XLOC_005645 (gene) - C. hemisphaerica

Overview
NameXLOC_005645
Unique NameXLOC_005645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000102:124359..132823+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005645 ID=XLOC_005645|Name=XLOC_005645|organism=Clytia hemisphaerica|type=gene|length=8465bp|location=Sequence derived from alignment at sc0000102:124359..132823+ (Clytia hemisphaerica)
CGAAAATATAATCTTGTTTGTATGCTGAGGTAAGAGTTTTCTTTTTCCTG AAAtcttgagtctggatacccaggctagaaAATGCATTGTAAGTAATTAG TTAAACTTCTGTGTCTGATTGTTTGTAGTCCTTCAGCAGTGGTTaaaatt atgaattttaccaacaagttaggcggtcatcgaaaaaatgctctgttcgc gtcgcaacgggtgttaaaaatacatgcgggcggacgggcggtcgAAAAAA TTCCCGGGTTTTTTAAAATCACGCCAGTAATTCTAGGGAGGGTGGTAAcg caaacaaaacaatttttctatGGCCGCCAGAGAgcgattgagaaaaaagc tatactttaaaagaacaaattgttTTTCCCGGATTTTTTTCCGcgtctcc gcaccggaaaatcagcaaaaaatatgatacgggcgggtgacgcgaataga acaatttttcgatggccgcctTACTGTGTATAGTAGGTCAAAgaagattt ggctgaaaatttacACCGAGCACAAGTGGTTAGGTCAGGGGTCAGCTTGG TAAAATCTGTGTGTTTTCATTTCAAGAAATGAAGCATGAGTCACCGATGA CCCAAGCGCATTATTGACTATTATACCCAGAATGCGGCATGCAAacacag gaccctgccgacgcaccggacttaacgaacaccggacacgtgaaagtccg gtgtaaaatgaaattctttttaccactggacaatttctacaccggactta aggaagtcggatgtccggtgtcggagaaggatattttttcccacgggaca atcaaaacaccggacatgaccagtccggtgcgtccggtgtttcttaattt tttgtttcataaatgtccggcgtccaaaattccctgtatgcaacaccgga ctgacaccggacttattacatccggtgtagcgaaaggatactttaaGCAC TTTAAGCTGAAGTCCCGGAAAAGCGggataaaaataagttttttgcagtt ttcaaaaaaacgccacatagaagatctttcaaattcagtatgagaataga gcagtaaaaaatacaacttttctatttttcctttttttttgcaaaagttc tagaNAAAAAAAcaccacatagaagatctttcaaattcagtatgtgaata aagcagtaaaaaatacaacttttctatttttccttttttgcaaaagttct agaaatgaaaataaaaggataatgataattgaatactatccactgatgat ccgaggcgccatcgtaaagctagaatcgcttcccGTACTCttggcttgag aaaatgatcaacagattaaatttttcaccTGCGCGGGAGTTCGTGGGCGT TCTGCGAGCGGTCTGCAAGCGTTCCCTCGGaccgtgttaaaaatggtaca ctcagctgtgacagatcatttcgatggaagttgttggaatgtttacaaga ctcttgacagaaaatcgtttgttttattgtcaatgatgacagtgccgtta ttaattttgttagatctggtatattgatgtttgtaagtgcactttatagt tttaattcccattgaagaatcatattccgattttattttctatttaatAA TTCATAGAAGGTTTTACAAAACCTATtctcttgaatataaaaaaaaaata atggcGACAGTATGATATCCATCCATCAGTATAACAGTGTTTTCATCCAG CATTGGCATTTGGCTGCTGGCTACTCATGGCTTATAAGCAGGTTCTAGGT GGGCCCCTAAGAATTTAGGTGATTCCTAGAATTTAGGTGGCCCCTAATGG AAAAATAAGTGTGCTTTAATCTCATTGTTAAGCAAAATTGAATGCAACAT AAGCCTGTCGACAAAGATCATAAAAGATATTACCATCTCCCTGAGACAGA