XLOC_005612 (gene) - C. hemisphaerica

Overview
NameXLOC_005612
Unique NameXLOC_005612
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:88162..91166-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005612 ID=XLOC_005612|Name=XLOC_005612|organism=Clytia hemisphaerica|type=gene|length=3005bp|location=Sequence derived from alignment at sc0000101:88162..91166- (Clytia hemisphaerica)
AGAAATTTTGGAAATAAACAGCTTGGAAAAGACAGACCGAACAGCAGGTG
AGTGCATATTTAAATCTAGATAACACTTTAAAGTTGGATAAAAATTGGAT
ATCTATCCATCGTATTAGACATAGAAACTTTGAGTTATGTTTGAGAATAT
TTGAACAGCCCATTAGTTGAAAATTCACAATAGAAAGTTGCCATTTAAAA
GCTGGATTGACATTAATGCTTTACTAGTAAAGGGCATACCTAACTTAGCC
ATTCATTGTTTTCATTTTGGTATTACTGGTTCTCCTTGATGGAGTTGCTT
GCGTTCAGTTCTATGAAATCGAGAACCTGTGTTTGTTTTATATAAAATTA
CATTATCCTCCCTTTCTTTATAAGTAACATACATGTAGTTATATTCTATT
TTCTGAGTAATAGTAGTAACCAAAAATTGTGTACTTCCTTTCTATGTTGA
AGAAGATGAAGGAGAAGCTGGGACCTCTACGCTGGCTGACTCAACAAAAC
AGCAAAACCTATCTAATGATTCAGAGAAACGACTGATACAATCTTGCCTG
GATACAACAATTAATAAAAGATCGGAGCAGACACAGCCTAATGATCCAAC
ATCAATGCAAACAAAAATGCAAGCTGATATAGATGAAATCAAGAAAATGT
TAGCAGACATGTATGTCACAAGTACCAAAACAAAAACATTGATTACGTCG
AGTGACTCAAAAATAAAAGAAGCAAATAACCTCTTAGAGCTGTCAGTGGA
GCCTGATATAAAAGTCGAAATCAACGAAAATGGCTGCATGGTACAGTGTC
TTGTGTGTAACGCCTTGCAACAGTCAAGTTACTTAAAAAAAGTCACGTAA
GTACTTTTTATACTCGACATTGAAATGATTGTTAATCAGCGAGGGAGAGA
GGAAGAGAGTTTCACAATGTCCACGGATGTACATCGTTTCAAATCGTTAC
CTATGTTTTCAAAAATTGCCCTGAAACCGACTTTTGTTGTAATAGGAACT
TCCAAACTGTTACCTTATTTGATTTTGTATCGTCTTACAGTTTTATTTAC
AAATCTGGAACACCAAATATATGTGAAGAAATTCAAAGAATTTCTGTCCA
ACTATCTTCTATCAGGAGATTTGGGTGGCAGAACAGATGTATGCATTTCG
TCCTTATTAGGACTCGTCAGCACTGTATACTCTAAAAGCTACTTTATGCT
CTTCTCTATAGGTCAGCTCTTTCAACAAATTTGGGAAATGGTTTAATCTA
TGACCAAGAACAGACGAAATTGCTTCTAGCCGGAAAGTGCCAACAATGGT
ACAGTTTTAAAAGCAATCTCATTTCACATTTCTCATGCACGTCGGGGAAA
GATGATGGAAGTTTTCACTTCAAAGCAAAGAGGTTCCACCTCAAGAATCA
AAAGCAGAAAACTATTCAAATGAACGCCATGGAAAATATCGTCAGTACTG
CCATCGCTGTCTGCAAAATAAAATCTGCAGCATTGTCCTTCGAAGCCCTT
CTAGGACTCGTTTCAATGTGTGGGGGAGACATTGGAAACATTGGTCACGG
GAGGTAGAAAATCAAATTTTTGTATCAAGATTTTTCTATTTCTTTAGCCT
GAAAATTCAGGTTTGGAGAATACTAATACAATTATTGGAAAATAGACCAT
ACCAATTTATTGCTAGTAGGAGATCACTTGCTTATTTTCATAAACAATAG
TCTTATGTCTATATTCTATAGTAGCTCTTAAAGAAAATTTTATGGTACAG
GACGCTTCCTAGCCCCTCCATTTAACAAGCTGTTATAAACAAGTCTCGAT
TACTCGAACTCTCCTTATTTTGAACGAATTTGCATTCCCCGTGCACTTTT
GAGTAATGAAGACTCCAATGTAGTTCAAAGGAATTGGTTTTTGTATTAAG
TAAATAAGTAAATCCATTTTTGTATAAAAGTATAAATTTGTAACTGTTAA
TTGATTTACTGACTTTACATTTCTTCTATCTACAGAAATCAATTTCCTGA
GATAATAAATGCAGCCTATCACTACCTTATGGAAAAAACAAAAGTTTATC
TTACAACTCCTCTCCCTTCAACTGGTTTGTTTCCGCATGTATCTGTTACC
TCAGATAAATCAACTCCTGGCAGAAAAACGAATCATGCAGTTATGATTAT
TTTACCTTTCCATGGAAAGCGGATTGCTATGCCTCTGGATGCTCCACTTG
TCTACGAAATGGATGAGAACAAAACATTGAAAGGAGGTACTGGAGAAGAC
TTAGCAGATCAAGTTGTAGACTGTCTGAAAGGCCGCCTTGGTTTTGATTC
GAAACAACTTCATTATGTTAGAGGTGAATACATTCATTATCTGTAAAATA
AATTAATGAAATTCTTATTGTACATTCGACAAATATAGAAACATGAAACT
CTAAATTAGGTATTCATTTTAGTTTGTTTGATGGAATGATAGATAACTTT
TCAAGACAACACAGATTTGTCCAACCTTGATCAATGAAAACTGTATCTCA
ATGTCCGTTTAGGCCGCTAAGACTAATCCCTGATCATAACAGAACCTCAT
TACAAGGAGTTTTATTCAATGCTAAATTATGTTTGATTAGTCCGAACAAA
AGGTTTATCTGTATTTTTCTATATTTTATAGCTTTTCATGCTGATGGTCA
GTACCAGTCAAATACATTTCAAAGGAAGTTCAAATCTAATGTAGATTCAG
ATGAATACGTTCTCCTTCCATGGGACACGTCTCATTGGATGGATTTGGCG
ATGGAAAGCTTGAGAGAGTCGTCAAAGTCATCTGAATTTCTCAAGAGGCT
CATCAGCAGATCCAATCGCTTCAACACTTTTTTTCGGAGTGGCAAAGGAC
ACGAGGAGTACCAAGGACTATCAGAATCACTTGGATTAAAGTCATTGGAA
GTTGTAAGCTTTTCGACAACACGCTTTTTTTCGTCAGCCTTTGAACAATG
GGAAAAAATCTTCATTTCTTATCCAGCTCTCATTGAAACGTACAATCGAT
TCCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010003TCONS_00010003Clytia hemisphaericatranscript
TCONS_00010002TCONS_00010002Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010002-proteinTCONS_00010002-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:88162..91166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23	0.43	1.38	2.6	0.38	0.47	0.57	0.4	0.13	0.15	0.3	0.13	0.3	0.1	0.32	0.22	0.15	0.11	0	0.2	0.27	0.33	0.38	0.15	0.61	0.87	0.1	0.08	0.38	0.17