XLOC_007352 (gene) - C. hemisphaerica

Overview
NameXLOC_007352
Unique NameXLOC_007352
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000162:400199..408852-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007352 ID=XLOC_007352|Name=XLOC_007352|organism=Clytia hemisphaerica|type=gene|length=8654bp|location=Sequence derived from alignment at sc0000162:400199..408852- (Clytia hemisphaerica)
TATATTTATTATAGTGGCCCATTTTTTAAGCTAATTTTTGACTGGTTGAC CCTGGGGTCATTGTTATGTTGAACACGTTTTTACTGTACAGTAATTAAGA TTCAGCATTTACATTTTGAGCTCCAATTCGTTTGTTTTTCTTTCAGGAAA AATCACACTGGAAAAGAATGCACGAGGACGTTTACAAGGCTGATTGAGAT TCTGGAGAAAAAATGAAACAATCCAGTTTGGTACTGTTTCTGTGTATTAT ACTGAATTTATTAAGTTTTTCAAATGGAAGACTGGGTCCAGAAAAGAGAC AATTCATTACAAATGTGGAGATCAGTGATTCATATCTTCGAGATCATCGT ATGCCAGTTATGCCTCTATTAGAAGAAGAATCTCAAAAACGAACAAGACT GAAAGAAAAGGAGCTGACTTTTTATGGACATTTAAAAAATGATGACAGCC TGTCGGAGAGTAGGTTTTCGAAGCACTCGAATGTGAAATCGAACGAAAAG AATGGCAAAAAGAAAGATGGTAGCACTAAACCAGAGTATGGAAGGTGATT ATATCCTACTTTATCAGGGATAAAGTCAAAAAATAAGTTTCAGATGAATA GAGCATTTAACAGTTGGCACTGAAATATCACAACCCCCACTAACGCCATC ACCTCTCACCACAGTAAGCCCTCGATTCTTAATATTTTATCGAACGTTGA TTCTCTATACACTTTCTCAAAAGTTAATTTTTCTTTCTAGCGAGGAGAAT CCAGCGAAAAGTTGCAAAGATATTTTCTCAAAGAATTCGGATGCAAAGTC GGGGAATTACACGATTCGTACAAGTGATGATGAAATATTAATGGTGAGTT TTCTCGATGTGTATTGTAAATTTGAAAGGTCAAACTATAGAACCAGTTGA CGAAGTTTTTCAAAAACGAGCATCTTCTCCTTAGAAGGACTCAGAATAAG TTTGGTTTATTCTCTAAAAGAATACCTTCAGACCACATGAGTGAATTAAA AAAGAAAAAAACAAGTATTACTTGTTTAGGCACATTTTATTTTTTTACTT TTTAGGTATTTTGCAACAAGTCCAATTTCAGTTCGAATAGTACGCATTCG AATGAGACCACTCATTCAGCAGGTAAGAAAGATCCTATTTGATAATTATT GTAACTTATTATGGAAGACTCATCAACAAATTATTTATCTATAAAAAGGT ACATGATCAAACATATAATTCTACTAAGTCTTTCATGGGAGTATACGAAC CCATACCCATCCATTCATTCATTTTCTCCATTTGTTTCATCAGAACCAGA CGAGATCAAAGATTTGAGTACCAAAAACAAAACAAAGGAGGAACCTTCAG AAGAAGAAAAAGAAAAATTCAGTAAAGAAGTTTCCAAGGAAGAGCATGCC AAGGTTGTCCCTGGTAATCCAGAGCCTCCACATACAACACCAGGGCCTAC ATCTTCTGAACACCATACAACAGGACATTCAACACCAACAACTAAACCCT TACCAACTTCACCAACAACTAGCGCTACTACCAAACCACTTGGAGGTGGT AAGCCACAATCAATCGAGCCTTCGAAACAGCAACAGCCGGAACCAACTGG ACCAACAAACTCTCAGCTACCGACAACTACAATAAACCCGAAACTCGCTG GAAGAGTAACAAAAGAACAATACAACAACTTTGAGCAAGAAAAACTTGAC AATCCATATTTTCCAGACTTTCCAGCATCAAACCCAAATTCACATCCACC TCCTCCTCATTACAGTGACCGACCACCTGTAGATCAAAAAGAAGGTGCAC GCCCCTTGGAAAGACCACCCTACCCGCCTCCACCTCCAAGAAGGCCAACC