XLOC_006191 (gene) - C. hemisphaerica

Overview
NameXLOC_006191
Unique NameXLOC_006191
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000119:433282..442575-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006191 ID=XLOC_006191|Name=XLOC_006191|organism=Clytia hemisphaerica|type=gene|length=9294bp|location=Sequence derived from alignment at sc0000119:433282..442575- (Clytia hemisphaerica)
GGTAAATTCTCAACCTTCTTTATTTTTACTTTATGCATTTCTTTCAACAT
TTTACCTCATTTTCATGGAGGAGTATTATATTAAGGAGAGAGTAGAGAAT
TTTACTATTTCCAGTCTGAGTGTTGCACCAATTACAGGAGAGGAGCGAAA
CCCTGATAACTACGTAATTTGTTCTCCATTTTAGATGCTGACTTTGATCA
ATTTGGGTTACTGAGAGGCTTGAAATGAAACACTAGGGGTAAAATCAACA
AAGAGAATAATAGGAGAACAGAGAAGTAGAAAGCAAATTCACTTGATTGT
TCAACGAAAAGCGGTATGTGCATTTCATCAAAAGACTACAGAGATTAATC
TATTTTGTAATCCGACACTTTGAAGTTCAGTTCAAGAGTTTGTTCTTAGA
CTCCTCAAGGGAAGCTATCACAAGTTGATGTGAAAATCTGTGCAATTCTT
TTTACATTTGTCATTGTAATATGGTCAATTTGTCTTGATCTGCAATCAAT
GGTTTGTGTACCTGTCAATAGTTCGACGATTGGGGTTATTACAAAAATGT
CATAGTCTTGGTTTTACGTCTTTGGTTTATGATTACCACAAACCCTAAAT
GACATTTGTTGGTTTCGCTGACGGCTTCCATCTTTAATACCGAAATCTTT
TTGGTTAAATGTTATGGTTTTCCATAATACCTCTGGATATGACTTTTTTT
ATGTTCTAGCTATGATTTTCAGTAAGGGTGTGATTTTCAGTAAGAGTGTG
ATTTTTAGTGGATATTTTCTACTGGTACAAATGTAAAGTATCATCTCAGG
TAGACGGACCGCAGACTAAGGCATATTGTTGTTCAATTGTAAGATGTACG
TAATTTAGCAATCATGCGTGTACATTAAATGACCTCGGGTTGTATAGTAC
GAGTATCGATTACAAGGGTAATTAAGTCTATCATTTAATTAGGATCAATT
TACAATAAAGAGGTCATATTTTCTGAGATTGGGAGTTATTTAGATAAAAA
TGTGTTGTCTTCTTTAGTTCTCTGTCGTTTCGTTTTCCTTAGAAGATATC
AAGAAAAGATCAATTTTTGCAAAGTAAAATGTTTTTATCAGCAATTTAAC
CTAACTCTTTGTGGCACTTCCAAAACGACGGTTAAATTCAAATTTTGAAT
GTTTCTGAAAGAAAGAAAAAAAACGATTTATTTTTACAAAGTAGCGGTTA
GGGTTTGACACGAGTCTTCCTGATTCCTAACCCAAAACAAAACTCATTTC
TATTTCCTTCCAAAAGCAAAAGAATCAAACTGTTTTAATAAATCGTGTTT
TATATTAAATTGTAACACGATTCGAAATAAGATTACCCTCACAATGCTAA
AAGGGATTTGGGCCGTATTGTGTCTTTTAGGTAGGAAGACTAAAAAATCA
TTTCGTTCTTGTAAAACCATTGACGCTCACATTTTGCAAATGGATTTATT
TTACAGTGCGCGTGCAGACATAAACCCTGACATCATTTTGCAGTTTTAAA
AGGGATCTTACGCTCATCAGAGAAAGTAAAACCATTTAATGCGAGAGCTC
GCTCGTTTCATTTTTTGAGAAAGTGATAGGGTGTTTTGAAACAACAAGGA
GATTGTATAACGCGTTTGGTTGTTTGACAAAACACGGAAAAGACTTTGGT
TTTATATCAAAATTCATTGACTTTGTATCAGTCACTCATTACAGAATATT
TTCATTTTTTACAACTTGAAGCTGGTGACCTTAAAGGATATTCTCGAGGT
TTTGATTTCGTTGGAAAGAGATTTTAAAGAGGAGATGGAAGCAACCATGG
GTTAGTGTTTTAAACCTTTACATCAGTACTCTTACTTTTATTGGTATCTA
CTTCTATTGGATTCTCAAGGGAATCTTTTCTTTTTTCTTGTTATAGATAT
