XLOC_005575 (gene) - C. hemisphaerica

Overview
NameXLOC_005575
Unique NameXLOC_005575
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000100:557373..561837-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005575 ID=XLOC_005575|Name=XLOC_005575|organism=Clytia hemisphaerica|type=gene|length=4465bp|location=Sequence derived from alignment at sc0000100:557373..561837- (Clytia hemisphaerica)
AGGCAAATCAGAATCTAATTTAGATGAAGTAATTGAAACGCTTCAAAAGA
AAAATATGGTTAACGATAAAACAGCTTTGTGCACGAAGAAGGCAACGGAG
ATACTGTTTGACATTGCAAAATATGAGAATTCAGATGATGCAAATTTCTA
TTCTACACGGTATGCCTATTAAATCACCTGAACAATTCAAGAGGATTTGC
TACATGCCTTTTTATAAGAATACAGTTTATAAGAATATTCATGATGAAAT
TTGTTTAAAAAAATTAAGAATAATATGGGATAAAGTTTCCGCGGTGCTAG
TAATGCGTATTTCAACTAACAACATGCTTACTTGGTTGTACACAAAATTG
TAAAAATATTCTCTCCCAACAGTGTCATTTTTAAAGCATTTTTATCTGTA
AATTGCCAATTACAACCCCGGAGGCTCAAAACTTTCACGAAAATGTCATT
TTTTTGCTTCGGATATGCATTACATGTTAAAAATTTAGGTTCAATTTTAA
TCCTAATCTAAGAAATATTTTAGAATGATTTTCCCCAAATAGTTAAGAAT
ATCCACGATGAAATGGAAAAACACCATTCTTATAAAAAAAGTTTAGTAAT
AAAGGGGACCTACATATATATTTTTTTGGGATGGGGTGGCATTTACTGTA
GCCTTTTCCTTCCATTACATCTCTCATACATGTGCATTTATTTCATTAAG
GGGGTAGTCATATGAGATTTTGAAAATTGGTGAAAAAATTATCAATTTCG
GGATTTAGGGCTTTTTAGAATCCTTTATCCTTCCTGAACATACCCTGAAA
ATTTCAAGGCCGTAGCATAAATATCTGCCGATATATTGGGTTTCTTATGA
GCCCTGATATACAATTTTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTGGAGATTCCCGGAGCACGTGAAAGGCCATTTTTTTCAAAAAACTTGGA
CTATTTTAGTATTTCCAGTACCTTTTCAACATTAAAAGTTATGTATCAAT
CCATTTTGGTCAACCACAGTAAAAATTTTGTAAAACGGTCAATGTATCGC
AGAAAAATTGAGAAAAACCTCTATTTTCAACTTTCTGCGCCGTTTTCTCA
AAACACGTTTTAGGGGGTTTTCGCGCGGTTAGTGTAAAACGCAGGTCACA
GGTCACAGGTCAACAAAGTGCAGACCGGAAAAAAAGATAATAAGATCATA
ACATAAAATCAATACATAACTCATTAAATTACAAAAAAGTAATACATGTT
ATTTAGATTATAAAATGACAATTGAATAGAATAACAACCTAGTGACACTT
ACTTACAAAAATAATGACAAAATCATAAAATATGATGCCTAACAAGACAA
AAGCACGAAAAATATTTATTATACAAAATGTGATGTGGATGGTGTGAATG
GATAAAAAATGGCACCAAAACAGAAGCTTGCATGGNTGTGTTTTCCAAAC
ATTTTCCTCTGCAATGACATTGATTAGAGTCAACCTGTCATCACTGACCT
GTGACCTGTGACCTGCGACCTGTGACCTATGACCTGCGTTTTACACTAAC
CGGTTTTCGCGCACCTTGTCAGCCTTTTCTCAGGATTGAGAAAAGCTATT
GACTTGAAATTTTCAGGGTAGTTTTCCATTATGGTAAGCTTCAGGATGAA
TGAAGCAGTTTTTCAAAAAAATCATTTTTTGACTTTTAAACTGAAAAAGT
ACAAATTTTAGGTTCCAGACCCCCTGGCTTGAAATTTTGAAANNNNNNNN
NNNNNNNNNNNNNCTGGTCACACTTTCTTAAAGAAAGCGCAACTTCTGAA
ATTTGGTTTTTATTTTAGTAAGTGAGGACAGCGCTAAATTCGAATTTCCC
ACTGTAAATTTTTTGAGTCCAAAATCGGACTCACAGCTCTGACCCGTCAA
GTATTCATCAGATTTAAAAAAAATACGCAGACGGGTTCCTGTCTAGCATG
GTCCCTAAGAGAGTGGTTTAAGGATGGAACTAATTAATTATTCAGTTATT
ATTTTAACGTCTTAATGACAATTTTTGACAAAAATATTAACATAATCATA
AAATCTGATGCAAGAAAAGACAAACACACGAAAAATATTTATAATACAGA
ATGTGATGTTGATAGTGTGAATGGATATAAAACGGCACCAATCAGAAGCT
TGTGAGGTCCCTAAGAGAGTGGTTTTAGAAGGATANNNNNNNNNNNNATA
AAACTAATTAATCATTCAATTGTTATTTTAATGACTTAATGACAATTTTT
GACAAAAATATTGACAGAATCACAAAATATCATGTCTTACAAGAGAAAAA
CAACAAAAATATTTAGCATACCGAATATGATGATGACAATATGGCTGGAT
ATAAAATTACACCAATCAGAAGCTCGTGAGTTCTCTGAGAAGGTAGTTTT
AGAGCGATGTGTTTTATTATATGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTGTGGAAAGTTTCA
TTGAAAAATATTTACTACTTCACAAGATATAACAAAAAGTTTAAAAAATG
ACATTTCAAATTTCTCATATGACTACCCCCTTAAAGTAATTTTCTTTAAT
TGGGAGCATAATCAAATTATTTATTGAATTTGTCTGATTTTAGTCAAATT
GCCATGGGCTTGCTGGAAAAAAAGTTTAAACGAAGTGCCAGTGAATCCAA
CTTAACGAGGTAAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009945TCONS_00009945Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:557373..561837 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.12	0	3.53	1.15	2.8	2.22	9.35	3.75	5.26	11.94	0	5.54	10.37	7.9	8.85	20.27	5.46	12.8	12.15	10.41	4.02	5.88	9.53	10.84	0	0	7.13	6.08	6.92	17.63