CCTTACGACAATGATCAACGTCGACCTCCACCACCTGTCTTGGGATACGG ATCAAGACCCCAACGCCCACCCTTTCCATCACAAAGCAGGGCGCCGTACG ATCGGGAAAGATACCGCCCTCCAGAAGATGGATATAAAGATTCAAGCTAT CGTCAACACCCTTCACCATCAGAGGGGCGTTATCCACGCCCGCCACCCTC TAGATACGATGATCGATATAGGGGACATTTGAATGAAGAGCATTTGGATT TCGATCACGATAAAGCTGAGGGTGGTCAGACATCAGCAGCCAATCAAAAA GGGAAAGCTGGCGATTTAGGTGACACTCCAGTAGACCAAAATAAAATGAA GACTAGTTCTAACGCAGTGCCTGACACACTGTACGGAAGACGCGACACAC GACCAAAACTATCAATAAACAAAGTAGCCAATGATACTGTAGATAAACCA GTAGCTCGTAGTGTGACATGGGCCTTCCATGAAAAAGTGATGGAAGAGGA ACATAAGTTTAAGCAACAGTATGACGATTTTGAAACCATGGATGAAGCAA TCAATCTAAAACGTCGAAATAAAACTTTATTTCACGGGCCTAGTAAAGCG GTCCAGGTGAAAGCGAACGTACGAAGTTGGAGTAATAATCAGAAAGAAAT CATGCAAAAAGTAGCTAAGGAGCAATATGAGGATTTTGAGAAAACTAACA TGCAGATTGCGCAAGATATGGCCAGTAAGCAGTACCGTGAACAATATGAT GGCTTTGAAGCTTTCAAAAATGCTACAACCCAACAAAATGAAACTGAATC AAACAATCAGACAGACTCCACCAACAACCCTGGTGAAAAATTCACAAACG AACCTCAAAAAGTAGAAAATCCTACAAACCCCTTAGAAGCAACAAATACA AGACAACCTGAAAATAATCAGCAACCTGCATTGACTCCTACTACAACAAA CGAACAACCATCTCTAGTAGCAACCCAACAACAAAACAATGCAGTCAATA ATACGGTACCGAACCAAAATACAACTAAACCTACGGAAACCGACGAATAC AAACAATATGTGATTGACAGCATGCCTGAAGATGCTTTTCCCGACTTCCC GAATGCAACTTCACAAAAATCGGTTCTGGCGAATGATACAAATGCATTGA TAAAGGAACCTATAGAACCATCGATAGTTTCAAACGCTTCATACGGCTTC AAATCAGAAAATTCTTCAACACTGAATTCTTCTATAACTGCCATACCAAT ACAGATCCTAAACAAAACGTTTCCGATAGTAAATAATATGACGCTCCCAA ATGGCACTACACCTTTAGTAAACTCAGTGAGCAATCAAACAAATAATGTG ACAACGACACGAAACGATCTTGCGAAGCCGGTTCCTACCCTTTCAATAGA TACGATGGCGATGAAAAGAGGTGAAACAGTTTATCCTGAGGATGATTTGA TATCAAAATTGTTGGCGATCAAAGATGAGCTGGTGAAAGAGAAGGAAGCA GGTCATCGAAGACACTCTCTAGGGTTACACCATCACGAAAGGAGTCATAA ACTTCGTCAACTGTCAGGTCCACCGAATTATGCTCTACAAAAAAGGATTT CATCGCTCCCGACTCAAGCAATGCAAAGGGCACTTGTTAGTTATCATCAT TTGACCGGCGTCAAAAAGCATTTGGAGTTGAAGAATCTGACAGGGAAAGT GGATTTGGAAGACGAAGGGTCACCACATTCGAAGATAGTGGACGAAGGTG AGGCGCCACAAGAGGTGGGAGCTGAGGATCACGAAGACGGAAACAACGCA ATTATTGAGATGGTCAAAAATGGTGCAATTTCACTGGAAGAAAAAGATTC CAAAGATTTTTTGGAGTATTTGACGAAAGCTTTGAAGAATAACAAAAAGA GTGAAGACTCCGGCATGACACGAACACAACGACATAAAACCATCGCTAAT CCCTATAATTTTGTTGTTCCTGAAACCAAAAAATTCACGTTGGAAGGAGG GGAGTTAAATGAGGAACGCTTAATGGAAATTCTGGGGGAGAGAGCAATAT CTGCCAAACATAAACAACGGGAGCTGGAACAACGTAAGCGAATCAGTCAA ATCAAGAACCAAGCATTAAGTAAAAGGATCCCTCTCATTGGACACTTCTC TACTTCACAATTGAAAGAATTTTCTTTCAAAACTCAAGAAGACGAAGATG CAGAATCAGAGTTCTTAAAGAGTCTGGAACCCATTGCTAAGATGATCAGT