XLOC_005768 (gene) - C. hemisphaerica

Overview
NameXLOC_005768
Unique NameXLOC_005768
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:323116..334092+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005768 ID=XLOC_005768|Name=XLOC_005768|organism=Clytia hemisphaerica|type=gene|length=10977bp|location=Sequence derived from alignment at sc0000104:323116..334092+ (Clytia hemisphaerica)
GATATAGTGGAGAATtgttttcaagatggcggacagCGGTCTCCGAATTG TCAAAATCATTGGCTTGCTACTGGCTATCTTGACATTCATATTTGTGATT GTAGCCTGTGTAATGAACTCATGGTCAGAATGTACGGATATGGGCTATAG TAGTGGATTGTGGTTTTACAAGGACAAATCAACGGACATGCGCAGTTTAT ACGAGGAAAATTTCATTCGAGCTATTCAACGTAAGTTGTTCACATTTTCA CGTAACTTTAGATCTATTGAATAGTGgtagaaatttagaaaattgcATTT AGAAACATTTAGAAACATTTAGAAATTCCAAAAGAGTCTAAGAAGAGTCT AGAAAAGAATTTAGACTAAATTTTCTTTCgcaattttctaaatttctacC ACTATCTAGTCTATGAAAGACGAAACTATCTTCTACACTAGGTCACTAAA AAGGGAACAACTTGGGAGGCTGGATAACTTTGAAAATGGAGTTAGTTCGG CGTTGATAGACTAAGGTCTAAAGAATGTTCTTAAGGTGTTGTGCAAATGG AATAGTgctttcccagctggcacacaacgttgtttcaacgttcatctaac gttatatggacgttgtgaagttaaataaacgttgaaacaacgttgtgtgt cagctgcgGGTTCATCAAATATTCCCCATAAATTATTCTCCTGACCAAAG GAAGGTTTGTATAATATTCTCGTGATTTCCTTTTTTAAGAATACTTTTTT TGTCTATCGTTTATGGTGCATACGCACAAGTATACACGtcgaaaaatttc aatttacatTCGACCCATTCAAGAGCCCTCGACAAAAAATAACATCTTTT AATAATAACCTTGACTTGATTATGAGCGACAAATAACTTCTTGCGGTTTA CAATTTGTCGATTTTACGCATGCGTGCTGTAATTAAAAAGAGATtcattg acaaaaattctttaCTGACATAATTTCTTGAGAAAATAGAGAACGGTCAG ATTGCATCAATAATCATAACAATCACATCGTATACATAATTATTTTGAGC ATCAAGCAGGGAGTAAAGCTGATAGTAAAACAATATGGTCTAACGTAACA ATAGCTTATAggtttagaaaaaactaatccAATCTCTAAAAAGGCTGTTC AATCTCACGAAAATCGAAAACTTTCTTCTCCAAGAACTACAATTTTAGAG AATTTTGAACGACATTTCTAGGGAAATTCTCTCAAAGCATCCCGAAAAAA AATTAGCGAGGCGATAGTTTTTGGCTCGAACATACttcacaaaaaaagtt tcaccTTGGAAATCTTTAAGGTTTCCTTCCTCTTTTCTTAGTTTGGCATT GTGGTGTATTTTGGCTCAATACACCTCAAAAAATTCATATCAATTCAGAC ATCTTATACTTCAAGAATACTTTACTAGCGTTACACTTATGTGTCACAAG CTATCGAACGCAATACTTAGAAAGTTCTTAACGACAAAAAACTTCTTGCG GTTTGTGAGATAAGGATTTTTAAGCATGcgcttttaaaaacaaaactccC TCTGATATCATATTGCTTTGTGATTACAAAACTGTTTATGATGttgacat tttgattttgattgacagTTAAGTCAATGATTGATAGGTTTATGTACAAA ATAAATCTAACTTGTAGAAATCACTACTAGACTACTAGACTATTAAAATA GTCACCTATGACGCTGCAGTTCACTTTACGTTTGTTACGTTCGCTTAGCA TAGTTATTTCCAAACTAATTTCACGTCTTTTTCCCCTGATTATTATCACC ATCCCCCTCAGTTCCTACAGTCTCTGCAAATCTTGACCATACCAGAAGTA CATAGAAAATAATAGCAAGAGGTCTTACTATGgcagtcaatttttcaaaa actagcACGCAGCCTTGCCAACGTTATTTCTggctttttaaaaatatttg