XLOC_006798 (gene) - C. hemisphaerica

Overview
NameXLOC_006798
Unique NameXLOC_006798
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000137:42481..49146+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006798 ID=XLOC_006798|Name=XLOC_006798|organism=Clytia hemisphaerica|type=gene|length=6666bp|location=Sequence derived from alignment at sc0000137:42481..49146+ (Clytia hemisphaerica)
AAAAAAAGAATGCAATATATCCTTCTAAAGATGAGAAGATTGACAGGAAA TCGTCATTGGTGCAGGAATATCTTCTTATTCACAGCCTTCTGTTCGTTGT CCATGTACCTATTGTACTTGACTGTGGGCGTGGGCGGAGAATCACAGGCG GAGACTTATCACATGGAAAAGAAGGCCGGTGATGTAAAGATTGCTATCGT GGATCAACACCAAGAAggtactaaagtctgtctcaaaataatttgcagct gagacaaaaatgactgtgacttttgatagaatttgaatcaagttgcgatt ttgtgctcgttgaaaagatatttgtgagtggaatattatcaagcaaaaac atttgaaaaataaagaaaaatgaaaatgaaaaatgaagaagaaaaatatc aacttcttgtagaaatgtggtataattaccattttcacaggagtggttct tcaatctttgatcatcatcactgtcgaaaaaactttcaaaaatgctcatt caatcaaaagatatcaaacaaagtttattgctggttgactctataaagta gtaaaaaacgacaaaaaaacagccagGCTGCTAAGGCTCGAGCGCTGAAA TCAGCTAGATTTTTTTCGCTATCTTGCAAagtaaaacatttttagaaTGT CTAAGCATGGTAAACGACAGCCCTTGACCCACTGAGCATAAAAATGGTAT AATATCAGTGGTGCGGGTTTACgaacaattttcagaaaatgagctagaat gctaagcaaccccagccctgacctGAAAATTGGAGTTGTACGGTCAATAT TAAActacttttttatgattttactGATGGCGGACATGATACAATCATGA GGGCTATCAGAACCATATAAAATTGCACTAATAAGTGTTTACGATTTAGT ATCAAGGTATATTTGCATTAACATGCATAACATGTatataaataaaatac aaaatcacTGAAACGCTAAGCTACGCTTAATAAATGCGTCACccgtttgt taatttttcgattttttctaaAACATCTCTCCGACCTAATTAGAGCCTCT TAGCTTTTTAACTCATGAGCTGTCAAAAGCAAAGACCGCTAAACAGTCTG GTAGTAGGTAGAGTACTATTTATTCCCTTGCACCGGCAATAAGTTCCCAT CTGTTCACCCATGCTTGGTAGCTTCTTCCAAACGTACTCCTTAATACCAA AATCTGTAGAGGTCTTAGCTAAAACAATAATATGGTATGTATGGCCCATA CTTAAGCACCATCTAAAGCCATATTCATCCTCATTCACAAAATCTATTTG TTCCCATTTCAGTCATCCCGCATTGGTATCAAGCGATCAAGGATGGTAAA ATCGCATCCAGTACAAACACATTGGTAAGTTGAAAGGCTTAAGATTGAAT GGATGATtgttggtccagcgcgcagcagaatggacctttaaaaagcaact gatcgaaaagattttgtctttgtctgggcttgtgcgcgcaataaattaac aagtccaggctaaaccaaccgccgatctaaaatttttgccccgtctaccc gcgcgatgtttgacctatgttttggattgaattggtagtagagtcaaatt tcccggttagattaaagggttgtttcatgtagggtcaggtagggttaggg ctagggttggggatgggagttaacccctggttagggcTTTAGCCCCCGGg cagagtttggagtaaataccatgtttatgaGGAACTTTAAACTCCTCaat gcagttgtgactcgatggccgagtggttaaggcgctagCGTTTTAATCAT AGGTGCattgtatatagtgggttcgaatcccatcagcggcaaaagtttcg aaatttcaggaaatgcatcaaaaactttcaaaacttagcaatacaaagaa agtgtcaaagaatagaagctcagagtggaggatgggaaggaaattctttt gcgtcacttaaggaacccggtacaaacgacattcggttattgccatgtca gctggaccttcacgccgctccggcttcttgtgTTAATAGTTATTAGGCGT CTTCCATTAGGGAGGGgacttagaaaaaaacaattagtggcatatgtaca