AAACTTTATCTACATCGTAGATAAGATTTGCGCTCAATTCTTAGGACTTC
TATGATTTTCAGTTTTTGTATTCCGATAATTTGAAGAGAATGTAGGTTGA
TCTTTTTTGTTGAAATAATTAACTTATAGCTTGATATATTTACTTAACAG
TCTGCTAAGTATCACCATGTTTGAAGCTTTTAATGCTTTAATGATTCTTT
AATGACATCTTTCATCATTTTACATTCGCTATTACTGACTAGCTCTGAAG
CAATGTGGTGTAATTTGACTCTCAAATTCTTTTTTTGAAGATTTTTTTTT
AAATCAAAACAAACAACTTGGCCGTTAAAATAGTTTTAATGCTTTTCCTT
TGCGTCAACACTTATTCTCTAACTTTCGCTTTTTTCATAATCCTTGTACT
AAATCAACAGATTTAAAGCGAGAATCCAGTGAAAATTGGCAACCGACCTT
TATACTCCTCTAGCAAGAAAAGACATAGAAAAGCTTAAGCTTCGAGTGTG
TTCTACTCGTCAATAAAGTCTTGATGCCTTTAAGTTTAGAAATAGTAGAA
ATCTGAAAGTCATACATATGTATATCTGAACCCTAGATAAGACCAAGAAT
AGGATACCTTAAATTTCGCGAATTTAGCGATAGATGAGAGTTTGAAAATT
TTCGCGAAGGATTATATTTCGCGAAAAAGGCGAAATTCGCGAAAATTCGT
GAAATATAATCCCTGCGAAAATTTATACCCTTAAGGTAATATGGACTTAA
TTGAGATTGGAGCTTGAGTGACTTTTATGGCGTTGTTGTTTCAGATGTTT
AAAAAACTCCATAAAAATTTGGGACACTTTGTTTTGATATGCTGAGATCT
TTGATGATATGAGTGTTTGGGGTTGTTTGTAAATCTTATGACAGCCGGAT
ATCCAGGATGAGTCATCGACAAACCGAGTTGCCTTTCAGTTTAACCCCTG
TTTGTTTTGTACTGGTTAAATTTCTTATCCTTCGTGAAAAAAGTAAACAT
CCTAGGATTTTCCGCTTATAGTCTCCATTTTTGATCCATTTGCTCCTTCC
CTAAATATAATAAGGAGGCCTTCTTTTTCATATTATGTTCTAGAACATTC
TATTTTGGTTGGATTACATTAAGAAAGTTTTTCTCTTTATCATATGACGT
ACCCTTATTAATTTTAATCATCTATATAATTGTGATATCTTACCTACAAT
ATCCTAGCCTTCGTTGGTTAGGTATGATTTTTTAGATGATAACGTACGCT
TGTATCTAAAGTTCCCATGGAAATTGTGTAAAATAATGGCTAATCTGGGA
TTGCTACCCAATAAACTGTGAAAATTGCCCTATTTTGACAACACCGCTAA
TTTACTGTTTTTCTATCGAATTACAACTTCGAGAAGTTCTCATATTTCAT
CACAACTCTAAAAAACAAGGTCAATTTTATAGAAAAAAATGAACAGAAAT
ATAGTGCGGTAGCGTTAGAAGTATCCTATGCTATCTGCATGATACTTTTA
AACCCATTTTCTCTATAGATTTGCAAGTTCTATTAGACTGACACAGAATG
TTTTCTCGTGACATTTAGTCCAGCTCTGTCGGTGGTGTCTGTTCAGCATT
TTGAATTAGGAGACTGATTTGTCAAGAAATGAGAGCAATTTCAAAACCTT
GGTTTTTGTTCTGGTAATTCGATTACTTAGATTTGCAAGTGAGATAGTGG
AGGCAACACGAACGGTTCAAAAAGGCTAATGAAAAGTCATCGCGTGTTTT
GGGTGTTTTCTCAAACATGAGCAGTTTATCTCTTTCGTTCACTAAATGTT
AAACTTTTAAGCTGCGAGGATTTGTAATTTGTAATGATTCGGGTTTGAGC
TGTTCTTTGTGTGTTAAAATATTAATTTGTTTCCCGTAGACTTTGGTTTC
TTTTGAATCGGTTTGTAACCTTTCCTTGCTATATTTAACCATCGGGTTAT
ATCTCTCGATAATCCTTTAAGACTGATCGCTTCATGAGGGAAGAATTGTG
TATTTTGAAATTTGAAATAACGGTCATTTTTCCTACACCACATACAAAAT
GACATACAGTATGACTGGAAAATGTGAAAGAAATTTCTACAAGTTACAAT
CTAGCATCAAAAAAAGAATCACAAATCCTCGAGTTCCGTGCTACACCTGC
CAAGGCTTGCGCTAAAAGCTACAGAAAAGAGATATCTATTTCACTTCACC
CTGATGACGTCAAATCTCTGTAGTCATTGATTTACAAGAAAAGCGAAACC
AATCATCCAGTGACATTGTAAGTCCTAACCTAGCAGGTTGTCTTTCTTAA
ATTACTTGTGGTTTCTTGGACCATCCTTACGGTCAGATTTGAGTGCTTAC