aaagttgaaGACTTTGAAATTTAACGGTACAAATAGACGCATTGCTTTGA CGTTTCGCTGGCTATGTATGCTACTGTATTTCTATCATCTCTATGATTcc aatattttaattttctattcaatttcaGCGGATGCAAAGTGTACAGGAAA AGTTACTGGCAACTGGAACACAGACGACACAAAATGCAACACAGCTTTCA AGTGCGATTCAAACTCTCAAGTGTCGGAAACAAAGAGTTGCTCTTCTAAT TATCAATTTGATAAAACCGATGGTACTTGCAAAGAAACCTTTGtgaccaa aattcaaatcagTGGCTGCCAACGTGAGTAGCAGTTTTCAATTTGTTTGA AATTGTTACTTACACATTCTATTATAGAAAGTTATAGAAAGTTATAGTTT CAAAGTAAAAGAGGTTACAGTTAAAGAATGCCATTATATCTGAATGTTCA TTTATGAATAACTTTAACACACATATCTTCTTCCCATTTGGTCAtgagaa aattatcaaaatataataatataCACTCTCTTTTAAATGACCCTGCCTCA AGTGAATCGTGACGTTATGACTGATGTTGATTGAATGTCAAAAAAACGTA GTGTGCAAGACAGACTTCATCATGAAAAAGAATACAAGTTTTTTATGTGA ACAAACTTTACAAAGAACAAAAGGCATCAATGGTCAGAACAATCTAGTAG GAACTCTAAAACAGCCGAAAAATATACCCACAAAATGGtgtaaataagaa aatattaagaacatttttttaaattttggatgttcttatcaaAAACGTTT AAGAGcagtaaatataaaaatacctGTCATGATTCTTTGTAGATCCGGAT TGTTATGGCAAAGTTGATGGCAAATACTTCCTGGACAAATCAACCTGCGA TGGTGGTTACACTTGTTCTGCCAGTGGTTTGGTTCGTGGTGCAAATGTAA CGTGTAGTGGTGACCAGTTGTTTAATAGTGCTACTGGATCCTGTACAATC AGATCTACAGATGGAAGCACATGTAAAGCGTAAGGAGGCTTTCATATATT GCTtacccagacggcacacaacgtcaaaacaacgtccatgtgacattcat aacaaaacaacgttgcgtgccaACTGGGTATAGAGAGCTTTTATAACTCT AGGTTTTGTCAGACCTAGGGTCGCGAAGGATAATGATAACTCGAGCTGTC AAAGTTTTACGTTACGAAGGTTCGAGCTGTAGAAATTTATCATAAGATAG TAAGGTATTTACGTTGTTGATGAATCATCAATTTGATTAGCTGCTTTCTT ATGATGCTCTTCCTAAGCTCAGCAACTACGAAGAAAGAtagagaaatcaa tgaaaaagagGGCAAAACGCCCTACGCAACTAgaggacacccctgtctcg ctgccccggtggaactttctttctcagtggggataactattcctattgaa atcccaatggggatagaaattcctttgttcCAAGGCTAAAATATTCAGTG gcaatggttttgaagtgcaatttttaaacattaaatgGGGACGAAATGAA AGTTAATTTCCAAGTGGGTATGAAATTCTAAGGTATTTtctcaccgggga cgaaatttttgtcaatcttcTCATTGGGTCTGGGCTACcagcaggtctgt gacacagaggtATTAGAGACCCTCGAGTTAATTTCTTTGCCTAAATGTGA TCATCTTTATCACACTTTACAGGTATTACGTTTGTCAAGGATCCAGTGAT TCCACCTTATCAACGAGCACATGTTCTAGTGGAACATATTTTAATGGTAC AATGTGCATTGGTATGACCATCTCTGGCAATGATAACACAGCGCCTGCTT CTTGCAAACGTAAGTCAAGTACTATTTTATGTAAAGGGCCAATATGGAAG GATCAAGATTCAGTTCTGTTCTATAAAATAATTCAGTCTATGCAATTCGA TCTTCTGTTATTCGAAAGATATTGGTGCCCAGCTGAGAATAAGTAGTGTA AAGTACTCTCCgtaaattcgaatctttctgtatttcgaagaaaattcttg gccCCTTGAAGACAGAATTAGAGCGAGCCATTTCTAACGTTTATCCTTCG TTACgggaatgtttttatttttttcgattccctagactagcaaactagct TATTATCTAATCATGTCAGGGGGCGGGGACATTagggcggcgggcgtttg cttaAATAGGAGCTGCATAGtagaacgagcaaaagttggtgaaaaGGTGC TGACAAATAACTGATTAAGTTTCAGCCCATCCCACAGACAAATTACCTAA CTCTTCCTCTCGCTTTCCCCGCGTGATATCCTTCGAACCCGATTATCGTG