AAAAATGGCACCTCTTTGTTTGAGAAGATGGAGCATGGTTTCTTGTCTAA GAAAGGCGAACGAGTGACTCAGTTGAGAGACGCATTGAGTAATTTCGTGA AAAATAATCACATGTTGAATGAACGTGGACACAAAAGACAAAGTTTGAAG CATATTAATCGCCCTTTGTTTACAGCTCAACAAAACATGGCTGATTTGAT CAAGATTTGGCAGAACACAATGGATGATGTACCTGGTTTGACAGATGAGA ATCGAAAAATTGACGAGAAATCTGGTACTGCTAATGAGACGATACAAAAG ATTAAGGAAGAACAGAAAGGAGTGAAGGAGAAAGTCAAAGAGATTGTCGA TAAGGAAGAAAAGGAGCAAAAACAAAAGACGAACCAAGTTGTCCAGGATA ACCAACCAGGGCGAAGACGTGATAGCGTGGACGACGATCACGTACACCAA GTCTTTTCAACCGTCAAAACAGGGATCGATAAATTACGACATAAATTAAA GACGAAATTATGGAATAAATTATGGGACGAGAAACACATGCATGATGATG ATTGGGACTTTAAAGGGAATATACCAAAATATCCGAAACAAGGGGTGGAG ATCAAAGACATGTTGAATGAGGAGATGGAAAGTGTGGTGCAAGGTCAACA AAATATTTCCAAGAAGATGGACAGAGTTTGGGAGAACACAATCAGTCAAT TCCCAAAGAATTCATCTGTTTTGGTCAAAGAGAACAAGGATTCAGATTCG GACAGTGAGAAAAAATCCTCAACTCCTGCTTTAGAAGAAGTTGGAGAATC ATTTGTCTCTAGATTGGTGAGAGGTAAAGATGTCGATGACGAAGTCAGTG GAAGTGGATCTGGTGGTTCTGGATGGAAGAAAGACTTGGTATCAGATACC CAACAAAAGATTCTCAAAGAGCAAGAGAGAATCCAAAAGATGGCAGACCG AGTTGTTCACAAAGCACAGAAAGATCATAAGGATTATGTAGATCGTGTTT TGAAACAACCATCACCACAACCTCAACAATATGTGGAGCATTTAAATGCA GAATCTCTACCTGGCATGGATAAACGTTCCAACATTACTACACCTACACA TAAACCATTCAAATTCCAACAGAAAATGAAGAAAACTTTACAAGCGCTCA AAACTAGCCTACGTTTGTTTGAGGAGGAGAGAAGAAGGCATCCAACCTAT ACAATGACTTTCCTGAAGGAGCGTATCAAAGAAGCATTGCGACGAAAAAT TAAACACGACATTGTCAAATTCGCCAAAAGAGATGACGCTGGAGTGGGAC TAACCGGTGAATTCCCTGAGAAGAAAAACGTTCTTCAGATAAAGCCACTG GGTAAGCCATACCCTATCGAAGGTACAACGCTTGGTTCTAGAGCGAGAGC TTTCCGAAAAGCCAGTCTGAGAAAAAGAGTATCGAGCCCAAGTCGAAGGA TAAGCAAACGAGACCAACATAACTCATTGCGTGGATTGATTCCGTCTGCT ATTGGAGACATGCAACCTTCAAATGAAAAATCCATCCTAAGTCCAACTAG TCCAGCTGTAGAGGTGCTTCGAGAGAAAGAGAAGATTTCTAATATTGGTC ATAATAACAATAGTGCACCAAGTGGCAGCTCCAACGGCATTCTCAATGGA CAAACTGAGAGCGTATTAGCTCGGCCATGGGATGAAAGTTCACTTCACGC TTTACAACAGTTACAGAACGATTACAACAATTTGAAAATGAAACTTCAGC AGCAACAAAAACAACAACAATCTCAAAAACCCGACATATCAGTCGGTGAA ACAGGAACAAGTCCTGCAGATGAAGAAACACCACCTGTTGGTCCTGACGG CAAACCATATCCTAATTCAGGACCACAACAAGATGATAGGAAAGAAGAAG ATAAAAAAGGTGAGAATTACACTGACTATTTTGTGAAGAGTTTCTAGAGT GTGCTCAAAAGAATCGAGATTGATAACGTATCGAAAAGCCAATACATATC GGCATATGTGTGTAAATTAGAAGTTTTCTGACCTCCTTTTCCAAAGGTTA AACAAAATTTCCTCATTAAATATCTTATTCTTTTAAAAGGTGACGAAGCA AAACAGCAAGAGAATTCACCGAACCATCCAGGAGAATCTGGTAAAGACGA GCTAGGATCACATCTCATCACCAAATTGCAAAAAGCAGGGACAGGAGGTC TACAAAAACCAACGACTGACAATACTTTTGAAGCTGGACTTTCTGATGGT