XLOC_006967 (gene) - C. hemisphaerica

Overview
NameXLOC_006967
Unique NameXLOC_006967
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:211797..218873+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006967 ID=XLOC_006967|Name=XLOC_006967|organism=Clytia hemisphaerica|type=gene|length=7077bp|location=Sequence derived from alignment at sc0000144:211797..218873+ (Clytia hemisphaerica)
AGTTTTTCTACCTTCTTCGGCGCTGTTGTCTTGATTTTTCATACCtgttg aatttttctttattttgcagtatgaaaaatatgaaaaataaatttaaatt tagaagAGCCTCGGAATAAGTGGTGATAACCAAAATATCCCATCATGGCA ATGTTCAATATCTACAACGAGCTGGTGACCCGAAAATACCACACTCATTT TTGGAGTTTTGCGACCATCTTTTACATTTGCGTCGGCGTAATCACGTACG TCGGGCCGTTACTGATCGCCTACTACTCTCTAGGTATGCCAATTTGTTGT TTATGTTGCACGGCCCAAAGTTAcggaaaaaaagttaaaatcacTGATGG TAAATAATCCGAATTTATTATAAGATACGTCTACACGTCAAAAGgtagtt ggaaagatatttcttcGGCTTACATATTCTTCTTATTATACTCATATGCA AGTGAATTAGTGAcgaaaaaatcgcgaaatttttatACCGACAAATTTTA ATAGGCGATAACTTTTTTGGCCGACGATTATTTTTGACCGACAATTAATT TTCGACCGACTAACTTTTCTTACGAAATGATTTTTCGTTACTTGCTACTG AACATTCTTTCGTTTAAATATCGAATAGTTGATAAATGCTCAATTTAATT TTCTCACATTCAGGATTTTGGTTGAAAGAAAGCACTTACCGTGAACAACC AGAAGTGAGGTTCAAACACGATTTGATATTGGTCTTGCAAGGCACCTCTA CAGTTCTTGGATACAGCACCTACAATAATTTCAATACCATTTTGCGAAAC AGGCTTCGAACGTCAACTATAAAGGTATGCTAATGCTTTCAAGCTGAAAG TCTATGCTTTAACCACTTACCACCCTCCTGAAATTGTTTGTTAACAATGT GCGATTTAAGTAAACTTTTTGTGAATATATTATCTCAAATTAGAGTGGAA AAATAGTGAAATTTAAACGGATAAGAATGGCAAGTTACTGTTCCATTGGT GAGTGTAGTCACAGAGTCCATTATCTAGCGCTAGTGACTTCTCATATGCG TGATGATAGTACAGCAAGTACATAACCCAACTAAAGTAGAATGCCATAAA CGAAGACGGGTAAACTCATGTATGGCCTCAACAGAAATATTTATGGTTTA TGATTGGCCAATAGAAAATTTAAATCAATaataatgatatttttctattt aaCAGTCGCAAGAAGTTGACGAGAACAGCGATGGTAGATACGATTATTTG GAGTTCACTTTAGAAATGCCCATCAATGCGAACGAAGATGTTCGATCGGT GCAATTATTGCTATTTTTCCATTATAAATTGCACGTGAGTTTCATAATTT TTCTCTAAACCAACACTCCTATCTCGTTGTCTTGTTCACAATTCTAAAGC cgttttgatgaaatttgtgtTCTTCTGACTGAAGCATGACTTTgcgatca attttttttaaagttggcGCATCATCGGGTATATAATACAGGGTATAAAA CCATCTCATAAGGAAGTCCTAGGAATCGATGGGAGTCTTAACAAACCTTT ATCTCATTTTTAGAAATATAGTAGCGTTGAGCTAGAGTCGTTGGCTTATT