XLOC_006379 (gene) - C. hemisphaerica

Overview
NameXLOC_006379
Unique NameXLOC_006379
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:100973..106946-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006379 ID=XLOC_006379|Name=XLOC_006379|organism=Clytia hemisphaerica|type=gene|length=5974bp|location=Sequence derived from alignment at sc0000127:100973..106946- (Clytia hemisphaerica)
TTATTTTTCACTACACCATGTTTGCAAAATTCGCAAAATTGCTTTCTACT AAATCAAAACATTTTATTTTCAGAAATAATTTAAACATTGTATTTATGTC TTTGTTAGGTTTCTAATTACTGAGAAAAATGTCCGCTAATTTTATTAGGT CTCTTGGTAATATTTTGTAATTCATTCATGACACAGTCTTCCCAAGATTC GTTTGGAAAACTTAAATACTTACTTTTTTCTTTTGTTTTAGATTGTCGGC CAAATTGCAAGGTAAGATTATCAAATCTAACAATTTCCCGTACAATTATA ATCTTTGAGCATGAAATTATTTCTAGTTCTTCTCTAGTTATTGTAGAGTT TTCACAGTTAGGCACACACTGGGACTCTAACCCGATTGTCTTAAAATCAT GTTGTTTCCGTAACTCCTCGAAAATTGCCAGAATGCCGAAAACCGACATA AAACGGGTTTCCTTCATTTTTTCTCGATTCTTACTCAACAAATTTTCGTG AGTTTTTGCACAATTTAGCAAAATGTGACAGAGCCAGCCTGATTTCCAAA AAAAGAATCTTTTGCAATCGCCAGATCCAGCAATGTCAATTAGAAAATGT TTTTTGGGATTTTCTCATTAGTTTTCACTGTTCTTTTGTTTTGTTTTTTT TAATTTATAGTTTCTGTTGAATAGCAAGGAAGGTCTATAAAAATGTCACT TGTAAATAATAAAATTCTAAGTTGAAATTCTTCTATTCTTGTCTTTAGTT TGTGTCAACAGGCCGTGATACAGCATGCATCAAAATATTGAAAGAAGTTG AAATAGGGGAAGAATTAGTTTGTAACTATGGGGACGACTTCTTTGGGGAT GATAACTGTTTTTGTGAATGCATCACTTGTGAGAGGTACGATAATATACC ACCATCTTATGTTAGGAATTCATTTAGTTGAGAACCTGTGAGAACTCCTT TTTTTATTTATTTGGAACAAACATTGCAAATTTTAGGTCTTGCCAAAAGA TATAGGTGAACTGTAATCAAGCTTGTAAGATTCAGAAAATTTCAAATTCA TTTTAATGGCAGTATATTACCTTTGTCTGTTTAAATAAAGGACTTTAATA AATCACTATTTCGTTAGCCAATAAAGGGATCAAACTAAGCACATGGCGGT ATCCCTCGAATTTTAAGGGGGCACCCCCTACTGGAGAAAAATGCACATGG CTCTGATCTCCAAAATTATCAAAGGGGTAATTTTTGCAGGACTTAATTTT GCAGATAAGATTGTCGAATACAATATTTTGCAAATTCAGTGTCAAACTCA CTGTTGATATTTATTAATGAAAACCGCTAATTTGCACTTATTGACACCAG TGAGCCAGTGATACCAGTAATAATTTCTTTTGAGAATTTTACAAATAGAA ACCACCTGAAATCCAAAATATTTCATCTTCAATCCTTTATCTCATTGAAG TAATTAATTGGTGTTGTTTCTACTCAGGCGAGGAACAGGCGCATTTTCGA AAGNAATTAATTGGTGTTGTTTCTACTCAGGCGAGGAACAGGTGCATTTT CGAAAGAGACAAATGAAGAAGGTAAAGAAGAAGAAAAGAAGATTGGGAAA TATGGTTTACGTGACACTGACAAACGAATATCCAGGTTGAAACGCTTGAA AGAAGGTCGGTATTGACAACCCTGTAAGGGGTTTGAGAAAGTCTCAATTA TTATTGGGCTTTTAGTCTTAGGGGGGGGCTCAAACCTTTTTACCAAATAG ATTTATCATTTTGTGTCATTTTGTGTTTTTTTGCTTGCTTTTTGGACCTA CCACCGGTGGTCCTATAAATTAACCCCTGTCCGTTCGTCCGTCCGTCTGT TACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGGAC TATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAG AAAAAATTTATTTGGGCAAATTTGTGCCAAAAACTACCTAAAAATAGGGT TTTTTGGACTTTGTGCAAAATCCTGTGATTACTTTTTTCTGATTTTTTGT ACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTATTTCC CGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAA TTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTTACTCATT ATTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATG TGTCGGAGCCCGATTTTCGAAAAAAAAAATGTTTGGGGAAATTTGGGCCA AAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTATCAT TACTTTTTTCTGATTTTTTTTACAAAGATGGAGGGCAAGATTCTCTAAAG AATGACTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAAANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTATTCGCCTTAAAAG ACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATAT AGCTTTTCTCAATGTTGACTCATTATTTTTTCAGATTTTTTGCACAATGA TGCAAAATAAAAATACCTAAAATGTGACGAAGCCCGATTTTCAAAAAACA TTTTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACTGGTTTTTT GGCATTTTCTCAAGATTTTATCATTAGTTTTTTCTAATTTTTTGCTTAAA GATGCGTATTAACAATGCCCAAAACATGGGCGAGTTCAATTTTTGACAAA AAAAATTTTCCGGTTGAAAATGCCAGAAATCGCCGTGTTTGCAGATTTTC ATTGGATTTTTTCCTTATATTCATTTCTATGTTTTTTACACAAAAAAATT ATTGATAACAATGCTCACCATCAACCATGATTCAATTGTCAATAAAACTG ATTTTTGCGACCAGAACTTTCTATTTATTTTTTCCCTACAACCCTTCCCT CTCCCCCCATCAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNAACGCTATATTTTCTGACTGATTTTTTTTCATTTTT CTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCAT CTAGCTTGTTTTGTTTCTAGCGATATGTTCTTTGAAAAGAAAAATAGTTT TCAGTTTAAATAGCCTGCTATATTTTGATACTGTAGTCTTCGGCTGTTAA CAGTTCCCTCATTTCTTTCTTTTAGAAGTCTCAACGGACGAAGAATCACT CAGTCAAAGTAATTCTCCAACTTCATTTAGCAAGACCTACTTGATGCGAA CCAGGAACACCTTAGAACAGAAGAAAAAACGAGAAGAGAAACAAATCACT GCTGAACTCAAAATGAAATATGGCACATACATTGATTTAATACCTGACTT GAAAGACCTTCCATATTTTGAGTTGCTATTTGTTGAACGCGAAAACCGTA ATCGTCCTGTTAGTATTCCAATTATAGATAAAATGAAGGCTAATGAACAA ATGCCAAAGAGATTTTCACTGCCTTACGGGAACAAGCCAAGTGGTTCTGG CGGTACGAAAATGGAAGATCGTGTGAGCACTTTGAAAAGAACTTGGTCAT CTAGCAATATATCTGAAGTTTCAACTTCTAGTGCTGATACCTCTGATATT GATGACGACTCTTATGACTACCACCGTCGATCTCCTTTAATAAGGCGTGA ATTCACATCCTCTGTTTCCAGCGAGAGCTTGAAATTGACAATTAAACTGA AACCGACAGTGACCTCCCGAAACAGAAAAGCGTCTTCCAGCAGTGAAACG TCTGTAGAGTCTTCACACAGCTCATATCAAAAACGAAAATCGATTTGTAC CCCGAAAGGAGTTCGCTCGTCCGCAAGATTAAGATCGGGGTTGGTAAGAG ATCAGGTACCAGATAGCTCTCATTCCCATTCATTTACCTCCTCAAAGCAC