XLOC_006055 (gene) - C. hemisphaerica

Overview
NameXLOC_006055
Unique NameXLOC_006055
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000117:93040..96828+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006055 ID=XLOC_006055|Name=XLOC_006055|organism=Clytia hemisphaerica|type=gene|length=3789bp|location=Sequence derived from alignment at sc0000117:93040..96828+ (Clytia hemisphaerica)
NATCAAATAACTAATAATGTCATTCAACTTTGGAACACCAAGTACATCGG CATCCACAGGTGGTGGATTCAGTTTTGGTAGCACAGCCAAGCCTGCAGCA TCAACAACTGGATTTTCTTTTGGTGGTGCTACAACTTCATCATCGGCTGC CCCAGCTGCAGGTGGTTTTTCGTTTGGTGCGAAGCCTGCTGCAAGTGTTG CACCAGTTGCTGGTGGAGGGCTTTCATTTGGAGCAAAACCTGCAGCAACA GCTGCCCCTGGTGGGTTTTCATTTGGTTCTACTCCAGCATCGACTGCAAC CGCAGCTCCAACAGCAGGTGGTTTTTCGTTTGGCGCAAAACCAACAGCCA CTGCTACAACAACTCCATCATCAGGATTTTCATTTGGTGGTGGAGCAACC AGCACTGCAACAACATCAGCAGCAGCACCAAGCTCAGGCTTTTCATTTGG GTCATCAGCTGCAGCCGCTACAACTACCACAGCCTCAAGTTTTTCTTTTG GAGGAGCACCAGTAGCGAAGAGTGCTCCTGCCCCAGCGTTTGGAACACCA GCGAGCTCAGCAGCAACGTCAGCTGCTAAACCAACAGGATTCAGTTTCGG CACTCCAGCTGCTTCTTCATCAACGACGACCACAACAGCATCAGGTTTCT CACTCTCAACAACTGCTACTTCGGCTGCTGCAAGCACGGGTGGTTTCAAA TTAGGAGGTGCCGCAACTACAAGTGCTACTACTCTGGGTGCAGGATTGAA ACTTGGAGCAAGCACTGCTACCACTTCTGGATCTGCAACGGCAACAGCTT CAGCTCTGTCAACCTCTACATTGAAACAAGTTTCTTATAAGGTAAGTCTG TCTCTCGAATGGTTTAGCTTCTCGCAACCCAAGTCTGTTTTCTATTCTTA TTGATAGATACTGACAGGGAAGGTTTTGGTATAATNACAACCCAAGTCTT TTTTCTATTCTTATTGATAGATACTGACAGGGAAGGTTTTGGtataatat aaaatatcaaattgtttagaaaaattataaatgcctcataaacaaatgaa aaattttattcATGTGATAATATCATCGATCATAGTGTCCTGTAAAGGGG GCttaagaaaattcgaaaaaagttGGAAAAAGTTGTTTTCAAAGATCCAG GAGGGTGGAGGTAGAGAAAAATTGcttcaaaaatccagggtgggGAGAAA AGATTGTTTCAAAAAGCCAGGGGACTGAAGAGTCtagaattttcttttct tttgtaacACAAAAAAGGTAGCATTCCAAATCATTAATTATtaacttttt attctttacaccaaaaatttgttaatttcattctttggaagtttttttta aattttttcattgtatttaaGAAGATAATGTCAATAGAAGCGACGAGTAC AAACTTGCAGGAGGGAATTCTTTTGAGATATTAAGGGGCAACTAAAAGGA GGGGCAGAGgagtttttttttccattttcaaagGCAATCAACCTACCAAT ACACTATCATAACTggaatgaatttatttttacattagattactttaagt tttgaatttatgatttttttaaaaattctagtCACTTGAAGAGACAGTTG ACAAATGGCTTCACGATTTGAATGAACAAGAGAAgatatttttaaatcaa gctgcACAAGTCAATATGTGGGACAGACAACTGATCGAGAATGGAGAGAA AATCAGCGAAACACACAATGAAGTAAAAGcaaatttctctttttctctaG ACTCTACTCTAATTTTGATCTAAAATACCACAAAGATATTAGTCAAGTTT AACAGACGACAGTTTAACATCAAAATTATTTGTCTATTAAAAAATCAATG CAGTGGTACATCAGGCATTGGCAACAATGTTACGGCAAAATTCTGTGTCC TTTTCAGAGACAATGACTTCAGACAATTGACTTCAATACTTCCTTGTAAA