XLOC_005707 (gene) - C. hemisphaerica

Overview
NameXLOC_005707
Unique NameXLOC_005707
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000103:178053..182123+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005707 ID=XLOC_005707|Name=XLOC_005707|organism=Clytia hemisphaerica|type=gene|length=4071bp|location=Sequence derived from alignment at sc0000103:178053..182123+ (Clytia hemisphaerica)
AATTAGTTAAACATTTTCGTCAATGGTATATCAATGCATGGATTATATGT
TTCATGGTTTCAATCGGTAAATACTATAATCGTTAGTGAATAAATGCTAT
AATATGCTTAatcctttaagtgccacggtccttttttctaagcacggaaa
gggttaatcATTGTGCGTAAGGGGATTGGGTAACAGTGGTAATATTTTTG
CCTTGATCACATAGAGCATCTGACGTTTTTTATTTCGACTCGAGTGACAT
TCCAGACATTCGAGAATTTCACAATCTAATATCTTAGACCATGCACCATA
GCTACCAGATTGCATACAGCAAAGTTTTTCAGctaaatgaacaaattttt
aagtCAAGGAAAAAGGTACTGTCCGGCGGGACAAATTTACTTTAATACTA
CAAGTGATGGTGGAGTCATTTTCAAACCTCTTCTTTTAGGACCTCCCCTC
CCAAATAAAGCATTACCGCCATGAGCAGGTAGTTAAGCTTGGAAATGTAC
AAAGGGGCTTGCAAGCCCTTTTACTTCCGCCCGCGAACGCCCTTTTACAT
GAATCGAGCCAACTGTTCCGTTTGAGTGGTTCGGATGGTTGTCATCAAGC
TTACTAGAGAGTTCTGAGAGTTGGGTTGTGGCTGGTAGCTAGCATATTGT
GTGCTACTGTATTATGATTTGCCAGTATGTATTTCCTATGATAGATGGGT
TTAGTTCAAAGATATATTTCGTAAGTACAATTATTCTGCACCACCCTTCC
ATGGTTTATTCCCCTTCTCCAAACCCCCCGATAAGGTAGAGGAGGGACCT
AAAGGACCTAAAGCCCCCTTCCCTACTTTATAACAAAAAGAACTTGTCGA
ACCTATAACGTGACGTGAAATGAACTTACATCTAATTACAGTCTAACATC
TAATAagataataccgagtttatatATCGGATGATATCGAGGGCGACAGT
AATAGTCAAGTAGTCgcgcaaaacaaagtcgatagttgatgtacggctct
atatcgcctttgctcacctaaacagacgacggtattttggtgtttttacc
gtcgtcgtgCAAAGTGagcggtgattttggagacatgtcaactttgcttt
ataccgtccccctcgatttatctcgaatacataaactcgctaatgaatAA
GTATGTAAGGAAAGTTAATTGGAGGTCATATTGAAGGATGTCAAAAGTTA
AAGATATCATTTGTGCTTTTAATTGCGCGTTTAGCGAATGTAAATGAAAG
ATGAGATTAATCAACAACATATAtccccttttttataagagcattcaaaa
tttttggatgttcttaaattttcgaggtttttaagcctaaacatgttctt
attttcaccaatttgtgagtatttttgtccgttttcttAAGAAATAGGGT
ATTTTCGAGTTCGTAAttacttaaaatgttcctaactttttcttaaaatt
tcggccatcgaattcttatgttcttatgtagtttgttcttataaaaaaac
gtgcaggGAATTCCAGGGAAGCGGAAAATGATTAGAGACAAAATGACGTT
GAGTCgcaagtttgtttgttttctttgtcattacaaGATTGATGACGTCG
ATTTCCAATATGTTTCGAGTGAGTTCCTTCTATTTTCTAATCTTGTTTGA
TTTGTCGGTTTAAATCGAAATTGTcattttgttgttattttttcgtCGTA
AATAAGTACAAATTTTTGAGTTGAGTGTTAGATTTCAACCGTAATTTGAT
TGGATTTGATCTCGATTGTAGTTGATCACGTAATACAAGGCTACATATGG
TAAGGTTTTGTCTGACCAGAGTTTTTTCCAGATAAATCAAAATAGTGTTA
GTATACTTAGATGAAGGAGGTCGAAAtataaaaattgatatgaaGAATAA
CCATTTGAACGTACATAAATGATTCAAAACATTCTCATCTGAAGTATGAC
AATTCAAGAATATACTTCAGTGTTTCTTCTAGCTAAATAGATTGGAATTT
AAATGACAAAAAACCGCATGATAAGTTTTATGAAGGACTATATGTTACTC
GATCTCAGGTCATCTCTCGATGAAAGCGTGTACACAACAGATTTGTAGTG