TACATTACGATTCTGGAATATCTGGGTCTTCATTTTACACGGACGGTGAC CTAttgttgaaacaaaagaatcccTTATCTCACAAAGGAAGCTTCACTAA ATTCAATGTAGGTTGcaatttttcgatattttgtttttctgtttatCTCA GCTAAACGTTtctaaatttgatttaaaatcattGTGAAATTTCTGCGCTA AATAATAATTTGCAGTATTTACAACTTGATTTGGGGGATTTGTTCTAAGC CACTACATACTAAAGGTAATGATCTCACTTAAGGCTTTAAATCATACTCG AAGTCATTAGAGGGACATAAAattagtaaaatgtaaacattacgcaaacc acgtgtcattaaagagaacaataaaAATCACGTGTCcgaaacaaacttgt aaaacaattgaaacaatcaaaatcggccatatttgtttttattttttatt ttcacatctgacatttgttttgatttttatcccgctgcatacggtttgtt taagAATTTCGTCattacttttatgtccctttaaaacgCACATCATTAAC ACAATCATTACAAACATAGTACCTTAGGTCtcctctctttttttttgtag aCGGGAATCGTTGACAGGACGAACACGGACGTCAATGCTTTGAACCTTCA CTCTATTCTCACTAACTACCAAGCACGAAACTGTAAGTAGCAAACTATCT AGTCATCGAATAAAGAAGTCAGGGTAAAATCGGGGAAAGCGTTTACTCCG AGAAGATTCTGGCCACTTTGTTTCGAATAGCACAAGACTGCACAAGACAG GGAATCTAAAAAAAGTATCAAATCTGCACAAATTTATTCGTTTGGACGAC TTGTAATCCCATCCTACTTTGCTTTTGCACGTTGATTACTTGCGTTGTCA AAGGAAAGGTAATAGCTTAAAGGGTTTTCAAATCATTTCGAAATGAGCTG CTGTGatattggaactcgtacaattttctagttgaaataattatgacAAG TAAAACGCAGAGCGCTATTCTCTTCACAGGCAAGTTATAttataaaaagc aaaacaaatctTTTTCGGTTTTTGACCTCGGTGAAAACAAGGAACTTGGT GAAAAGGAGCGCGTTGCTCAAAAAGTGAAGGAAAATCTGACAGCCGTTTA GCAAAACTATCAAGAAGGTTGAAATTCAATTTATGGCATCAACTGCTTTT TTGGTGACTAATTAAGtggtaaaatttgataaataattCAATTTAGCTTT TCCTTTTCCATGTGTGTTTTCGACTTCGAAAGCTTTTGAGTAGCTTATAA CCATTATAACCTGCATCGTATTAAAGGATTAAGTAGTCGAGTAGTCTatt ggtttattttgtttaaaaaaatgaatatcgaATAAAATGGTACTTTACTA CTTTAGTAATGAAACTAACATAATTCTtccttttttaaagttttcgTATT TAAAAATTGCTATTTCGTGGCATATTCATATTCATTTTGGCAAGGAAACA TGAAGGTTTTCTAGTTCGATGGGGAGGGGTCCTCAATTCTCTTTCTGGTG GTTTCACTTGCACGTTTCAGACCTTCTGCTTTGTTTCGTTTCTTCCTTTA TATCCTAGGAAAGTCAGTTTAGTGAAATTTGCATGCTGTTAACGTGGTTC TGTGGTTTCTTGCTCATACTTTCAACTTTCAAtagtttttggccaaaatt gacGATTCTTACACAGTTGCCCTTTGCAACAGATTGTCGCAATCCTTATT CAAACTTTTGACCCATTGCACTTGGAAGCACTGAATTTGAGCAAATAACC GGTTCAATCAAGAATTCTTGAAGAACAAAAAACAATTTGTGGCTCAAGGa gtttttatcaaataaagGAAAGCTAGGTCAAAGCCCCAGAAATCTTTTAT ACATGGGGGAATCTTCTGAGTCGACAGGAGTGTGTGCATATGATTACATA TGGTCTCAAATATCCTTTTCTCTTTGAAAATGACCCAAATCATCCTTCTC