XLOC_005434 (gene) - C. hemisphaerica

Overview
NameXLOC_005434
Unique NameXLOC_005434
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000098:520508..525494+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005434 ID=XLOC_005434|Name=XLOC_005434|organism=Clytia hemisphaerica|type=gene|length=4987bp|location=Sequence derived from alignment at sc0000098:520508..525494+ (Clytia hemisphaerica)
ctgcgattgcaccttttggcttcaaaagattacgtcataaaaatgtaccG CGCGCTCgacaaaaaagttgaacttcaaccgttacgtcagatcgcgccaa tggagttggttcatttttcttttgaccaataaatagcgtggaagctttgc tcgaaaaagtgtgATCGAAGCGTGCGCAAGCGGCCTTTATAGTACTTTga gttttgtagaggtctgtgattcacACTATTGTTCCTCCACCTAGGATTAC TATGAAacccctcttctcacagacccactggaaacccttcccactggaaa aatgagccaaaatatcgtccccggtggaaaattatcctccaatttttgtc ccaactgaaaataatcaaataaccATTCCTGTCATTCctaactgcaaaat atttactatttttcccattcccactggattttctgacttgacatgaaatc aaaagaattgaaatcctcattcataaaaactttgtaaatatcaatcccca tcgagtttagTCCgctatttttatccccactggctgaaaaaatcttaccg ggtctgtgagaaggggatctTATGAAGTTTCATTAAGATcttcaaaaagg aaaattaccaagaaatatcatatttcatcgAATAATCAAATATGTTAAAA CTGAAAAGTGAAGTCGTCAGCAAATTTGACTACGGAAAAATACCACAGTG TAAATATCACAGCATAACAtgagaaagatttttgaaaccaTTGATCTAGA AAGATGTGTAATACAATTCGAACTGACTATTTAGGTAAAGGtaaacaaaa tgtcaaaaattctgagaaatggattttcagaattttcccgattttttctT ACTTTATGTTGTTATTATTAAAATGCTGTTCGAGTAAGCAAAAAGGTAAG GATTATTATACatcatcattggtaaaagatgacTCGTAAGGCCATCATAT GACATGAGGACATGAGTTAAAAGGGTTTTTACGAACGAAACGCTGGGGCT TTCCCTATTTGAGGTTTTTTAAATTATTctaaatttgcaaattttatata aaaagagaaattcgaAGTCTTAGATTCAATTCGTAAATTAATTTGATTCG AAAAAGtattctgaatagacgaaagcTGCTAACTTATAATTTTCTACGTC TTGTACAATGACTTGTTCTTGTAAAGCTCTAATCACGCTTACCTTTGTTT TATCTTTATGGACCTATGCACACtgtaaaaatattcaaagacaGGAAGTG TGTTCAAAGGCTAATATTAAATTGCGAACTTTGAGAGAACGTTTCACAGA TAAAGTGCGTGATGCATGGCTTCCAGCTGCAAAGGTAAATGTTCTTTGCA TATGATACTGTTCACGGCCTGTACGATCAACAATCCAAAAGGTTACTCAT CAACCAaactagacgatgttatcgtccctTACAAtaatagtaaaggcggg aaaatatggcggtatgatggcgttatggcggtatacggaaaaagaTCGGC GGGAAGGTTTCGAAGAAGACTGGTAACTctaccggctgtaaactcttttc ggcaaaatacccgtttgtgaattttcttcggcttcgggcttttttcttag atagtgatttgtcttagactatagcatagtctacaaCCAAACCcgccaaa ataacaaaatttcgGAAGATGCTGCGGCACAGCCAATTtggaaatgtttt catttgattGTTGAATACGAACTTTTGGATTGCTAACCGTACCTACTATA Cacgtttctttataagcacatttaacatttttgaagccttcggatgttct taactttttgaattttaagcctaaaattgttcttaacatgatCTTATTTA CCCACTTTCTGATCTGTTTTGTTgcttttcttaagaaattggctgtttta gaatccgcaaagccttaaaatgttcttaaaaacttgttcttaacattttg gccatcgaagtcctatgttcttatatagttggttctaataaaaaaacgtg tgcaGCCCCAAAACATCAAGAAACATCATGTATGCCAGTTACATAATCAT GACTGCCACGGGTACAAGTTGTTGGAATTATAGCATAGCAATTGCAGGGC CAGGTGCAGaatttatataatatatactTGTTTTATCTACCCCAAAATAA CGATGCGATATATATCTATATGCCATAGAGTCGATGCCACAATATTTTCT TATAACTGCTAGAACGGTGTAATCGAACACTtctataaaataaacaaaag cacAGAATATCTCTGGAAGGAATTTTTAGATCATTTACTGATTGTATGAC TAAGAAAATTTGACTTTGAGATGCAATAAAAGTCAAATAGTAACGGTCGG ATTGGAACTTTTAATGTTTTAACATTTATCCAAGTTTTCTTTGTTGGGAC CTTTCAAATGAATCTTGAAGTCAGAAATATAAGGACAAAGGTTTTTTTCG GTTTTCATGAATCATGGTGGTCTTATTTCATCATTAGTTCGTCAAATATT