TTCAGTCTATAGATTCCTTTAAACCTGGTTTGATACAGGCAAAATACACT CACAAGAAGGTAAGGTTTACTGCACATTCAATTGATTCAAaatatgaaac ttttttttcgtaCATTTTTTATCAGATGAAGATTGTGTGGGAAAAGTGGA CGGACCCCNTATGAAACTTTTCTTTCGTACATTTTTTATCAGACGAAGAT TGTGTGGGAAAAGTGGACGGACCCCATCGAAGTGGAACGCACACCACCGG TTACACATACGACGTACAATGCAAGAAATCCTACATCTGTAAAAACAGTG GTCAAACAAGAGAAAATTTACCTGATTGTACTGGCTCATTACAATATACG CCCACTGGATCGCCACCCACTTGCGCTGCCGCCCCTCAGTCAGGATGCGT CGGTGAGTGGATAAATTAGGTTGAATATCTAAAAGTGTGACATAAAAATT CGCAATAGGATTACTGTTTTTTGTTACGAAGATTATTCTTAGCATCCTAA TGGATCAATTATCAAGTCAGATgctaaattttagaaaaacttgaCCTTCA TTAATATCACAGAAACCTTAAAAACATatcagaaaaaaaaggaaattggG CATATTAAGTGTTCCcggcaaaaattattttgttcattattttctaaatt caaaattcgTCAGGTTTTTTACCATGAAACCACCCAAAAATTATCGTCAA AATTACTTCTAATCATAATAGAAATTTAATTTACATAATTCGATATAAAA TATGGAAGGATTAGTGACTTAGGGAGGGAAACTTTCATAGCGTTTTGtgc taaaaaaacatttttctatcTTTTCAGCATCAAGTTGTAGCGGCAAAGCA GACGGTTACCACATCACTGATTCAGGAACATGCCGAAACTACATCAAATG TCGACAAGGTGTCGAAGAGTCTACTGTAACATGTCCCGTAAATAACTTTG CTATCGTTTCAACACTCGCCGCTTCTTGTTCTTTCCACCGTAAAGACTCC ACGTGTAGTAATTACTACACGTGCTCAGGGACCACTGTTACCGAACAGAC ATGCGCGTCAGGCAAATATTACAATGAAGGCAGTAAAGCGTGTGAAGACC CTGTATCAAGTGGTGGAGGTCTGGTATCTACACTGCCTGTCAACTGTAAA CGTAAgtgaataactttttatctaCAGCATGCCCGGGAAAAAAAGCAGaa caaaaatctataaaaagtacagtaacgctctctaattcgacgttctacta ttcaatacactccattattcgataatattgaaagttaccgtcaacaagaa actctcataaacgacgctcaaCCTTTTGATACGCTCCCCGATGAAATCCA ATTTCCCAtagaaatcgaattagagagcgtcaactgtaattaaGGTTTGT GAATGCTTTATAATTGACAAAGTTAGTAAATCCCTCTTtgacaaaacaat aaaattacaaTTTACAACAACAATTTTAAAACCTACCTTCCATTAGTTTG ACCGATACACTGTATTTGACTATGAGCTCCTTTTGACTTAGCGACAATGC AAGGTTATATACGTTGCAAACCTTATCATCATATTTCAATACCtacctca aaaaatattttcctagaATTCAAACTCAGCACTTTAGTATCAAAATTTTG GACATCGCTAAATCGAAGATACATAGTAAAAGGGTTAATTTACCGTCTGC CTCAGGTTAGgatttagaagaaaaaaatgaacaaaccgTTTCCACCGTAC AAAACACATCAAACTCTAATATATAATACTCTTTTTACAATACAGTGTGT CCAAAAACAATTAggcaaatttttatataaagtaaaagaaACTGTACTTC AATCTCCTTAGATGCTGATTGTCCATCCGATGGGACTTACTACGCAAAAA CCGGAGGGACAATCAATACAGCCTGTAACAATGCGTACACGTGTGCTTCT AACGTTCGCACGACGCTCGCACAGTGTCCAGCTGGCCAACAATACCAATT GACACCGACTGTTACCTGTACCACAACACACCAATCTGGATGCGATCGTA AGTAACTTAAaagagaactaattttcgcttttttcgaggttttttaggca aaaccgcgaaaactaGAATCcgcaaatttttaaattttgccatCGTCAAA ATAGGGGAAAACTGTGACAATTAATTTCCTAATTTCCACCCTGTTAATTG tgcaaaataaccaaaagtcgaccctgtcagataaaTATCTTGCCAATTAG TAAGGTTTAAgaacctgtcagatatcttcagagcctgaAAAGGGaacctg accagcggcacgttcccatacccaattttgccAGTAAGTGCCCCGCCGCC