CACCACCATAAACATTACACCACTTCTTTGTCTAAGCGAAATCGTATTAT CATCCAAAAGAAATGTGCTTGTTGTCATTGAGAAATTACTGTAATTAATT CACGTGGATCTGTGCGTCGTAAGAGATTTCATTCATAATTGGCACTTTAG TTTACTATGATGAGGTACTGTTTATTTTGTCGCGCTCACTCGTTTCCAAG AAATGGGAATCTTATCACGAAAAGTGAGCTTGTATTTGTCTTTGGAAACC ATGTCAATAACGAGTGCACACTTAACATGAATACTTCAATAGAAAATCAA AATGATGAAAAAGGAAAACATTAATTTTATTGGTTAAATAGTATATTTTC AATTTCTTTCCCACTTCCTGATTTTTTGCAACACATGCGATGATATTCAC TTTTAGGGTTTTGCTGTACAGCATTGTTCCTAAGGTATTTTCAGCTTTCT GATGTTTTTTTTTGGAGGGGTCGATCAGTATCGTGAATGTAGCTTGAAAT ACATGGGGATAAGAGACGTCGCATCAAAATAAAAAAGCTTTAAGTCCATT TTTGTTATTTTTCCTTAAATCCTGAAAAACCATTAACATTTGAAATATTT TTTGTGTTAGAAAAGCCATTAGTCCAAAATTGTTTCCACTCTGGACTTCA GGCTTTTTTGCCCTAAATTGATGTGAATTAAAGCTTTTTTACCCTGAAAA TAAAGTGAAAATTCTTATTTTTCTAAAAGCTGTAAATTAGGCCACTTTTG GTTGGTTTTTGTTGGATTTGAGCCAAAAAATCGACAAAAAATGGGGTGTA AAGCATCGGTAAGGTCATAACTCAATTTTCCAAAAAATGGACTTAAAGCT TTTTTATTTTGATGTGATGGATTGGTGAATAATCACTTTTCTATGATCAT TTATTTCGCTTGAACTTTACCATATTTTTTGACCTTTTTTATTTTTAACA ATAGCTGCCTACTCCTTGCGCTTTTTCCAACAAAAATACCTTATGGAATA ATCCCTCAAAATTGTTTCTTTTCTCCATTCTTCCCTTTTGGCATTTTCTT TTCCGTACTTACTCTTTTATTTCTTTTTTTACTTTAAGTACAACTTTTTC ATCTAGTTTTTATGGATAAAGTATTTCTATCGAGACTACTTTTATTTCGT CGATTATATTACGAGGTGTAAACAAATCAATTTATGAAACTTCTTACCTA ATATTTATTTTGTACAGTTTATTATGATGCATTATTTTACAATGGATAAC ATACTACTACTATAATTATATAGTAAAGCAAAATTAAAGTTACTTTTTTT GGGAGCTCAAATCCGTTCCATAAGAATTGGCAGTCTGCACAATTTTAAAT ATTGCTCTTGAAGGAGAATTATATTATTAAAAGTAATACACGTTTTTTTT TTATAAGGAACCTTAACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTACA GAGAATTTCAGTCTCAAAGTTCCTTATCGTGTTCCTTACTACATAGGAAA TTTTGAACTTTTTGCCCCTTGAAGGATCAAAATTTGGTCAAATTAGTCCC ATTATTTTACATTATTTTCAAATCCACTTATTCTCAGCCTGAGCAGTTCC TTAACAATTCCTTATTTTTTGAACCATTTTCAGCCTCGAGTTCCTTATAA ACGTGTTCCTTATAATAAAAAAAAAAGTACCTCGTTGAAAAGGTCATCTT AAGCGGATCATTTTAAGAGTTCAGAATTATATCTTTTCTCCTTCAAGACC AATGTACACGTGTTTTTATAAAAACATCCAAAATTTTTGAAGCCTTCGGA TGTTCTTAACTTTTTGAGTTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011377TCONS_00011377Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011377-proteinTCONS_00011377-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:100973..106946 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.21 20.31 4.27 2.03 14.98 11.66 15.48 15.99 7.6 9.47 8.95 8.37 8.91 9.78 7.46 8.72 8 9.27 9.03 8.56 8.71 8.95 30.55 30.27 11.46 12.4 8.87 8.31 24.36 27.08