ACTTTtattaaatgtgaaaaaaatgtactgggtgcaccaaaaaaaagtat acctAGGTTTGTCCAGATATTGtaagcttcaggatttaaattttttgttc attctttttttattgtatagaggggGGGGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNgtcaccgaaaattcctttgaaattcaatatttttgtcaaaaattc cgcaaattttgaatatcttttaccaattccgaaattccgcaaatttctTT GCTAAATTCCGATtatccgcactaaaattgtctaattttccgtctccatc agggaacccaatttccgtaatgtcgtctaaatttttgccaaatgccgcca ctccgtccgaaaaaagggccgactccgctcctccgccaaccatgaaccaT GAACTATAGAGGATgctttaacttgaattttgagctattatgcattaaat ttgaaaaagcagttcaaaagttatttccaaactaactttttttccatgtc caaatttcaaaaaatcattaaaaacagcaatcacgctataaataagacaa aatgacaaaaaaacaattccattgtttcttttattctttttcctcttatc ttatattttgccaacagtttgcccatcttatttgcaggtcatgaacattt ccaacaccatcaaactcaatgcagacccaagttctttgaacaactagtcg aggaatggtgatctattttttcaataattttctcacatagcataatttca aaaccttggggatttcccaaaaaaaatttcagcttttccaaaaatattat cttacatgggaatagcttgttttaccatattcttaaattccgtgacaagt tttgatgaacacagttgcattttttggtatttttatgtgtaaacaaggta agtgtcaagagaaaagtttgctcgctgtttttgatggttttttgaagttt caacattaaaaaaaagtcagtttttttaaaataattttcgaactacgttt tcaaatttaatgtataatagctcaaaattcaagttagagcatcctctaga tacaataaaaaaagaatgaacaaaaaaattaaatcctgaagctcacaata tctcgacaaagttgtatacttttttttggtacaCCTATATGTAATGAAAT ctataaaatggacaaaattttgtGCCACAGGCTAAAAGTTTTGCTATTCT AAATTCGCTGTGACCGAATTAACACAATAATTTAGAATTCAGCCCCcatt tttgtttgaataaaTGTAGGTGACCCCTAACTGTGTTGGGGGTTAAAGCT ATTTTGAAGTACCATTTGTTGTTGAACCTTTTAGCCCCCCCTCTGCGGCC AGGGGGGGCTGAAGCTATGCTACTACAGTGCACAGGAAAAAATCGTTAAA TTAAAACCCGTGTGAAAACTGATTTCCCAGGGTGGGACTTGGTTCGTGTT TCACATGGGTGTAAAATCGTAAATAACACCCTTAGTGTTTACATCATATT GAATTGAGTATCAGActaaaaaatacatcaaatttaAGAAGAATTAAAGT CAAATTGTgcagatgttttttttataagcatatatacAAAAATCCggaaa caggctcagagatgcttaggtcaaaagcttaataaggctgaaaaaatgct taagggatgcttatatccaaagcaaaaatttagggaaatactaaAAATCC ATagaattccagccaaaaaaagcaaaaatcaggaaaaatattttttcgtt gGCTCAAGTAACGCTTGCCATATGTTAAATTTTTCCCCaaatctgagcct agatatgcttacaagtgcaatgcttataaaaaaaatatgtagttTTAATA ATTGATTTAACAAGGTGTATATACCCcattattgtatttttttattcttc gctaaataacaaaattagctcggaaattttttatttcagacaTGATTTTG TTAATTATAATGGGTTTGGATATAAAACTTTGTGAATTCAGCATAAGTTT CtgatataattttttctttaaatttatgTATATATCAGTAACCTATTTTA Atacttaaaaagctttaatgaatttcaaaatatagttggtaaatatatta tatattaaaCAATCAGAATGCTCCTGACTAAGGTAGTGAAAATGCATCGA AGAGATGCTACTCGTAAATCATCCAACTGGGCTGTATCGGTTATGAACTT TCTTCAAGGCAAGAAAGAAGTAAAGATCAGACAAATAGGTGATCCTGTTT