XLOC_006705 (gene) - C. hemisphaerica

Overview
NameXLOC_006705
Unique NameXLOC_006705
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000134:267534..272534+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006705 ID=XLOC_006705|Name=XLOC_006705|organism=Clytia hemisphaerica|type=gene|length=5001bp|location=Sequence derived from alignment at sc0000134:267534..272534+ (Clytia hemisphaerica)
AGTTATTGGTTTTACATACTAGAATATAATTATATACAAATGTTGAAGAG AAACCCTGGTAAAAGCAACCAAGAGTTACATCCTGACGATCTGATTGGTT AATATTTGATGACGCCCGCCTACGTCAACGATCTTGTTCgaccaaatttc ttttcttctcaAGAAGTGACGTTAGGGAATGTGACGCAGTTTTCATCATA CAGCTAACACGCAAGAAGTCAAAACGTAACAAACCGAACAGTAAGAATTC ATTATACTTGTATACTGTATTTGAACCTGAACGTAGAgattttgtttgtt attttttggaaagaaactTCTTTTTGTAAACCTTTCAGCATTGGTTCTTA GTATTGAATTAAATTTGAGTGAGAAAAAAGCGAAGACTAAGGAATTATTA TGGTTATATTAGGTAtgcttttttaaaatttttacttcaattAAACTTTC AAATATATTGTGAATTTATTGTCTGATTGGTTTAATTATTTATTATATCA GGTATGGATGTTGCACAAAGTGGACATGTGTTCCAACCACCTATGGGACC ACCTCCGAGCTCTCTTAGCGAAAAGTCAGCTATTTTGCAGCAGCAGTCGG TCATTCAAACAAATCAACAATTACAGCAGCAACTTCAATCAATGCACGAT AATGCTGAAAATAACAGGCAGAAAAGTAGAGAGATACTGACTCGGAGGCC TTCCTACaggtatttcaaatttttttataccTGTTGCTTTATGTACCGTG AGATTGTACAAAATCGCGCATGTTCACGTGCGCAATTTCGTAAAAATTTT GTCTTTATTACGTGAGTGATTCGTCGCTCTCCACTCCTCCTTATTTCTTC CTGGAAAAgcatgtaaaatacaaagttaaataaaaacaaaaatggtagag tagagctgcgagcagagctgcacagttgcattttttaaTGATCAGCCCTA GGTCTTTTAttttagggctatgcatgttagcttccactgatgtaagttac ccaatctcacggtagtaAAGCTAGACAAATTTTTGGACCTGCAcatagtt ttttgtttgtttttatttttgcgcGTAAAACTTATGCCAGTTATTAGGAA CAGGCAGCTTGCTTGGAATTGGGTTGAAGAATCCCTTGCAAATCATGAGC TTATTTTTCCCCTTTTTAACTGGTTTAAGTGATGATTTGTTGGAGATCAT GAAAGTATATTTCATTTTATGGTGAATATCACCAggttttttaagatgaa aatctTCCTTTTTATCTAGGAAAATTCTTGATGACCTGGCAGCAGATTCT CCAGTCAAGATGGAAAACTATGATGATAATGGAAGTAGTAATTCTTCAAG TCCTGGTGGACCAGAAGAATTGACAGATAAACAACAACAAGCTCAACAGC AACATCAGCACCAGCAACAACAGCAACAGGCTCAGCAACAAGCACAACAA CAANTTTCTGACCGCGTTATCACCATGTTCCAATGAATGACGTCATGTTT GGAAAACAATTCGAATCAGAAGAGCTTTGATTGGTTGGCATTGTTAGTTA TTGGTTTTACATACTAGAATATAATTATATACAAATGTTGAAGAGAAACC CTGGTAAAAGCAACCAAGAGTTACATCCTGACGATCTGATTGGTTAATAT TTGATGACGCCCGCCTACGTCAACGATCTTGTTCgaccaaatttcttttc ttctcaAGAAGTGACGTTAGGGAATGTGACGCAGTTTTCATCATACAGCT AACACGCAAGAAGTCAAAACGTAACAAACCGAACAGTAAGAATTCATTAT ACTTGTATACTGTATTTGAACCTGAACGTAGAgattttgtttgttatttt ttggaaagaaactTCTTTTTGTAAACCTTTCAGCATTGGTTCTTAGTATT GAATTAAATTTGAGTGAGAAAAAAGCGAAGACTAAGAATTATTATGGTTA TATTAGGTatgcttttttaaaaattttacttcAATTAAACTTTCAAATAT ATTGTGAATTTATTATATGATTGGTTTAATTATTTATTATATCAGGTATG GATGTTGCACAAAGTGGACATGTGTTCCAACCACCTATGGGACCACCACC GAGCTCTCTTAGTGAAAAGTCAGCTATTTTGCAGCAGCAGTCGGTCATTC AAACAAATCAACAATTACAGCAGCAACTTCAATCGATGCATGATAATGCT GAAAATAACAGGCAGAAAAGTAGAGAGATACTGACTCGGAGGCCTTCCTA CaggtatttcaatttttttttatacctGTTGCTTtatgtaccgtgagatt gggtaacttttgcatcagtggaggctaacatgcatagccctcaaatgaaa gacctgactggtcattaaaatcGTGCCTTTCAATAAGACGTGCGCGATCG CGCTCGCGATGTAAAACGCTCGTCAATCTCGTATGGTGAGCGAAAAATTG TGCATGTCAATTATACTTTGATTCTATAGAAAAATATCTAAGGGCGTTTT GTACAAAATCGTGCACGTGAACGTGCGCAATTTCGTAAAAATTTTGTCTT TATTACGTGAGTGATTCGTTGCTCTCCTCCTTATTTCTTCCTGGAAAAgc atgtaaaatacaaagttaaataaaaacaaaaatggtagagtagagctgcg