTCTCT
CAATGTCAAACTGGAAacttttcgataatttttaaaaCGCTCAACATTTT
ACGTTTGTATTTACCAGCTGGGCACTCTTTTTTATGTTGACTTCATTTGA
TAGATTTTTTAAGGTTCTATGCTCGAGATTAAATCTATGTCATTCCCTTT
CAAGCCCGTTTGGTGCTGAAAAGATTATATTCTTTGTAAACACTTCCTAA
TCAATTGGGCATGCTCGAACTCGAATACTGCTTCTTTAATCTGTATTGCC
AGCAATGTATTGGCCGAAGCCGTAATCGAACGGTGTTTTGTCTGTTATAC
ATTTTATGGCTTGccaataataaatatttttgccaACTCTTTGTCTTCAA
ACGGGGCTTCATACTTTACGCCGGAAAACTGAGACGTAGAAACGGGACCT
AACGCCCAATGAGTTTGAATATTCATGACTATACAAATTATTATGTGAGT
TTGGTAGAAAGGGGTAAACTTAAACTGTACTTAAAATCTTTATTCACCAT
TTTATTTCTGGTCCCCCTTTATCTTTAAAACCTTTGACTCGACGCTTTTT
AGCAtattgattttttcacagaGGTCTTTGAAGGGATGAAAAGACGAGAA
AAGCTCAGAGTCCAAATTCCAAAACTTAGGTATTTTTACGTGCTCTTAAC
TGATAATTGTCTTTTTTGATAAGCTTTGTGATTCACAcgagtttccatgg
caacgtgTGACCGTTATTCCCCTATTTTAATCAAAATACcctttttttaa
tgactttATCATGTCCCCACGTAATAGATTTATGCTTAtcttaactttct
ttttgaTTCGGAGGGTACAAACACACACGAACAATCTAAATATTAATTCA
TTCACTCGTTCGGTTTTTTAATACCACTTCATTAATCTTAAACCTAGtcc
taaacgtttttttataagaacgttcaAGATATTTCTAAAACCTTCGTATG
TTCTCTAATGTTTGAGTTTTAGGTAAAAAATGTGCTcttaaaattcacaa
ttttggtgagaatttttttgcaattttctaaAGAATTCCGTGTTTTAGAG
TCCTGGATGCCTTGGAATGTTTATTAACTTGAAACAAGTATTATTATAAA
TCTAATCACTTAtatattttgtaagaacattttgatCTAAAAATAGTAGG
ACGAATAGTAGAGCGTTGGATTAGGGGagcaaagaattttttttcaaaaa
agcattTGTAATGGGgactttttcaataaaaatttggtctctttaagggt
cggttttcggttTTCATCTGCCAaccctaccccccccccccgggatagaG
TGTCAACTGAACCTGGTCTTATAGAAAATGCACGGGCATGTTTTAGATTG
TTTAATGAACTCGGACCTTAGGTTAAATTTGAAGTCTCTCTTATACGTTT
TAATACATATCTTGTTGTCAATGATAAAAGGATTCTtgaaaattcagtga
aaaatgacTGAACTTAACGTTCTTAATGGATctttatcggagtttttgat
ttttctaaaaaggcgATGCATTGTGGGGTTGTTTcaggagtattacaata
gaaatctcttaggaattcctcatccgaaacaatcccacaatgcatcactt
tttagaaaaatcaaaaactcagtAACGTAGTCTTATAAGAAATACACGGG
CATGTTTTAAATTGATTAATAGACGCGGACCTACCCTTCATTCAAAAAAG
CAAACGTTTTTTTAATTGACGTCAAGAGAGGTTTAATGACACCAGCATTC
ATTAATTAAGAGATGCTTCTCATTATCTCAACTATTGTATAAAATGAACT
AATGTTCTCATTAACAGACAACAAGAAATTTATTTCTGATTAAGCTGTTG
AGCTGTTAAGACGTGTTCCTTTTaaagatttgaatattttgtCAACGCAA
CGCTTTCTTCATGGTTTTAGGCTACCACTCCACCGACCAAGTTTTCCGCG
ATACATTCgtcaaattgaatttcaattcgCCACACCATCGCTCATGTGAC
GACTTACTGACGACAACCAAAACGAAAAACGACGATACATCGTCAACGAC
GACTAAATTTAACCGAAGATTACGACGAAAACAGAATCGACGGAGTGACG
AGACTATTGATTGTAATCCGTTATTGAATAATAATTACATGACCAAAGAT
CCAGCCATGAGTCCGATAAACCTAATCggaatcaaaacaacaaacgGGCA
ACATTTTCAAGAACCACATTACGAAGCCATTAAAGATCTGTCAATCAAAG