TACGGGAACTTGCAAAACCAGTTGAACAGGCAGCGTTTGTTACCCCAGAG TTCAAATACATTGTTGATGAACTAGTTTCTATGATGCGAAAATCTAACGG AGCTGGAATCTGTGCTCCTCAAATTGGCATTTCATTACAAATTATAGCAT TTGAGGTGACAGGACACGATATTAAATTAGCTATGGATAAATATGGTAGT AAAGGTATTTCTAAAATGCAAATGACTTTATGTCCTTTGACGGTTCTTGT GAATCCGAAAATGAAAATACTTGATTCAAGGACAACAATATTACGTGAGA GTTGTTTAAGTATTGAAAACTATTCAGCCTTAGTACCACGGCATCAAGAG ATTAAAGTGGAAGGGTTAAACCCTGATGGACAGCACATTGACTTACATGC AAGTGGATGGACTGCAAGAATTATACAACACGAGATGGACCATTTGCAGG GAAACCTCTATGTTGATACTATGACATACAAAAGTCTACGGAACGAGAAA TGGCAAACATACAAAACTTAAAAtagatttgttatattttttattcaatt ttacagttcatgttttgatgtatcttgatacaaatttttataccaaaaaa gAGTCATACACATCCCTTCATGTTGATCAGGAATTCTTTATCTCTATGGT TTTATTTTTAGCTACCATTATCTTTCACACAAAATTATCctatttattgc attttttataTGCATCATCGGAACTACCAATATTCATCAATTAATAAATT CCTTTCTTCTTTATTTCAGTTCAGgactttaaaaaacaaaatcagaaaac aattcaaaatgcaaagtttacaAAATTTCACAATGTAGGTATCAATATGG AATCAATTGAAAAACGTGTTTAAGCAAGTAAGAGGGAAAACAAATGGCAG AACTTCATGTTATTGGTGAGGTATCAGGGGGCAGTGGCTTTCCATCACAT AATTTATATTGTAAATGGTCAGTTCACGCTGAGGGGACATGGTCAATTTT AGCTGGTTTAAAAGAGGGACAAACTCAGGTTGACAACCCAGAGAATGAGG ATTATGCTGTATGGGCACACCCAATTGATCTGCATTTCACTACAAAAGGA CTTAAAGGATGGCCTAAACTCCATTTCGAAGTATGGCATCAGGATGGTTT CGGACGTAATGAAATTTATGGTTATGGATTCTGTCATATTCCAACTTCAC CTGGTAAGTGTTTTTCAATTCCATTTGTCTGGTGTATCCCACgggtaaaa tctttttattggtctgttttttaatcttttttttcagacaGTCAATTATA ATGTATTGATCTGATAAAAACTTTTAGTCGGTGTCTGAAGTTTTTAGGCT CTTTTGCAGTTAGAAAATGTAGCCAATGCTTTAATTGCTTTTTTCTCTAG ATATTATCCCTAAAATCCTAACCTTTGAGAAATCTTTTTGACCCAAGAGG CTGTCAGCTAAATCTAAATCTGTCCGGTTTTCTTTTTCAGGAAATACATA CCATactttaagggaacttattttggcgggaactaattttggcgggcagc aaaaatcctaaaagaaattaattttggcgggaactaattttggcgaatga cagcgtaaatttgttctattttgccttattttgagcaactttgatgaatt tcagggttcatggcaaaaaaaacaacaaaattaattttggcaggaactta ttttggcgagtgagcaaaatatttaatttccgCGGAAACGAGAACTTGat acttttgaagcttttggtGATACAAAGtcactctgaaaatttgagatcaa aagcTTTTTCCGTTCCATTTTTATGGCTGTTTTAATTCCTTTACAGTCAA ACCTCtcttaaaagatattttatccTACCGGGCCTCGTTTCTATGCCGTT TCCATGGGATActtttgtttgagaaaaaactttaacattgaaatatctca agaaccGGAAGAGCTTTTAACATAATTCtttctttgttgattttgaaTCT TTCTAAATTAAATTTAAGTAGAGCAGGGTTTTGgaatacagtatatggcc cccaaaacggagacggcccccaaaacggaggttgtcattaaaatgaggat tctgacttatagatttatcagaattaaacgatttttgtttattttgaaag aatgatggttaaacttaaaaatgagcatgttttggatggtttgagacaga ttcaaaataacatatttgcgtctgaaggaaatatcttaacaccaaaatta