aaagctgccaaattatataaaaagaagaaaaaaatcaaaaattttgaccg ggGACCCTNGacttagaaaaagaaaattagaaagaaTTTAGTGGCATATG TATAAAAGctgccaaattatataaaaagaagaaaaaaataaaaaattttg acctGGGACCCTTTTCAGGGTCCCCCCGGGCCCCATTTCTGTGGGGTACT CAGTGCGACCCCGGACCAAAAATAGCCTAACACCAACTTTCTCAAAACAT AGTCATGTGGCATatcaaattatcagaaattttatgctgattccaAAAAA CATAGTACTAGGGGTCAGaaataaagctaaaaaaagTTATGACCATATCT TGAACCAGATTTTGAGTAAGTTGCATAATTCGCAAGAAATTCGAATAGAA TCTTGATTATGACTAACTATCATGTAGTTAGTAGTTAAACTTTGACATAA TTCTGGTTAATTGAATGTAACTGTTTTCATGATATGAAGacattttcagg tttatttaagttttctttGGAGAGAAGGATTATGAATGTAGACAAAGATG GTGAAGCTGAGGTACTTCGAACAAGAGcaaaagatattttatcaagCCAG AGATTGccaagtaaaaaatcaaaacaaacacataggaataaaaagttttc aattgCAAAGAGCATCACAAACTGCTACACGATTGGACAGATGAATGTAA AGATTGTAATACCTGTGTAAATTTTGAGATGTTGGAAAGATAACCTTTGG ATGTTCTATCAAATGCCAAGAAAGCGTTAGAATATCTATTCACCACTAAG ATAAGGTCAATACAGGAAAgaataagaattttgaaaaaactgttgCAAAG GGTGTTGTATTGCAATGGattttttgcaatgtttatccaaAGAACTATTG AACAGTGGAGCACAATATCAAAAGATTATTattacaattttataaataat taaaataatatataaatagTTATGAATCATTGAAAAAAGAAGCACTTCGA AAAAACCAGATGATTACTGGCCTAAGTTTGAGAAATACAGCAAATAGGTT AAAGAATTGTTTGACATTATTGGTAAGATTTCTCTTTGATTATTGACTAG TCCTTTGCTAGGGCAAATTCTCTCCGAACTGACAGTGATATCCAATtcga tttttttgtaatttttgtttaggTATACAAGTTGAGTTTAATCCATAGAC CATGATTTATGGCACCTTTAAAGTTTACATTTGCAGGATGCAGAATGAGG AGGCAGAATGGCAAGAGGTTGAGTTCAAGGGGGTGGGTTATCAAAATGGG TTAACAATATATTTTGAAGGCACCAGATCAGCTACCAGTATCTCAATGGC AAGTCTTAAGAGCATCCTCAGGGAATTGGAAAGTTAAAAAGAGAGAGAGT CTATCAGTGAAACTGGTACGAAACCCTTCTACTGGCATTTGTTTCTGGTT ATTGTAAAATGTCCAGTCATTTTGCCACATTTTTACACCCAGGTTGTTTC TTGTAGCCTTACCCTttcttttgaacttttaaattaaatttagcaCCAAT CAATGACTGTACCCTACAATGccttttcaaatgaaatgtAAACTTTAAAG GTGCCATCATGATCTATGGATTGAACTCAACTTGTATACCTaaacgaaaa ttgcaaagaatTGAATTGGATATCACTGTCAGTCCTAGGAGTGAATTTGC CCTAGCAATGGACTATTCAATAATCAAAGAGAAATCTCTCCAACAATGTC AAACAATTCTTTAACTTATTTGCTTAAAATCATCTGTATTTTTGAAgtgc ttctttttttcaataattcataATTATTTAATAATGTTTTAATATCGTGC TCCAATGTTCCATAGTTCTTTGGATAAACATCCAAAAAATCCATTGCAAT ACAACACCCTTTTCAACagctttttcaaaattctcattctttcctGTATT GACCATCTTAGTGGCGTGAATAGATATTCCAACACTTTCTTGGCATTTGG TAAGGACATCCAAAGGTTATCTTTACATTCATTCTGTCCACTCATGTGGC AGTTTGTGATGCTCATtacaattgaaaaactttttattccttgatttttt actttgcaatttctggcttgataaaatatattttgcttTTGTTCGAAGTA CCTCAGCTTCACCATCTTTGTCTACATTCATAATCCTTCTCTCCaaagaa aacttaaataaacctgaaaatgtCTTCATATCATGAAAACAGTTACATCC AATAAACCagaattttgtcaaagtttAACTACTAACTACATGAAATGTCA GTCATAATCAAGATTCCATTCAAATTTCTTGCGAATTATGCAATTTACTC AAAATCTGGTCCAAGATATGGTCATAActttttttagctttatttctgac ccctactactaatgttttttggaatcagcatagaatttctgataatttga tACGCCACATGACTGTGTTTTAAGAAAGTTGGTGTTAGGCTATTTTTGGT