|
|
Sequence
The following sequences are available for this feature:
gene from alignment at sc0000107:78889..85408+ Legend: transcript Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005894 ID=XLOC_005894|Name=XLOC_005894|organism=Clytia hemisphaerica|type=gene|length=6520bp|location=Sequence derived from alignment at sc0000107:78889..85408+ (Clytia hemisphaerica)
attttgttgaaaagatgGAGACAACAAAAATTTGGTTTAAAGTCTTGAAA
CGTACTTGAGTTATATTTTTCATGGGGTAAAAAAACTCTTCTTCATTTAT
TGATATCAAAGAAGTCTAAGAAATTTACATTATTTCCGTTTGAACCTGTA
TAATGTTGCTTGGTTAGTATAGCTACTCTCTAGTCATATGTAATTCAAAC
CCCCCGGAACGATTGGAtcgagtcaaaactataaaagGTCGACATATAGA
GTAAATCATTTCAATTATAAAAGTCACCTTCTATCAAACCGATAACAAAG
AGTTTAGCAAAATGAAGCTGCTGGTTTTGGCAACATTTTGCGTTGCTTTT
GCATTTGCTACAGATGTTGAGGTAAATTGAATTGTTGTCATTCTGGATAG
CGCTAAGCGTTCCCACTAAAGAGTAGAACTTGTGCCCTGAAGGTTAGGGT
TCATTTCATATTATATAATCAATTCTCCCTTAGTACATATAAATCGAAAA
TATAATTTGCTCGCACAAATATAATCGAAGGTAGTAATGATCGTTTCAAA
TTCATGAAGGAGACTTTTGTTCAATTCAATAcgattcgaattatagataT
TCGCGATTACAGAGAATTCATCCTCATTGTTAAATATCATTGCCTTATCA
GCAGAAAACATTCCGAATTCTATCAGACCAGCCACCAAAATTTTCCTGAA
ATCAGATCTTTGTACTTTAAATTCTTTTTAGGAGCATTTAGAGAAATTTG
GATTTATGaataaatttcaatttgatGGAAGTTCAATCAAACATGCACTT
GAGAAGTATCAAAAAGCTTTCAACCTTCCAGTGTCTGGTAAGAATTAGTA
CTCCGACCTCACTGCTCAAAAGATTTAGATCATGTTCAGAGGTTATAACA
ATTCTGTTCCGCTCCGAAATAAAATGAAGCCTTTCTATAGAAACGGAACG
GTCACGTGCGAACATAGTCTTAGCTTCTCATTATCAGGATTCACCGAAAC
AATGAGGGTTCTTAGTATCCTGAACAGAACTTAATAATGCGAGATTCGTT
AACAGGCATAACTGAAAGTCGATaaataaacaagaaaaatgaaatacaaT
GAAGCAATGCATAATTAAAACTCCCAGTACTTAGACAAAAATGGGTACTG
GGTATGTGCATGTCATGTGAGtcgttttttcaattttaaaagtcTCACAC
TGTCGGACaaatcagaaatttttaaaCCTAAGGGTCGGTAAATtgcaaaa
aagtctctctaataccctgagtatcagaggttaagttttcaaagaatata
ttaacctctgaagaccaataatagaaattttatcgcacatgtgtcaatct
aatcactgtagaaagaatcaaagatgaagagcaaatattaccttataaat
gtctagcagactgtatcatcagtatgcagtttactatttacgaattcacC
AGAAACCTctaagtgtaattgaagtgagtttctttcgaaagaaatctttt
acatgatccccaaatgtataacagtaattactaaactattaattatggaa
atgtcactttaattgaattgaaataatagacagactttatgttatgattc
tctatcagatcactgactctttttaaaaagcattgatgatattttttagt
tgtgttttcaacgacgggaatcaaaatataaactttgaacttcatccaag
atcttggatggtcgtcatagttacttttgtcttcgttgattgcgcactga
atagaatctcgattcgtcggcacagcgtcgatatatgatttcgacttgtg
cttttcacggtatctctctaagggtacgacttttttcaaaagtggaagaa
aatgtttcaaaaaagtctctctaagggtcaccttttcagcaaaaattagt
CTCTATAAGAATCCCTCAACCCTAATACCCCCTGGGTACAGAATCGACAA
ATATGAAAATACTTTTATCTAGGCGTCGCCGATGAAGCCACCATGAAACT