GGGCATCTTGCCTGGAACCTTGAAACGTAGATAATTGCTGAAAATCAAAT CTGTTTCATTTTTATGGTATAGATGCTGATTGTAGTGGGAAATCAGATGG TTATCATGTGACAGATGGTACCACGTGTAAAAACTACATCAATTGTGAGA ACAACGGTGCTAAAGATAACACAAAGAGTGGAACGTGTACAGCTGGTCGA GTATTTCTTGTCTCAACGGGGACGTGCTCCACTACCACACCCTCAGGATC GACCACGTGTAAAGATCCAAGATGCGATGCCAACCCTAATCACAAAGGTA AGAATTATAGTAGGCTGAGAGTTGACAGTTGACTCTCTCAAACTCGAACT Cgagcaaaaataaaatcttgtttgttcgaattacagagagattcaaattt tggaaagtaaattaaaagGGTTTCTCTTTGACGGGGACTgtgaataagtt cgaattatagaaagattcgaatgacAGAAGTTTGAATAAGTGAGAGATTA CTGTAACTGTAAATTTCAAGTAAGCACCATGTCAATATTTAAATTTGCCA AATCTATCAGCCGAACAGTAGGTATACTTGATGATTCATTCTTCCCATTT CAATTTATCCAGCTCACCAATCGACAACACAAAACCCGGGACTTCGAAAT TGTCAAACGTGGTATGAATGCAAGAATGGTTTTTACACAGAAGGCACGTG TGGTACAAATGAATATTATGATCTGTCTGATGGAGTTTGCAAAGGAACAT TCCCTTATACCGGTATGAATTTGTTTATCTTATAGTtcgaatgggctctt ccagaaaatatttgtaCATGAATTGGGGTGGAGGATAtcttggatatttt gtccggggtagtgaaaaatctgcaaaatttgccttgttttaggGGCAAAC TTGCTCTGATTAGGGTTTGAATatccggggggagggggtcaactgatgct tgtccagggggcGAGATCCGTTGTCCGtggggtcaaaattcacaatgtcc ggggggtgttctgttatatcctccaccNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttctggaagaacccA ATGTCATACAGGGACCATCCACATAGTATGTACGTAATGAAGGGGGatag ggggtttagcaaaaacGTACGCGTCTATCGTTCTCTGCGTAAGAGGGGAG GGGTATCAAAAATTGGTACTTTTtacgtacgtactatatggatgaccCCG AAGTCGCATCTCACATTCTAATGACCCCGCGAAATTAAACTCCTGCATTG TTTTGGCTGGTTCGCAAATATTTAGTGTCTGTGAAGCAAATTTCTTGAAC TTATTTTACCAGTGTTTTTGGCTACGAGAATCTAGTTTCGCGAAAAAAAG CTGATTCAAAAATGTTAATTCTATCAAAAGATGCGAGACTTTGGGAATGG TCGCCTTACTCAACAAATTTTTCTAGACGCAAACACTCTAGATATACGAG AGTACTGTACCTTCTTACAAAATTCATTAACCAGGAACCGATCATGCGAG CCGCGCGTTCACTTGCAAAGACGATCGTTGTTTCGGATTATCAGACGGTA AACACTGGCTCAATTCCGATTGTTTTGGATACAAGGAATGCACCAATCAG ATTCAAACATCATCTACCACGTGCCCATCTGGTACCCTGTATGACCCGAA TGGTAAATCATGTGTGGCATATGACAATGGCATAAACGGAAAACACGCTG GTTGTAAAAGTAAGTATTAAGATGCAAATATTTACACCAAATACACTTTT ACAATTTATCAAATTAGCTAGTATGCCAAGAATCCATTTCACTCAAAAGC CTTCTTGTTACTGTCGGGGCTGAGGAGGCCCAGTAAACACCCTCTCCCCT GCACTTGTTAATTTctagattttatatttttcaactttcaccCGGACTAC ATTAGGACCCCTCCATAATTACCCTATTTTGGGGTTATTAAGAGGTAAAA TTTCAGCCCCCCCTcgtttattacaattttaggATATTTCCATCCCCCCC CATTTATTAATCACTTAAGTAATACTCGATAACCTTAAATGTATCCTTAG CTAAATGCTACTAATATAGTCCATAAAGATTTGACATTTCCACAATAAAA TGGCAACGTAGTTTTATGTGTGGAGAAAATACTAAAATTCATCGATTTCA TCCTTAGTTAATGGCGGTCATGGTGCATGGGGCGCATGGAGTACTTGCAC AAACAACAAAGGCAATTCGTACGGTTTACGAACGCGATCTCGACCATGTG