TCGGGGTCGCGCTGAGTACCCCGCAGAAATGGGGCCCGGGGGGACCCTGA AAAGGGTCcccggtcaaaatttttgatttttttcttctttttatataatt tggcagcttttgtacatatgccactaaattctttctaattttcttttttt aagtccCCTCCCTACTTCCATGATTCGAATTTTTCGAACTATAGAGATAC TAATTGGATATTAGACAGGAGACTCTTCCtgcattttcataatctgataT ATAAAGCATACAGTGTTAGCATAACTGGTAAAACGTTAGTGGAACTTTCG ATCAAGCTCAGTTACAATCTCGCAACCAGAGTCCACGTCCAGGGGCGGAT TTAATATATTTTCGGACCATATGAAAGATCCAATTTTCCCGATTCGGATA ACGAAAACCCCGATAATTTCcccgaaaaaataagaaaaagagcAGGGGGT TTGGGGGGCGCTCTATGGCCCTGGTGGGGGTTCAGGGGGCGAAGCGGAGA GCCATTTGCACAAATtcttttactgatggacgtaaTACAATAGTGACCAC TATCAGTGtcataaaattcaaaagtaaactatgtaagggactgggttcga atTTTCTCAGTTAGGAAAGTCTGATAAATGGAATGCAGCCtacaaatgaa aattaattacCTTAATTTTTCACTAGATCCATTTCGACGGACACTCCGAC ATGGCAACTCCTGAGAATTATGAAATCATCGAACAAACACTAATGCAACC AAACGAAAAAAGACACAAAAGTAAATCATACCTTCTCCCGCTCATGCAAG CAAATGACCGTTTCATTACTTCCGCTGTTTTAACCGGTCTTATTGACCGT GTCATATGGGTTCAACCGGATTGGCTTCGTAAAGATACGGTCGAGATACA AGTCGGATACATCGGTGAGACGACCAATGTCCAGGATCCTGAGAAATCCA AAACAGCGTGCATGTGTGTTAAGGAaattagaaaattgaaaaagcaaaGG GAACACAAAGAAACACACAGGAAAGAAGAGCTAGCATGTTTCTATCTGAC TGAGGCACTTCACAATCAAACACAAATGGTCCCTCAGAAGTCATGCCACA AGGTTCACCCGTTGAAATATTTCGTTTTCAGTGAACGCAACTTCATGCGC TACTTTCGCTCGCGGTCGCTGAAACCAGGTCACGTGTTCATCGATATCGA TGAAGATTATTTTGGGGTGGAGGGCGGCGTCCAAAAAATGATCGATGGCG GGATTCCTATGGATGTGATTTATATCACTGATGAAGTCATCCCGCAAATA TATTGTCcgaattccataatggcggaaaaaGGATTGAACACAGCTCTACA AAACATGTTTCATGAGTTATATCTCTCAGACAAAAGAAGTGAATCGCTCA TTGAAGATGTTGTTATGAAACAtacgaaaaaatatttctgtGAAAAACAA GATAACACGTTTGTCCATCTCTTCATCAGCTATATACAAACACAGTCCAC AAAACAAGTACTGAAAGCCCTTTCTTCTACCAAGTACTGTTTATTCAATA GTTTACAACTCAGAGATGAATTACTTGGTACTAAAAATGATTTTGCGCTT TGCCATGGCACTATATTCCCTAACGATACTCTTAATAAGATATACGTCGA TTCCAAAACTGGAATTGAGACCCGTCGTGATAATTTGTCTAAAATGTTGG ACTTCATATACGCGAGCACGCAACCACGTTTGATCACGATTGCACGTTCT TTACGTGACGGTTACGTGCCCCGTGAGCAACAAAGATTCATTGAACGTAA CGTACGTAAAGCCGTTGACCAAACTTTGAGGAAAGTGAAAATGACTTCAG AAACTATTTTTGATGAGAATctagtttttggtgaaaaaggCTGGGTgtaa atatatataatataattacTTTTCATAGgacatattttgaaatttttata gaATTTTATTTAGAATTGAAATTTAGAAAGTTGTAAATATTTCTTCCATT TATGTTAGCATTtatattcattcattatatttACAGTTTTAGGACAGTGC CTGAGCTTGCTGAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012087TCONS_00012087Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012087-proteinTCONS_00012087-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:42481..49146 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35 0.47 0.28 0.19 0.75 1.1 14.3 17.19 11.78 11.06 8.75 4.14 3.62 3.47 5.65 6.14 5.74 2.9 1.7 1.43 2.49 2.68 3.57 5.78 4.57 4.93 0.61 0.28 3.16 2.23