TTAGCTATGTCTAAAAACTAAAGCCCTAATGTTGTTACTTATTGTTACTT GTAGGTTTTGGAAAATATCATgctcattaaaaaatttacgACTGTACTAC CAGGAATTCGGTACTGATAAGTGCTCGTTGCGGTTTGTAACTTGCTGATA AAAAAGCGATTAGTTTTATTTCTACCatgaatatatatttgaaaaagaTA TTCTCCGAAATTTGAAAGAGATTACTTAAGAGTTTAAATCGTTAAAGCAG ACTTGATACTGGTTTAAGGATTTTAATTCTCAATCAACTCTGGAGCTTAG TACGTGAAACGAGCAACGTGTGTGAGATCTTATCTGAAATGTTTTCATGA AATGTCTACATTGTGCATTCATTGACATGAAATAAACCACATATGTTATT CTATGATATGTGAAATTGAATTTCATTCTCGATGTTAGTGGAAAAATCCT GTTTCGGTTCTTATTTCCCTATTATGACAGCGAAACGGAAAATTGGATTT TAGAGGTCTACTTTTCATCCAAACAAAACCATCTCTATCTTAATTTACTC TATTTGGTCGACTTTTTACAATTTACCAGCTGCCACTTGAATTTATCCCC TTACCGCCCCCTGCTACCACGTTAATGGtcttatatattttataagactT AAACAGAACATGTTTGCAATTGGAGAGTTGAATTAGTTGACCCCAACTCT TGTAATTTCAACCGTTATCTTCTAGAAATGCTCTGTTCCATTCAATAAAA TGGGATGGCTTTAAAAACgaatcaaaaatctttttcgacaAGCCTCTTGT CATCTGCTTGTCACTTTTACTTTATAATTTGATCAACTCGCTTTAAGTTC GTTACCTTATTTCCTCTACGTCTAGCGCCATCCCTAGAAAGTTCTTTAAC TAAAGTCCCATTTTATAAGACCACCGCCCTAGTTGCTTGAGAAATTGAGT TATCTCAAGCGCACAGAGTGTAATTACTTAAAACTATTATCTGACTATTC AAATTTTGAGTCTCATATTTCAAGTGTAATGACAACATGTACCCTGTCGT GTACTGATGTAGATCTCCTTGTAAGATGTAACGTTTTTAATCAATTGCTT TATCAATTACTATATTAATCTGATTGTCGAAGGTCTGTTCATACCATTAG AAGATTTCGAAATCTTGTTAAGTTGTTACATCTTTTGTGTCTCTGGTGTT CCAATTAGCGTTTTAAGAACATTGCGTTTCATTGGACTCGGGGGAAATAA AGTTNTGGTGTTCCAATTAGCGTTTTAAGAACATTGCGTTTCATTGGACT CGGGGAAAATAAAGTTGTCTCTCCATAACTTAGAAAAATAACGGGGAACT CGAGTATGTTCTAGTTATTCGctttatggagactctactgtttcggtttg gaaaaaaaatagcACTTGGAaagattttggtcaattttccctagttaata aaaaaaattagtcaCTAACCCTCAAGTCTTTCCCCGGATAAAGTAGTAAT ACCTGGATTATCTCAATCAATACTCGCCGTCAAACATTTATTTTCTCTTT GGAAAATAAGGTGGCCAATGGAAGTAAAGGGTCCCTGGAAAGTTTCGATA AATCCTGGATTTTCTTATGTCTGCCTCAGATCTTAGTCCTTTAACAGGCA TCCGCGGCTACTCGTTTTTTTTAGgaaacacttttaagaaacatgaggct cagaatgccttaaaactaagaaacatgctgtggctgagaatgagaaaata acattttttatgcgatttttttaagaaccttccaatccagccttcctaTT GACAGGAAcgaaaaaatccttttttttcaGCTCCTTCAAGCCACAAAGCC GTGAAATCCATATAGTGTCCATTCAAAATTGGAACGTGAACTTTAAGCAA TAGCATTTTTGGTGAATTAAGAGAGCTCAGAGTAATGGTGTTTAGAGTTT ATAGTGCAGGTCTGCCACGATGCTTGGTTTCAAAGCTAAGGATGCAAACA