XLOC_006668 (gene) - C. hemisphaerica

Overview
NameXLOC_006668
Unique NameXLOC_006668
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000133:414858..418467-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006668 ID=XLOC_006668|Name=XLOC_006668|organism=Clytia hemisphaerica|type=gene|length=3610bp|location=Sequence derived from alignment at sc0000133:414858..418467- (Clytia hemisphaerica)
ATCTTAATCTTTCAAAGCAGCTAATTTTTTTGAAAAAGGCCAAAAATTTC
ATCATTTTTTTCTGAAAATTTTTTCTTTCAAAGGCAATTTCTCAACCAGG
ACAAACGATTCAGGTATCAACTTTGGTATAGTTGGAAAGCTCTTTCTCTC
AGCTACAAAAAATAGCGGATTTTTTTCTCTGAATCTCAAGTGGTCAGGAG
TTATGACCAAAAGACTGTGTATCGGTAGAATGGCCTTTTCAAAACGTATA
TATACGTATTCTGGCTTCTAAGGGTTAAAATTATGCATATTCTAAATTCC
CTAGGACTGTTAAAAAATTGAAAACAAATGAATAATAAATAATAACACTT
AAAGAAGAAACTTTACCGGCAGACGAAAAGAAAACATCAACAAAAATGGC
GTTAAGTGATGAAGACTTGATGAATGTGATTATGATACCGATAGGTGTCT
TTGTCATCATTGTGTTATCACTATGTGCTTTTTGCTGTCTCAGAAGAAGG
TAAGATTTGCCAAGAACCTTAAAACATGATGTTTATCTACTTTAGGTGTA
CAAACTTTCGCGAGCAGAAACTTACACGAATTTTGGCCCTTTTCGCGAAA
GTAAATGTCTTTAAAAATTCTAGGAAGGGCCATTCGCGATAGTTTATGCT
CGCGAAAAATTCTTGACAAAATAGAAAATCTGTAAAACTTCGAACTTTGA
ATAAGATCTAGCTTTTATGACACTTTTTAGCCTGCTAAAAGACTAATAAG
TCAAAGGACAAATGTTTCAAGCCAATCCAAGTAGTACTTGTTCTTCTAAG
CCATATTTTTTTATGTAAAAAATCTCAATTTTACGTCTTGATTCGTGAAA
GTTTATGCTCGCGAAAAATATTTTTTCGTTAAATTCGCGAAAGTAAATGT
CGTGAATTTCGCGATTTTTCGTCCTCGCGAAAGATTCTGCTCGCGAAAGT
TGTACGCCTAAAGTACATTGAGCTCACAAAATTTCTGTCCTGAGTTACCG
TACGAATCAATAACCACCCGTACTTTACATGAGCATTATCTTTATGCCAC
ATAGGCGGTTTTAGACCATAACGAACTTATCAGAAGAAGAGATTTGTAAT
TGTAATTTCATTGTCTTTTAACAAGCATTACACTCCTTCGCATGTTTCTG
ACGTACTTGCTCTATTGTCTTAAATCCGCCAGTGCCAAGCCACAATCAAA
GTCAAAATATTTTGATATTATTTTAAGAACCACACACGATTTTTAAGTGC
TCTAACGCTTCCGAGGAATGTTATGATACTAGATTAAAGACTTGTAAAAA
AGCTAAAATACACTCCTGTGTCACAGATCCACTGGGACCCCTACCCCACT
GGAAAATTTGGCAAACAATTTCGTCCCTGGTGGAAAAATACCCTGAAATT
TCAGCCCCACTGGGAAATTGACATTGATTTCACCCCCATTCAAAATTCAA
TGTTTAAAAATTGCATTCCAAACCCATCCCCACTGGATTTTTTAACCGTG
GAACAATAGAATTTCTATTCCCATTGGAATTTCAATAGGAGTTTTTATCC
CCACTGAGGAAAAAAGTTCCTCCGGGGCTGTGAGACAGGGGTGTTGAAAT
GTTCAAATAGTGAACATGCGATGTACATAAGATTTTACTTGTATGGTTTG
CTTTGTCAAGACATGTACAGGTCTACGGTATCGCACTTTACGGTCAAAAT
AAAGCCGTGCTTAACCTCGCTAATAAGGTTGAGAATTGTAGCCTGAAAAC
CAATAAACTCCTCCCAATAAAAAAGTGAGGAAGAGTACAAAATCGCCATC
TGACTACGTGACGAGAATTGGTCAAAACTCGTCACTCATTTTTCTATTTT