ACGTGTCGTCTTAGTATAGATGTACACGTCTTTTTTTTTTAAGAAACACA
CTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTAA
GAAACATGCTGAGGCTGAGAATGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTTCTTAAGAA
ACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAAAGACGTGTA
GATTCCATTTCTGACATCTTTAAGTTATACAAGCATGAAGACGAAGTTGG
TGAACTGTGATCTTTGGAAGTTAGGATAGAATAAGTATCGAATCAAGCAA
AGCCGATGAGATATGAATTACAACATGTCATTTGTGAAATTTTGTAGGCG
TTTAGTTAAGAAAAGGCGCCTTACAAAGGGAGAGTATTGTCAATGATCGC
TTCCTGTTTAGGGTTTAACTACCATAGCAAAATGAGATTAAATTTTATGT
TTTGTTCCTTGCTTGTCTTTTGATCCTAGGTATGTTAGCTTCTTTTGAAT
CCTGAGTTCTCCTTAATGGGTTTATGCCATAGACATTGCTGAGGTTAAAT
ATACCAGGATAATCACAACGACGGATGAAAGATGTAATAGGCTAGTGAAA
GTACGAAATTTGATTGGTTGAAACTCACTAGTCTGTTAAATTTTCGTTCA
CTTCACTATTATCTGACAGTGGATATGGGAATCGAGAAATGTCAAACTCG
TGCAGAATTTAGGATGATTAAATTTCTCGCAAATACAAGGAGGCTAGCTA
TCTATTTATAGGATGTGGTATTTTAAGCTGTTTATCCAAAGGACTTATCG
TGTATTTGCAAAAAAAAGGTTGCTTTGAAAAAAATTGAAATTACTTTCAT
TTGAAATGTTAGTATGACGGTCGAAAATCGTTCTACTAACTTTTTGTAAG
GAGCATTACGAGGGCTGCTTGTCTGATTCATTGGGCTTTATGTAATTGCA
AGAGCTTGATTTCAAGTTTGCTTGACCTACCCGTTAGATCGTATTGTATA
TAATTGACATGACATTATTCAAATGTCGATGCTATGAAATACATAGCTTT
CTTTTCTGTTCAGCAAGGAAAAATTTCTAATTTTGCAATCAACATTTTTT
TGACAAGTTCAAAGATTCTTTGATAACAATTTTCTAGAGCATGTGTGAAA
TTATTTTTCTTGCTTATTAAATTGTCGGATGAATATATTGCTTTTGAAAT
GAATGCAAGAACATTTTGCAGAACTTTCCTTGAAAACTGAATTACTCTTT
CAACTGAACAAAAACATTGTCAGATAATATGTATGGTTGACTTTAAAAAA
AGTTGTTGATTTGTTGATTGAGACAGCCTAAGACTCAAACTCACGAACTC
ACTTAACAGGTCTTGAGCCATGTATACAAATGTTCCTCGTCACTTACATT
TGCTGAATTCTTCAAACGAATTTCAGAAGTATTTGAGGAACCTCATCGCA
TATTTTCTTTTTGTATTTTATGATGTAATCGTTCGTTTTTTTTGTGCTCA
ACCGCTTATAGGCCGTTATAGCCCCCTCTCATAAGTTATCATGACCACAG
ATTGATCTTTACGGTGAAAAGTTAAATAAACTGATATTTAAGTTATCGAC
TGAAAGTAGTTTTATCTTAGTACTACGGCTCGCATTGATAACCAAACGTC
AGAAGCTGACATTGGATTTTTGGACCTACCGGGAGGTCCTTTAATTTGAC
CGTTGTCCGTTCGTCTGTTACAAACTTTTCTCGGGATTGGCTCATTAGTT
TTTTTTAATTTTTTGCACAATGATACAAAATGGCAATGCCTGAAAAGTGA
CGGAGCCCGATTTTTGAAAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGAAAATTTTTTTTC
GTCGTAAAATACGAATTTTCTTTTTTGGGGGAAATTCTGTTTTACCATTT
TCCTGTTAGCAGCTTTTCTCGGGATCGGCTTATTTTTTGTTTTCATTTTT
TGCACAACGATACAAAATAGTAATGCGTAAAAAGTGACGGAGCCCGATTT
TGAAAAAAAAATTTGGGGTAAATTTGGGCCAAAAACTACCTAAAAATAAG
GTTTTTTGGACTTGGTGCAAAATAGCTTCATTAGTTTTTCCTGATTTTTG
TCAGAAAGATAGAGTGCAAGGTACCTTAAAATATGGTTGAAGTAATTTTT
CTCTGAAAATTTTTTTTTCGCCATAAAATTTTCTAAAAAAGACGACCAAG