TTCCAGCGGGGAAATTTTTACAATATGAAGGGAAAATTACCTTGAATgta actttttatgaagtttgAGAAAAACATTACCTCAGGAATAATTGCTGTTA GTTTACTTTttacctttaaaattttttttttttttacagattaGCAATAT CGACAGTAACGAAGCAAACATTCATTTTACGAGTGCTTTGAATTACCCTT CCAACGAGTTTCCTGTCCGTACTTTAATCGTAAGTTGTAATGTTTTAAGC ACAAGCGTCAGTAACTCAGTACCGATAGGNTAAGGTATATCTACACTCTG TTTACACCACCCCTGTATCACTGATTCAGTATACCTCACGGAAAGAAATT TATAcggtatttaatttcgcggctcacagctcaaaattcggaAGTTTCGC TGAATTAAATTTACAAAAGAATTCCTTTAACAAAAACAAGTGGGTCGAGC CAATTTGACTGTATCAAGTTATTATTCACCTTAATGAACTTTGGTTATTC TGCTGGAAGGTACAATCTCGGTCAAGatatattgggaattttggttaatt cctcgttttcagcaatttaaagATCGGATGATATAGTCGCTTTTGGTcaa attgataaatttcttCGAATATTTCatttcgggaggggtttatagacttc caggctatattctgagccctactggaccattatTGGGCTTTTAGTTCCTC AAATCCTAAAGTCCTAAGTGTTAAGTCTatcgttaaaactctacccgtcc aacctaatttagagcgcttccaaattgtttgtggttttaagatttcgtgg gaatttccctgtTTTCttaaatattatgactttgattgtataTCTAAGGT TTTAAAGAATTCTATTTTGTTTTANtcatagttcagctagtgcactgtaa gggtaggaaattacaaaactgcactgaactgcactgtaagggtaggaaat tgtgataaaaggccaatcttacttacgggcgagaaattttgaaaaagtgc actgtagcCAAATTTTGGCCGAaggtatggtcgttttcagatcgagtgcc cccccgggttaatttcttaaaaagagtcagtgatagaggaTCATAACatg aagtctgtctattatttcttctttgtggagcaagattggtcagaaagagg aaaagaaaagcatttttatGCTTATATATCAGCACAAtttaacaataggc agacacaaaaacataaaaggggggggggtcgaaaaaatggaaaataaccc CCCTCCTTCAATAAAGCACATAAGAGTAGCGATGCATCATTTAACAGGTC CTAATAAAAAGTTCAAATCCAGTATAGAAATAAGCTTTAACatgattttc atctttttttaatttccagACTCCTGACATGCTTGAAATCTATCTCAACG CATTCACAGCTTTAAACACCATTTTCAATAAATGTGCAAGGAAAACTACT GACTCGACCATCAAAGCTACGCTCAATAAGTTGGTTCACCATATTGCTAC TGTGATGAATGAAATCGACATTGCTATTAAGGTATATCTACACTCTGTTT ACACCACCCCTGTATCACTGATTCAGTATACCTCACGGAAAGAAATTTAT AcggtatttaatttcgcggctcacagctcaaaattcggaAGTTTCGCTGA ATTAAATTTACAAAAGAATTCCTTTAACAAAAACAAGTGGGTCGAGCCAA TTTGACTGTATCAAGTTATTATTCACCTTAATGAACTTTGGTTATTCTGC TGGAAGGTACAATCTCGGTCAAGatatattgggaattttggttaattcct cgttttcagcaatttaaagATCGGATGATATAGTCGCTTTTGGTcaaatt gataaatttcttCGAATATTTCatttcgggaggggtttatagacttccag gctatattctgagccctactggaccattatTGGGCTTTTAGTTCCTCAAA TCCTAAAGTCCTAAGTGTTAAGTCTatcgttaaaactctacccgtccaac ctaatttagagcgcttccaaattgtttgtggttttaagatttcgtgggaa tttccctgtTTTCttaaatattatgactttgattgtataTCTAAGGTTTT AAAGAattctattttgttttattttttaggaatacaaaaagtgtttgaaa taccaaaaaagacAAGACTTACTAAAGTTCATTCCCCAACCTCAGAAAGC CAACAATTTTGTTCAACTCAAAAGACAACTAAAAGAAAAGTCGTCAAAAA ACCATTCTGACCATCAACAACTTATTaataaaatcatcaaaattaccATT TTTGATATGGACAATATTACCGAGAAGTTTATCCAAGAACTTGACATCAA GCTGTTGGACTTGTAGTAATTACAATGTTGCCAACTTTGGAAATgcagca aaaagaaattttgttttaagaTTCTCAGAGTATCTAGACTATTCAATCTT GTACCCAAAGCCACTTGCATcgcttttttaattttac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009719TCONS_00009719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009719-proteinTCONS_00009719-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:520508..525494 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.82 0.72 0.8 0.45 0.75 0.44 1.43 1.31 0.66 1.31 1.23 0.63 1.16 0.81 0.81 1.23 1.26 2.12 0.98 1.06 1.41 1.88 0.48 0.77 1.31 1.42 1.26 1.12 2.81 2.31