GATTGAGCTTTTAAAGGTGATAAATTGAGCTGCTCTCTTGAGAAAATACA ATACATgattttttatcataatttatttAATACAGTGACGACGGATTTCA TTGGACGTTACCCATCATGGATTTCTGGAAAATCAACCACATTCAAAATA CAGACGAAGATATATTACCCCGAACAAACTATAATgtatctttttcaaaa cttgctCCTCGCTTTTTTTTACCTTTGCTTGGGGGCATTTTGTTTAACCT TAACGCTAGTCGGAGAAAGGTGGTCTTAAACTGAGGTTACTGGCATCCTG AATGAAATTGAATAGATAGGTACATACCCATCCTAACATGTGAAATGTGT TTTGTAGAGAATTGCAATCACATTATtctaaacataaacaaaaaaaggGA GTTCTTGTTTTggctaaatttttcttttggtaGACCTCAAAATACTCTCT CTTTGAAAGTTCAAAAGGCGTGGCCGTTTAATTTAGTTTCCTTTGTTTTA AAGCCAGACGTTATTTGTTGCAGTGTTTTCGAGGGGAATCGCTCAGGAAA CATTGAGGAACCGAGGTGTGCCGCTAATCAAGGTCTCTTTTCTCCTCAAG CCCCAAAAATATCACGCTAGGGTCGATAATTCATTACATTTTGAATGTTA TTATTTGAAAGGGTCAACTTTCGGTCATTGCAGCCAGTTTTCAGtgtatg ttttgaaaaaatgtaacAGATTCGAACTTCGTCAAAATGTAGAATctgta gaaaatatttttaaaaaatttaaggcATTTCTCAGTGATTTAGGTTATCT CTAGATTCTTAACTATCCTTAACCTCTTGATTTCAAATCTAGCTATCAAC CGGGATTTTGGCAACTCTTGAAACACGCTTGGATTCAATATCTGGCCatc cttttcattttcatgtttaTTTTCGGTCACGTGAAATCTTTCATTTACGA GAATCGATTAGTGGCCACAATCATCAAGAAGAAACATCATAACGATTGAC GGGAAGAATAATGCTACTTGTCATCTTGAAGAACGGAAAATGAGAATGGT TTTTTCAGGAAATATATCTGGATTTCGAAATCGGGTTTAGTTGTCGAAGA TCATCATTTGGTTcgcttaaattttttttagaaaatgaactGATGATTCA TATATGAATGATAATTTGAAATAGATTCTGCTAGAAACTCTAATTGAGCG TTGTTAACTTCTGATGGAATGGAAGTGATTGTTAGTTGCATCTTGTTTCG GCACTGTTTGGAAGTATCAATTTTCTACGGCAgataaaaaatatcttttt taggaCTAGGAGGTTTGGAAGGTTTTTATCAGCTGTTATATATTGTTTAA AGATGCATATTTACACGTCAGAGGATTTTAGAAGATATTTATTCCTTATT CAATCTTACCTACAAATTTTGACGTTTTCTTAATTCCATAGGTGACTAGG GAAAATACTCCCTTAAGTAGTTTAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012390TCONS_00012390Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012390-proteinTCONS_00012390-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:211797..218873 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM231transmembrane protein 231 isoform 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
98.64 98.57 53.42 43.19 59.07 44.51 49.71 52.72 33.62 32.64 26.2 24.41 14.6 14.07 20.78 20.85 38.95 37.41 11.56 14 30.86 29.78 54.8 49.15 27.71 28.92 27.39 25.43 33.34 35.27