TTACACAATGATAAAAGAAAATAAATCAGACTTTTTTGCATTGTTCTAAA
ACTTATCGTGTTTGCTCAATACCAATAGTAAAATGTAGAATACCTACTTT
TATCTGATTTTGATCAACAGGTAGGTCCATTCAGCATGTTGCTTGTTTTT
ACTTAAAATGAGCGAACTACCTCAAGTTTAAAAGAGACTTTTAAGTAGGC
AGTTCCTACTCAGAACCTAAAAAATCAATGAAGTGTATTTTTTCTTTTTT
CAGAGCCAAAGAAATTTGATGTATTGCGACCACCAACAAGATGGGCAAGA
TGTTGAGATCACTCATCTTCAAAAACAAAACATCCAATCTTTCCATCGAA
GGAGTCAACAACAAAAACGAAATTATAAAAAACACAAAAATAACCGATTT
AACGGTATATTTCAAATCCCTACAAACAAATCCAGTGAAATGACAGAATC
GATTGGGATTTATGAACTGACATCCACTGAAGCAAAGGAGACTTTTGGTG
AAGAGGGAACTTGTTTTTTCGTCGTGGCAAATATTCCTCAAGATCGCTCG
CGAGTTGTCTCAAACTTTATCGAAGAAAATATTCCGGTATCTACACATAA
TACGGTTATCCCGCATTCTTTCACCCGGAAGAACCCGCATTTGAGTGTTG
AAACGAACGACCATTCGGTGTCGTCGGGNGCGGACGAACCCGCATTTGAG
TGTTGAAACGAACGACCATTCGGTGTCTTCGGGTGTTGGTTCAGGTGAAT
CCAGTGAACTTGATTCACCTAATCCCACATCCAGTGAAATGAAAAGTTTA
CATCATCGATCATGTAGTATTGATAGAAATCGATCAACGTTCGAAGATAA
TTGTTCTTGTCCTTCACAATCATCGAAACCTTTTCACAATCAGACTTCTA
TTTCAAATGATTCCGGATGTTACTCCATGAATTCGTCTATAGCTCAGTCA
CCTTTGCTTTCTCCGACACAATTCTCAATGCAAACTTCACAACAAGAAAA
ACAGACAGACCAAACGAAAGAGATTTTATTATGTCGAATTAAAAATCAAC
TTTATGATCCGAAAAAAGAAGAATTACTCGAACATTTAAAACGGATTTTA
TCTGATTCAGAATTTGAGAGTTTCACAGAACAAACATCGGACAAATCGGA
ATGGAAACCTTTAGAAACGGACGAAAATCGGATTATGCTTCCCATGCGAA
GTGCTTTAAAGAAAACGAAATTAACTTTACTGGAAGAAATCCAGGCTAAA
CATGCGTTGAAACGAATGGAGGCTAGACAGGAAACTCGTACGGTGTGCCC
ATTAACGCGGAGTGAAATTGTGAAAATTATTCATCAGGTACGCTCGTGTT
TACGATTCACACAAAAACCTTTTCAATACAAATTTCAAGTACATCGGAAA
ATCAAACTGAAAGCTTTTCCACCTTTTGATAAAGAAACGACTGAAAAGGA
CTGGGAACGAGAGAAAGTTCACTTAACGTTATGTTGTAAGAAAATGAAAG
ACGCTTCTGGAAAAGGAGATATCAAAAGGATATTAAACCTTCTAAATACA
AACTCCTGTCAACATGTCAACGGTAGTGAATGCCTTAAAATGCCAGCTTT
TCATGACGCTTTCCAGAAGCAACATTACAGGACAGCTATTCTTCTCTTGG
AAGCCGGTACTGACTTACAAAAGTATACGGAACAAAGAATTTCCGAATTT
CATCGGATGCAAGAGATTGTTCAAAAGAATAAAAAAGATTTTGATTTATG
ATGAAAATGAAAGAAGAGAAATATATTTATTTATTTATGACCGAAATCTT
TCTTTATCTTTGCAATTTCAATTAATAAGGGAATCACCCACCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011048TCONS_00011048Clytia hemisphaericatranscript
TCONS_00011047TCONS_00011047Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011047-proteinTCONS_00011047-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:433282..442575 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4	0.49	0.38	0.44	1.61	0.98	9.12	9.85	6.66	4.34	4.32	5.66	7.1	7.07	1.34	1.49	21.67	27.28	9.98	7.7	7.39	5.63	4.21	4.65	3.79	4.36	0.7	0.63	1.12	0.74