TTCCAACCCAGTCTCGATAGCTATGGAGCACTCATATCCATATCCTAGAA TTTTTATACCAATTCAAAAGCTTTCATAAGAGATTATCTTTTTCTGTCAA AtcattttaatatttatttgttaataagaaaaaattcaaatggaATGGTG TATCCTCAACtattttcttgacaaaaaatTCTATCATAATTaagaatttc tttattttaaggTGTTCATTTCagtttaaataaaaagattcTTTATTTAA GCTAACTTTTGGTAAAAATGTTCTTCAGGTTGAAAGAGTGAAAGCAGAAC AATCGCGTTTAGATCGTGAGCTCGATTTCATTTTGTCTCAACAAGAAGAA CTCGAGGAACTACTGAATCCCATTGAAGCACAACTGAACTCACAACAGAT GATTTCTTACGCGCAACACGCTGATATTGAACGTGAACGCACTTATGGGC TTGCAGAAAACATCGACAGCCAGCTGAAACAAATGATGCAGGTATGtgat tagttttaaagagatttATGTGACATAAATTTTCTGTTgttgttaaaatc tttttcttgatAAAGATGGTAGGTAGGTTATTCTAGCAACATTTTACTAT AATGCCCATTCTTCAAAACTATCATTAAGCATTTTTCACTTAATTTAAAC TAACGTATTCGTCAACTAAAGCGTTAGGAGACTGTTTTTAGGTTTACCAG GAAGGGGTGCCATCAAAGTGTCTGAAGTGTTTGTATTGCCATTCTCATAG ACAAAGAATATTGACGTCATCTACTTGTAAATTTGTTTCCAGTCTCCTCA AAGCTGAGCACACTCGTAGCGTATAGATAGGTGTATTATCCAAGCATCAT TTCTGTTCATATTGATTATTCCTTTTTAAAACACAGAGCTTGAACGAGAT CATCGATCATGTCAACACTTCCAACACGActcctaaaaatcaaaaagatg aCACCATGGTgcagatttcaaaaattctcaACGCTCACATGGACTCCTTA CAATGGATTGACCAGAATACTAATAAACTAAAACAAAGAGTGAAAGAAGT TTCCCAAACTATGGACACACAACGTAGAGAACAANATTCTAAACGCTCAC ATGGACTCCTTACAATGGATTGACCAGAATACTAATAAACTAAAACAAAG AGTGAAAGAAGTTTCCCAAACTATGGACACACAACGTAGAGAACAAGAGA GATCTTTCAATTATAATTATGAGTGATGGCTCACTTAAACTGAGTTGCAT ATTCAGTGACTTCATGGGTGTCACAACTCAAAATATTCAgaatcaaataa ttttttaatcgaCTTTCATGAGAAATTACAAATCTATTGATATCATTACT GCTGCTATGGTTGAATATTGTCGTCAGCTAACTAAATTCATTGCATTAAA TTGTATAAGGTTTAATCCAATCCTCCTGTGGCATATAGTCTATTGTTTAT CAGTttcaatatttaatttttcatggTTTTATGGTATACAAACTGAGATG GAATTATGTGTTTGTTCAAGAATcatcaatttaaaaaatgatcagAAGAC TCGTGTGAATAATGATGTCGAGATTTCCTACAATTCTGACAGTAAATCTG TACACGATTGTAATGTAAATTTGATAACGTTTATACAGTTTTATTTTGCA AATAAATGTTGGTAATTTTGTATCTTGCTTCTTATTTAGCATAGAATGCT CtatctttttaccattttgaacATTTGAATGAAGTGAGTTGCAGAAAgat gtttcagaaaaaaattcttcaaatggAGATGATTTGCCCATATGTGTTAA AGACCGCAAAAGAAATCTTGAGATGATCTAAATAGCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010781TCONS_00010781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010781-proteinTCONS_00010781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117supercontigsc0000117:93040..96828 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NUP62nuclear pore glycoprotein p62 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
117.2 112.09 135.18 133.82 38.49 30.32 29.4 32.46 32.58 36.29 24.17 19.8 19.5 19.49 26.25 26.71 44.53 34.79 13.31 13.9 24.72 23.69 65.31 58.78 23.85 26.4 13.2 10.47 31.42 39.61