agcagagctgcgtagttgtattttttaatgaTCGGCCAGGTCTTTTAttt tagggctatgcatgttagcctccactgatgtaagttacccaatctcactg TAGTAAAGCTAGACAAATTTTTGGACCTGCAcatagtttttgtttgtttt tatttttgcgcGTAAAATTTATGCAAGTTATTAGGAACAGGCAGCTTGCT TGGAATTGGGTTGAAGAATGCCTTGCAAATTATGAGCTTATTTTTCCCCT TTTTAACTGGTTTAAGTGATGATTTGTTGGAGATCATGAAAGTATATTTC ATTTTATGGTGTATATCACCAGGTTTTTTAGATGAAAATCTTCCTTTTTA TCTAGAAAAATTCTTGATGACCTGGCAGCAGATTCTCCAGTCAAAATGGA AAACTATGATGATAATGGAAGTAGTGATGCTTCAAGTCCTGGTGGACCAG AAGAATTGACAGATAAACAACAACAAGCTCAACAGCAACATCAGCACCAG CAACAACAGCAACAGGCTCAGCAACAAGCACAACAACAATATCAAAGTAT TCAACTCAATGGCGTAATTGCTCCCCCATCTTCAGTTGGTGGCACAGTGG TTCAGCTAAATGATGGCCAGGTACGTAGAATTTAATGGATGAACATAATT CTGCTAGTGTAATACCGGACGTTGGTCTAATTCCGCTCATCTTTAGATAA GAAGAAATAGAGATATGCATCTtactaaatttcaaattttacttttcagG CTTACACAATAAAAGGTTCTCTTCCTGTTGGATTGGAAAGTGCAACGCTA GCGTCTCCTCAACAAATGGCAGAAGAAGCAACTAGGAAAAGAGAACTAAG GTTATACAAAAATAGGTAAATATTGCTTGATTTTTACAataattttcacc attttatcaAGAACAGTTTCTAAATCTGAAACTGAATTTCTTTAACAAAT TTAGAAAGTTAGCAGAAAACACCAGATACCAAATTAAGGCATCGCATTTG CAATTTGTGATGCATTTTATGGATTtcttacaagctaaaaatttaTCTAT TTCAGGATGAAAAAACTATGCTTGCTAAATTCAATGCATGAAATACTGCT GTTAACCAAACAGCTGATTGATCTTGAATTTAAAGCTCCAAATCAGCATT TTAGTCAGTATAACATTAACtaaatttatgattttgttcatttttaggGA AGCAGCCAGAGAATGCAGGCGGaagaaaaaagaatatgtaaaATGTCTAG AAAATAGAGTTGCAGTACTAGAAAACCAAAATAAAGCTCTAATAGAAGAA CTAAAATCTCTAAAGGACTTATACTGTAGTAAAGGAGATTAAGTTGGTGG TTTGTGTCATAATATAGAGCTGATGTTTGTAAATAGACGTATGTTTTAGA GTTTTTATGgtttaaatatcttttttcttAACTGATgactaaaaacaaca aaatgatatttttattaGCACTTTAGAAGGATATTATTTTTcatatgaat ttaaaaaaagtgaaatcttATTTGTTAAGTGTACAAAAATTTGGAGTGGA GTGGGTCAGCCTTACTTTCTTTGCATGAATCAATTGCACACTAATTTACA ATCAACGTAATTCCTTATCCTGGACAAGGAAATGAGTGATTTAGCTgaat tatattttcattttaattacTTTCTTATCTGTTTAGCTCAACAGTTTGTT ATCCTCAGAGCAAACTTTTTAAGATGACATCAAATATTATTTCGgccaat ttttcatttattttcaaaacccATGTTGCAATTTTCCTGATGTCATATTG ACTGTTTGTTTTATGATTAAATCTGTTTACAAATTTGTTCCCTAAACAAG ATGATGTTTTCATCTAAATGGATTTctaaacgtcaattgacgtcaAGTAT CGTTAAAGTGGCTTAAGACCCTTCACTTAGATTTTGTGCACGGTTAATAA TAATGTATTATTTTTCagtttatatatattttttatcgtCTCAATTTATC CACTTTTCgtgcttttctttctttttttttgtcatggGAATTTTGGAATT GTTTGTTAAGTCCTACCCAGTTCCatgttttatttgtttcaatattCTGG TGTTTTTGCTTTGGTNGTCCTACCCAGTTCCatgttttatttgtttcaat attCTGGTGTTTTTGCTTTGGTATGCattagtttttttatatatttgttt GTCTGTTTTTGAGCCTGTATTAATACTGTAAATATTTTACATTATCTCGA TAATATTAATAACTAGTCCTTTCCGTGACAAACTTATTATTGTACATACA ATATACCTGTATCCTTACAaccaaaatacaaaattattaCCAAATTAAAC T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011946TCONS_00011946Clytia hemisphaericatranscript
TCONS_00011947TCONS_00011947Clytia hemisphaericatranscript
TCONS_00011948TCONS_00011948Clytia hemisphaericatranscript
TCONS_00011949TCONS_00011949Clytia hemisphaericatranscript
TCONS_00011950TCONS_00011950Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011950-proteinTCONS_00011950-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000134supercontigsc0000134:267534..272534 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.55 28.84 12.46 9.74 141.49 109.09 81.27 83.23 53.79 204.2 43.56 137.23 248.79 225.17 213.81 144.29 130.53 179.94 191.46 179.66 49.46 51.58 54.57 41.04 204.56 131.42 285.01 258.43 136.08 133.79