AATGGCAACACCACGTTGTGGTCGCCCTGACAACGATGCAAACAATCTTT
TTGCTGACACAGCATGGAGAAAGAAGGCTTTATCTTATTACTACAACAAT
TATACACCAGACTTGAGTCGTTCAGATGTCCGTTCTTTAACAGAGAAAGC
TTTCAAATTCTGGGCTGATGTAGCACCACTTCATTTTACAGAAAAAAGCG
GCGGAGATATTGTTGTCTCGTAAGTTTATGATTGATCCCTTAAGACATTC
AAGTATGATTGGAATTGGCAAAAAAATAGGCAACTACTCCATTTTAAACC
TTCATCTTCATTTCATTGTTCAGTTTCTGCCCTTATGTCAGCTCATTTGT
CCATCATGGTAGTTTTTTTTGCGTCTTTGAAAAATCCCAAGAAGAAAATC
TGTGACGTTCACATCTGCTTATTTACGTAACATTCAGATAACgctggaaa
aaaatcaaaacatactCTTTATTCTTTACTGGGAAATATCTTATGCACTG
GAAATCATCATAATTCATGaaataatgttttatacggaagcaatGACATG
GGTATCATGAATTTAACACGTTCAACATTTGTGATCACATTCAACATTTG
TGACCACATTCAACATTTTGTGAccacattcaatatttttgtttacattt
catAGTTTCGGATCACGTGGTCACCACGATGGAAAAAGACAATGTGGATT
TCCTTTTGATGGGCGTGGTGGTGTTTTAGCGCATGCGTTCTTCCCTCCTG
ACGGTCGTCTTCATTTTGACGAAGATGAAGGATATACTGCACGATCATCA
AGTGGTAAGTGACCGATAGACCTCTATagaccctggaccaagttatatcc
gccatctttgatcggagacTTTTTAAAAAAGGTGGTGTGTCTGCAAAGAA
TCCAATGTAGTGTTAAAGTTTAGTCTAACGACAAACGGTACTCAAAAGTA
GGATCTTCTCCAATCAATTATTTTGCTTGGTCAGGATTTGGTCCATATCC
CCggaggggggcactcgattttgaaaacgaccgtatgTTTGGCcgaaaat
caggtctctaaaatcggacccttacagtgcaggaaaaatttggctgaaag
tCGACCCTTAttatagtgcaatttttcgaaattgtttgcccttttcaggg
caaaatattttgaaatttctcaaattttacctcaaaatttggtattttct
caaaatttacaCCCTTAccgtgcactttccaaagtgcaaaaaacctaccc
ttaagggccgtaCGTCCGGTACGTCACTTAACttgaggcccccccccccc
cgggttccaTATTCAGCTCAGGTCATGGAAACttagaaaagtaatatttg
AAGACTCGTGGGattaattgttttaaaaagaggcAGTCGTTGCAATCAAA
ATATCACGGAAAAACATAACTGAATCTCATTCGACAAAGGGTACTGTATA
CAATCATCAATGAGGAGTATAAAGATAGAAATAATTCGCTTGATTAGAAA
AGACAGAGAGTTTAGACAAAGTTGGTTTTTAGCCAATGACAAACTTACCC
TATACCATTAATCTCCGCGTCCTTTAATCACTGTGAATATCTTTACTgat
aatatcaaaataataccgacaaacttttgtaaaaaaattactAAAGCTAC
GATGGCGTGATCTTTTTACTTCGATAAAGACGAAATACAGAACAGTTGTA
TAAGTCAGAAAAAGTAATCGAATTATTACTAACTTTCAACTATTCTTTTA
GGAACAAACTATCTTTGGGTAGCTACTCACGAGTTAGGTCATATCCTTGG
ATTGGAGCACGACACTAACAACCGTAACGCTGTTATGTATCCCTACTACC
AACCATATCGTGCCAACATGCAACTTCATAGCAATGATATTGCTCGTATC
CAACGCCTTTATGGTAGAGGGCAAGGAAGCGTCAACGGAAATGGTGGATC
AGGAGGGTCAGGAGGGTCTGGAGGCTCCGGTGGATCTGGTGGTTCTGGAG
GTTAGTCTGTTTTCTATTTTTACTAAGTAGGGCTAATCGAAAAAACAAAC
TTTGAGGTTTTTCGATTATAAGAACACCCCTGTGACAGAACCGGTTGGAA
CCCCATCCCGCCCCTAGCTTCCGTCCTCGGTGGGAAATCACGTCACAATT
TCAAAGTTAATCTCCCAGTgaaatgactttgatttcatccctatttgaaa
ttcaatgaaagaattgcacttcaaaaccatccgaACTAGTTTCTTTGACC
TGGGAGCAATATAATTTTTGTACCCATTGCGATTTCGATATAGATGTTAT
ACCCAACTGGTGGAAGATAGGATGGTGGACAATAAACAAAGTACCAGTTA