ACAACCCGACCAAAAAGAATGGAGGAGCCGCTTGCACCGGTGGTGCGTCC GAACAAACAATCTGTTGGTTGTGTCCGACACAAGAACTTATGGAAGTCAC TCGATTTTTCGTCATCTTGGCTATCGCTCTTGGAGGATTGGGTTCCATTT TTGCGCTGAATACTTTCTGTGTTTCAAGCAGCATGTACCCGACCGTCTTG TCTTCGCTTTGTCAACTTGGAGTCTGTGAgtgattttcttttaaattgac AGTTCATATACATTTTTTTTCTATcggcataacgtttataagcatacata GGCTCAGCCCAGGTGGGGGGAGGGcggtgggtttaccaactgacggtatg tgcggcgaaaaaattggcttttagaatcgcacccttacagtgcagaaaag aatcggtgaaattcatacccttacagtgcattttttcaaattttaaactt ttttagagcaaaataatcaaaagtttCGGGCAAAATTTTgctagatttgc tgaaatttccacccatacagtgcatttatcaaaagtccacccttacagtg catttctgctattttgaaaaacacacccttaaccgccgcacatacccgtc ggtcaatttgcctaactgccccccccccggaggctcagtttttggtacct aaactaTAACTCTATTGTTTAAGAATAATATGGGAGCTTGCTACAGTGGT ACACACTTGCTTATCAAAAAACATGTACCCAACAGTAAAATTTTACGCAT CGATACACAAATGTATTCAACAGTATACTTGATGGTTTTTCTCAAGTTTT TAGACAACTGACAAATCAGACAACCAAAGCTATTGCATGCATaatggaaa attgcaaaataaagTAGCTTTGTAAACTCAAGCCGTTATCTATCAATGTA CAACACTCATTAATGTCATTAATACAAAGTCGATTGCAAATTTGACGCAT CCTAGCAAAATCctcttttaaatatttttattctctCTTCACTTATTTTA GTCGTGTTCGCTCTGGGTTCTGCAGTCGCTTACACCAGTATCTACCCCAA AGATGTGGACAGCTGCTTCACCACAGGAGCTGGATGGACTCTAGCAATCG TTGCAGCTGTCTTTGCATTCATTGGCTTCATCGTTTGGATAGTGGCTGCT ATCAAGGTCTACAAATCTAAAGCAACCGGAAAAGTTGGTGCACGAGagta aacgaaaaaaaaatatattcaaacctATTCTAAGGATTAATAAGGTTTGA CgccaaaatttgaacaaaaatatcggGAGTGGTTGTAATCAGGCAAGTTA CTTAGAAGTGGACCACCAAAGATGAAGGTGCCTTTGGTTAAAAGGTTTTA CATCAAACTGGTATACAATGTCTATTACATACATCGTTGAATGTTATATA GATGTAAGCTGGACGTCGTGACTATACTGGTACTAATAAAGTAATGAATG AACGATACTGGAGTTATGATTACAAAAATATGATAATTTAAGAAGTCTTA AAACTTAACTTGAACTTGATCGGTTTACAAATAGACCGGCGGAATCTTTC CCTGGTAGATGTAAGATAAAACCGATTCGTTTTGTacataatttgttttt ttcttgtaaatatttCCATTTTCTATAAGATTATTCATTTCTAGGAATTA TTTAATTAGGTCGTCCGAGAATATTTGTGCGGACCATAGTCTAGAAGGCC CCtaagcgattttcgtgatgacgtgatagggacttttttttagcgtgatt acgtgattttgaatttttttttcgtgtttGCGTAATAATGAGAGGTCAAa ccgtgatcgtgatttgaaagatttttgagccgtgtGATGCGTAATTTgga ctttttgtttttgttgattttcgtgattgaagaccaaaaattgcgtgata tcgtgatcagagttaccacTGGGGGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010253TCONS_00010253Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010253-proteinTCONS_00010253-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:323116..334092 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.01 0.03 0.04 394.69 325.59 294.15 288.45 318.77 344.76 327.5 498.91 13.33 14.97 6.45 6.06 11.93 15.81 41.26 15.3 39.89 31.22 16.84 18.64 29.08 42.86 49.41 73.01 0.36 0.34