CTTTTTATGATTTTTCGTCGAACAGTCTAAAATTTTGTTTGAACATTAAT
ACGGAGATGTACACATACCAGATGCTACAATTTCGGTCAAATTACATCGA
GAATTTTGGTTAGTTCCTCGTTTTTAAGAATTTAAAGTTGGGGCGAGAAA
GTCGCTTTTTGGCTATTTGTTAAATTTTATCGAATATTTAAATTCGGGAG
GGGTTTATAGACTTCTAGGTTATATTCTGAGCACTATTGGACCATCCTTG
AACTTTTGGATCCTCAGATCTTAAGTCTTAATTGTCTTAATAATCTTAAT
TTTAAAATTCAGACTTGAAACTCTACCCTCCCAACCTAAGTTAGAGCGTT
TCCAAACCGTTTGTTGCTATAAGACTTCATGGGAATTTCCCTTTTTTCTC
AAATATTGTGACTTTCATTGTAGATTTTTTTGACTAAAGTCAACTTTTGC
TAAAAGCCCTCAACGATTACAATATTGGGTAACCACTCAAAATTCTTAAA
TTTCTCTTTTTTAAGAAATCGTCAACAAACATCTCACACACAACACAAAC
CAAAAGTGAGCAACAAACAAAATGGAATCACTAACTACAAACCACCTCAA
CAACCAACCAAAATATCTCAAAATCGTCACGAACCTATTAGAGAAACATT
TCGTAAAACAGTACCGCCTAGTGAAATAGAAAATAACTTCCAAGAAAATG
GCCAAAGCAACAACAATAATGGTAGATATTGTAAACAAAATGGTATTTAC
GGACGTGATGAAGATCATAATAATGGTGTCGTTCAAAATGGTAAACTTAA
CAATGGATATAAGACAGACAACGAGGGCACTGAAATAATGGATGAATTTG
GAACTATTTTTGATGAACATATAAAGGACCAAGAATCAAATCACACGGAT
GAAGCGGTCGATGAAAATGAGCGCGCGACAAGACGAAGTAAAGGTTCAGA
TAATAGCACAGTCATTAATGTATCCGATGAGAAAATGCGTTCTAATATAG
AAATGGAAGATCTTGCATCTCCGATTAAGAACTCGAACAACAATGATTTG
AATGAAACAATAACATCTGTAAAACATGTCCAACTGAACGAACGAGTGTC
AACCCCCTTGTCGACTAACGGAGACGGGGGTAACAATAATGAACTTGGAA
CAGTTATTGGCAGTCATAACCAACCAACTTATGTAGACAGTAGTTGATGA
GTCGCTTACTCCATTAAAGGTTAAATTTGTCGTCGAAGCTTCTTAAAGAA
GGTGATATTCACACCTTTGTTTACCTTCGCCGTCTACAGATATCTCAATA
CGAAATACTAGATCGAACTTCTTTATTTTTCGTATGCAAGCCACGGCAGG
TGAAACACGAAACAATACGCCATATTTACTGAAAGTATAAACACAGTATA
AACCTTGATTATCGCAGTGCTTAAATATTTTGACACTGTATTGACTTGAA
TTTCAAAGAACGCGCAAGTAAATTAGGACGTCACTCTATTAAAGATGGCG
CATGCTAGTTTCTAGAGTCCAACTGACTACGGAGAAAAATGAGTATCTTA
TAGTAGTTGTCATTTTGTAAAATATTTTGTTGTTTGTAAAAGATTTATGC
TAAATTTTTGTATATTTATGGTTTTATCTATCAAAAGTGAAAATGTCATT
TAAACAGAATGATAATCAATTTCTACAAAGTGATGCGAATATTAGGAGAA
TAATTCTGATAAGAGCTTTAGTGGTATCTAGGTTTCAGAGACCCAAGAAC
CTTTTAATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011879TCONS_00011879Clytia hemisphaericatranscript
TCONS_00011878TCONS_00011878Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011879-proteinTCONS_00011879-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:414858..418467 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.28	1.44	0.66	0.51	5.06	4.21	10.65	11.19	8.72	7.86	8.82	11.29	4.71	4.64	2.5	1.74	2.44	3.73	6.59	9.83	5.88	5.75	2.32	3.42	2.19	2.47	0.67	0.29	3.9	3.23