TTGGAAGAAGGACCCAGCGTTGATACACGTGCGATGCGTGCTCTTGGCTT
AAGTAATATTAAGTGAAGAAAAAACCTTATCAGCTATCATCGGAGCAGAA
TCAcaaaaatccaaagaaaacccatTCTCACAAATCCGGTGGGAGAAATT
GaacaaaatatcgtccccaatGGAAACTTATACTCCAACTTTGTTCCCCA
GTTAATATAGTCGAATGGAAAATTCTCGCTGCAATATATTGGGCTATTTT
CCATCCCTATTTTCCATTTTATATGACTTGAGACCATAATTTAACTTAAA
TCCTCAGCCATAAAACACATAGGAATATTATCCATATCGAGTTTTCATTC
GGGCTTAATTTCGGATATCTTACCGTTTTTGAGAATTGGAAGTTCGGACG
AGATTTGCAATTTCAGCATTTCTACTTTATTTCATTTGATATTCCAATTT
TGGAAGGATTCAGTTGCTTCCAGCAGGATATATTCTCAGCCCTCTAGGAA
CAATGTCCTTAGAAATCCTGAGAACCTAAGGTcctgagttttaagtctca
tgttaaaactcagactTAAGACTACACGCTCAGGAAGTAAATGAGAGAAC
TCATTTGTTGCGTTTAAAACCTTAGGGGATTTcccctttttttcaaatat
catgGACTTTGTTGCGGGTTAGTAAGAACGGGATGTCCAATTGGAAATCA
AAGCACATTATTTTGCTTCGAAATGGTATGGAATGagaatgatttcaaaa
tttcactttagaataaaatttgttgacaaaacaaaaaaggctCAATTCAA
TATAAAGCTTTACTTTAAATCTATTTCAATTTCAGATTGTAAAGATCTTC
AagcatcttctttttgttcATCCAAACGGGATGGATGCTCCAAATGGGGT
AACGACTGGAAACGTTATATGGAGAAGAACTGCAAGAAAACATGTGGCTT
CTGCAGTGGTGGTGGAAGTGGTGGAAGTGGCGGTAAGTGTGGTTATTGAA
TTCATGTTTGTGTATTCTATTGTATAGCTATCTAAATACATATCAATTTT
TGGAGACTTTCCCTCCCAAACTCTACAACATTCCATGCAAGCCCTCTATA
AAGATACAATGTAAGTACGAAATATCAATAGTTGTCATCCTTAGCTGCCA
TCTGGACGGTCCGATGTCGTCCGTTTAGAGAGTCAGTGAACGCGAGAAAA
TATATAAGCGCGAAGTCAGGGCGTCAGAGCGGgaaaaaaagtggcggtag
agttttggaacctCCGCCACTGTTTACTCCGCCCCAAACTNTTAGAGGGT
CAGTGAACGCGGGAAAATATATAAGCGCGAAGTCAGGGCGTCAGAGCGGG
AAAAAAaatggcggtagagttttggaacctCCGCCACTGTTTGCTCCGCC
CCAAACTAAACTTGtcttcaaatttatcccgcctcctgaattattcccat
gtgtagacgataggatcctctaggggggggggcactcgttctgaaaacga
ccatacgttcagCCCAAAAATTCACTTTCAAACCGAACCTTTACAATGCA
GAAATAAGCTACGAAGTTTGACACCCTTATAGTGCGAAAACCGACAAAAA
GTACACCGTCATAGTGCATAACTCTCTCCACCAGACCTTTCTAATGGAAC
ACCTccctttcaaaaatcttttaagacACACAGAGATATACatattatat
acatatatacTTATGTACAAGAGCGCGAGCATGGTGCTAGTGAATAATTT
AGtttaaaaatcgacccttaaGTGCCGTACGTCTGGTAAGTCTTTTACCT
TGAGTGTCCCCCTCTGGGCCCGACATTGATACCCACCGTGTCTCTaggat
tcacttggcaagttaTTCCTACTCCGGTAGgcattcggagggctcatatc
atcTCTATTTTATCTCTATTTTGTAACTTTGTAAATGATTTATATTTTTC
GTCTCAGATTGTAAAGACACAGTAACTGATTGCCAAAAAAATATCCGAGG
ATGCAGCAGTTGGGGACAAGCCTGGATAGACTACAtgaagaaaaattgta
aaaaatcatGCAATTTCTGTTAAGAATTTATTTTAtatttgttgaaACAA
TACATCATcatcaaaattaattaaaaagacAATAGTTTTAATATCTATTT
TCCTATGTAGACCTATACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107 | supercontig | sc0000107:78889..85408 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| MMP7 | matrilysin preproprotein | Homo Sapiens |
|