CTGTTTTAGAAGTCATAAGTACACCTccctctcacagacccggtaggatt
ttttcagccagtggaaATAAGAATAACGGACTGAAATCTCGATTGGGATT
GATGTTCCCATATTTCTTATGgctttcaattcttttgttttcaagccaga
aaattcagtgaggatggGAAAAGTAGCATCAtatttttgcagtgaggatt
ggtttatttgattaatCTCAGTGGGGcagaaaaattggaggataattttc
caccggggacaatattttggacaatttttccagtgggcctgtgagaaggg
ggtgtacttATGACTTCtacgtactctcgggtacctaatagccggggggg
tttggaataaggggggggggggaggggttggaaaaaatctcaaaacttaa
taagcgggggggggggttggaataaaaatgtcatgggtggaaattttttg
aaaaggaggctaatacagcagaatcgggacaaaaaagggaaccttcaaaa
aacattttccctaaaattaataagccgggggggggggttggaataagaat
gtcctgggtggaaaattaattagcgggggggggggagggcggctattagg
tacccgagaataCTGAtgcaatttcattattttactcATAGATTAAAAAT
GACACACATAGACAGCGTGTTGGTCAGTGACGTCGAAAAAGCTTTCGGGT
TGAACAAGAGAGATGTCAAATTAGTAGGTTCACCCGAATGTGCACCGCTA
TTGAAACAGAACGGGTGGTGCTGTGTGGAAAACGCTTTCGCTAAATTACA
CCGATTCGAAGTAATAAGACACACCTCTCTTACAAATACCGCTCAGCTGG
TTGTTTGGTTCGGAAATCCTATCTTCGAATTCCCTGAAGGTGGCAAAATA
TACAAAGAGAAAGTGTTATTTGGGTTGTTTCGCTTATATAATTTACACGT
GGAGTACCGCGTTGTGGGGTGGATAGACGAGTATAGACGGCTAGTTCAAC
CGGTATTTCCATGGCATTCGGCAGACAAAAAAGTCGATCATGTCACAGAT
TTAGCGTTGTCCACTCTTTGTGACGACAAACTGAATGAGGATGAAGTCGT
TGCATGGTATTTAGAAGGCCCAACCTCGGAGGAATATATCTCACATAAAG
ACAATCTAGGGAAGTTTCTGGCAACTTTTAAAAGTATTGACATGAAAAAT
GATATAAGATTTTGGACACCTCGCTGGTTGAAAAACAGGGCCAAAGAGGT
AAACCAAAAGAAAGGACCTTTTCAACCAACGTAAAACTTGTTTTGGTGGA
GTAATCACGTTCAATTACTAAAACCTTGTTTTGTACATAAATTCTTCATT
TCTGTATCATATTTATAGAATAATTCAGTATTATTTTCCTTATAAACGAA
TAGTTTGTTCcaattattttcaacatttgacaCAAATAGTGCGATAAAAT
CTATTTCAACccagtgaagccacttatttcccatcctaaACGCGTGACCC
GCGCGCGGTTTTCGCACAAACGCTAGATTGGAAGTAAAACATATCGCcag
gatttcgaaaaatatgccgcatgaaaacaaagaaagtgctagGTTCAGTC
TGTCATTCTAAATGCGGCAGAAATCTTAAGTCCTTAAGATTTCACTTTTT
CTCGCTTGAAAAAGGTTGAATATTAATCTCTAGTCtctttcgggctttaa
actcaaagcTTTGCACtctgtttttattcaaaagatcagaaaaaaactaa
tgtaGTGTCATGGTGAATTTATGATCTACCATTTTATAACTATTGCTATA
GTAACCAACTCTATAGCCATCTTATTCAGCATTTAATTATATGATTCTTA
GTGAATGATTCTAAACACTTCTATGTTTGGGCTGGCAGAGTGAAGAGCTT
GCAAAGCTTAACGATCGTATCGAGGAAGAATGTAGACGTATTGGTTTTGT
ACGGGAACGAGGAACGTTGNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010167TCONS_00010167Clytia hemisphaericatranscript
TCONS_00010168TCONS_00010168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010168-proteinTCONS_00010168-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:178053..182123 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21	0.27	0.39	0.54	6.25	3.45	4.78	6.9	21.34	35.97	20.85	16.19	6.7	5.11	2.29	2.55	7.67	13.95	6.27	8.72	1.97	1.84	0.88	1.28	2.65	2.35	40.34	14.45	2.53	1.83