gataaaaattgcatataactcactctagctccttggatattgaaaataag ttatgtaAATGGGgtaactttctacacctaatgcctttcagaaaatgcag atacatctgtgactttagaggatgggtaaaagatgtagcatcttaaaggt caaccagtattttgagaccctagaatcagcattgatagaaccgaaaattc taaatatgagaaacagcaaaaaatcttggaattccattttTATCAGCTTC AGTTAatagcttataacaaaaaattaacattatatataaaaattttcgct gaatcagcaaaaacggcaaattctgtcatttttttgagtATAGgggaaaa atacctttaaagcttaatattttcagtttctgttaagctttttttctaaa attttcacaNttaaagcttaatattttcagtttcagttaagctttttttc taaaattttcacagcttattccatacatgaatggaactattttcaaaaga gattggttttcagtaacttgattaagacgttgttaaatcaaaattgtcat tttggaaatttctaaattttcagtttggactttgcaatatcgaaaatctt gagatatatttcataaaaatcataaattttacatttatcgggtcgtaaat ttaagggtaaAGGGTCTTCATATtacggtaaagaaattttgttttgttcc tcgaattagtatatttttttaaatttaatttaatttttagctgggatctg ggagtctgggctgaaggtgggaattttaagataaggtgggacctgaattt tcaggggggacctggaacccccttgcacactatgctattaccactgggct taataatttgattttaactacacctccgttttgggggccccaaacctccg ttttgacaaccagggatatactgtaaaaattttatcaaacaaatttatgc ccaaaaccctctaaatcacatttcaaaactatggtcaaaattttgtaNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNaaacctccgttttgggggccattagaaaaaagctacctatc tttaagcgattgaaaaatattgttgaaattgaaaattttgaaaaagaact tccaggaaaaaaagtagagatgttaaagctTTTCAtgcaggaaaaaattt tctaaaacctcttttcctctagctttgagagaaatttcaaatttgatcga cgttttggggccacatactgtagtgtttttcaaaaagtcgaaataaactc gggaaaggtgtattttggcgaatttcgtctaaattcgccaaatccgccGA AATTAGTaacttttcaaagtaaaaacCAACGTTTCTCTTTCTCATTTAGG ACATCACAAACTGACCTGTCCAACTTGGAAACCTACCGGTAATTGGAGAC AACGGATACGATCTTATTTTGTCGGTGGTGGCCCTATATTACGTAATTCA GACATTATCTACACCGGCCCTGACCGGTATCGCTTAACAACTGTTGCTAT GGGGCAGATACATTTACAATTAGATATAATACTAAGAcgttttgataaat ttggtaTCGAATGTGGTTGAAATTGTTCGAATACTATTTTTTGTGAGTTG AGGTTATGGTGATAAACTCTCTTATCTTAAGATCGTCATGGATTTAGGAT GATTACGTTTAATCGTCTAAGTTTTCAAACATAAAGAAATTTTATATGAT AATATCACATAATAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010064TCONS_00010064Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010064-proteinTCONS_00010064-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102supercontigsc0000102:124359..132823 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
B9D2PREDICTED: B9 domain-containing protein 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.92 5.78 3.21 2 36.56 27.51 18.05 19.37 14.27 14.45 16.24 12.86 8.18 8.89 9.76 10.44 13 10.21 7.67 7.45 8.53 9.47 10.11 10.07 15.97 16.66 6.09 4.15 8.5 7.79