CCGCGTTCCGTATTAACAGCAATAACTCAACACCCGAAGGTTCCCCGAAG
TTATTCCATAACCGGAAATACGTTTTAAATAACGACGATAAATTGGCGGA
AAAAATTAGTCCGTTGTTGGAGCGGAAGAAGAAATTGAGTGGGAAGGGAG
TCAAAAATCCACCACTCCCCAAACGTAACACGTCATCTTCTACGCATCAT
TTAGCAGACGACGGCGTTACTGAAGTTACGGCAAATCCAATTTATGGGAA
CACGCTAACGTACGTAAACAGTGCTTCAGAACCGTGTTACACTGATGTTA
CGTTTCATAATAAGAAAAATTCTGTTACGAACTCTCCGCAATTAACGGTT
AAAGTTGATCATCCGTATTCCGAAATCATTCCTCGCCCGAGACGTTCGGC
AACTTCTTCCGATAACGATACATCGCCGAATATGTCTCCCGACCGTGTTA
TGGGCTCGCCCTTCAGTAGTCGTCGTTCATTCAAACTTACTGCAAATCTC
ATTGATGGATCAAAAAGCGATGGTGATCTCTCGGATAGTGATATCCTCGA
CATTCCTCGGCTCTACGATCGTCGTCGGAGCCGTACCGGAAATGGAGCCG
AGCTTGCAGACCCATCTCGTTTTTATGAAACACCCGACCAACAAAAACCT
CGTCGTGTTAAACAAAACTACCGAGGTAAAACTTACGAAAAAGACTACGT
TGAAACGATTATCAAACCACGACCAAACATAAAAAACTCGGTACAACCGA
CAACTACCGAATCAACATACGAAAACAATGTTTGTTTATTAATGAACCAA
TCAACTTCCTCGGATGATGAACCAACGTACGAGAATCCTGATTTACCGAG
AATTTTAACATTTGAAACCGAGGCTCAACCGACTTACGAGAATAATGAAC
TATTAAACGACGAAGCGCCGAACGGTTACGCGTGTATTCGGCAAACTTCG
GTAAGCACGTCATCGGACGCTTCAGACTCTAACTACAATAACATTTGTTT
CTCGAGCCGCCAAGATCAACTACAATACGCCCATATCGATTTACACCCTC
AACACCCACTATACGATAATCTCACATCGAGTGAACTCGATAAAGATACG
GCTAATTCGATTCATTCTCGATTGTATTCGGTAACTAAGAACTCGAAATA
TACTgaaattgactttcaaaaatcaGACGGTTTAAAGGAAGCGCTTAACC
AGTTGAGAGCTGGGGAGAGCGCGACAACACCCGAATTAAACGCCGAATAC
AAAATTGACTTGTCACATATTAAATTCTCTCGAAGTTCAGAATCGAAacg
aaattcaaagaatttggaatgaattttttgatactatttatttaactttt
gttttgacttttttttcacTTGGTTGTGCTTTAGTCTAGATTTATctgtt
tttgaaatgttttcgcaTCTTTTACAATTCTGGATCTTAAATAATAagaa
tgattttcttttcttgaatttattttttgcgggaaaataaaaaacttttg
aaaaggccGTCTGTTATTGTTGGTTGTACAAGAAAatgattttgtatttt
attgttttaaataaaattttagaaattattCTTATTGAGAGATTAGATAA
CGAAGAAACAATTTTGTTAGttataaaaattttgagaatttgacattttt
ctaGAAGAAATTTTATACATAGcttgatttttgtatttttcatacttttt
tgtGCTTATTTTGTTTCgtaaatgtattttttattgGCTGGCCATGtaga
aaatttatgaaattttaaatttcaataaaattatatataaattattttaa
atttctatTCGTATTTTATTTCACTTTATCTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009699TCONS_00009699Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009699-proteinTCONS_00009699-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:125606..130039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.12	2.3	9.24	10	2.77	2.14	4.42	4.89	2.04	4.08	3.66	0.96	89.37	101.85	92.61	68.71	29.42	46.66	90.75	62	11.35	13.72	12.15	13.87	10.2	11.23	137.24	154.8	17.67	20.43