ATCGAGGAACAAGTTGAGAAACAAATCAATAAACAGCCAAATGACCAAGG GAAACAAGTCACTGGTACCACAGCTGACCAACAAGCCAAGAATGACAGCA ATTCCCAACAGGTACAAGACCCACAACCCGCACAAAGACCCGAAGACCAC AAACAAGAGGAATCACAACTACAAATGTTACCACAAGATAACGGTAACAA TTTTACACAACCTGTCAACGTGACTGCATTGGAACTTGGAATTATCAAAC TCCTCAATGACTCATCGCGTTCACCACATGCTAAAACAAAGCACGGTCAA AAAATGGAAGAATTAAACATGAAATATGAGGCTTTGAAATTGCCCATTGA AAATGGTGAGTTTTGGCCCATTCCCGAGAATCAATCAAAGGGGAAGAAGA AACTAAGAAATGATGCAAAGGATAGGGAAAAAGCAGGAAATAACGATGAT ACAACAGAGGAGGAAATGCCTCAAATTGTGGATGCCACACCCACCGAAGC GGCGCCACCAACCACAGGTGATTACCTGACACAGAGATTGAAACTGATGG AACTGTCTGCTCTCTTATCAGCTAACAATAAACCAAATACTACAACACCT GAGCAAGATCCAGCAGCGACGCCCGTAGATTTGAAATTGGACACACCAGA AAGTAACATGGATGGAAACGACATGACGACTAAAGCAAGTACTGATCCTT CAGATGAAATGACCATACAGCTCCAACCACCATCTTTACCGGCTACGTCG ACCGAAGCCTTGGCAACTAATGACGCAAACAATACTACCAATATAGAGCA GCCACCAACTCCAGCTGAACTTGCCAAGAAGTTAGCTGATCATCTGAATC CAAACCAAGGGCAGATGAATAATATCCAACCAACTTCTCAACCAGTAACA CCTCATCAGATACAACATACTTCCAAACCCGATAACGCACAACCAGTTAT ACCGATCCCGATGGATAGCCAACTCGGGAAATTATTATATCCGAAACCGG ACGATCGGGTTAGCCATAATACGTCAACATCGATGGTTTTTGACGGTAGT CAGGAACGGATTAGTACAAGTGTTGACGGAACGAACTACAGTTCCATCCT CATTGACCAAACAAAACAATTATTAGACAAAAACAAAATTAAACGAAAAG ACTTATTTGATTTGTTGCAGTCAAGTCACGTGTTAGATAATTTACAGGCA GTTTTTCCAAACGAGAATACGAACAATTTAATAGAATCTTTGAACGTGCA AGCGGGACTCAGATCTCAAGTCATCGGTAAGAAGAATACAGCTCCGATCA ATGGCAACATTCATATAACTGTTCAGAAAAAAGGAGGAGAATTTTATTTG ATTCCAAATTCAAACGAAGCTTATCAAAAACATTTGGTACCACAAGAAGT TGGTTTGAAGCCAGTACCTGCCAAAAAGAAAGTATAAAATAACACAATAT ATGGTCCAACAAATATAGTTAAAAGTAAATTTTACTTCATTTTAATGTAC AGTATATCTTACTTTTTCTTGAGAGTCTCGAAAATTGGATATCAACATTA AAGAAGCCTTATAGGATGTGTCAAAGCAATATAATAATAAAAAACGGTGT GAGTCATGGAGATTCAAAATCATTTGATAAAAAAAATTATTGCTGAAAAA ATTGAAGATGATGTACATAGGTAAATTTTATAAGAAATAATTAATAACAA TATAATTCATAATTTATAGTTTTTTTAATCTCTACAATAACAAAAATGTG TGCTAAATTGGACAAAGCAATTAAAAAAAAATGAATCAGGGCTGAAACAG ATTTAATCAACTCTGATTAATAGACTCGTGTCGCAGACCCTTTGTGACCC CTTCATTGGGAACGTATACTAGACTCTCGTAATTATTAAGAAATCTTTAA AAATTTGAGGTTGAATCTTTATCCCAAACCAATAAAGAAATATAAGAAAT GTAAAAAATTCCATCTCTATTGGCATTCATGTGCTTAATTTAATTCCTAG TGTCCGACTGGCCAAAAAATATCGGGTATCGAAGCAGGAGGGTGTAATGT TATGTACAAAGCCAGAACAACGTTAGATTAAACAGAAGGTAATTTCATCG AAGTCGTCCATTTTCGTGGAAGTTTCGTCCTTTAAGATCACGACTGATTC TCATTTAGAAACTTTTGCATGTGCAATTTTAATGATAATAGTGTACAATT TCAATATCAATATATTCTCAAGAATCCCAAGCATAAAAAATTATCAAAAC AAAATAAAAAGTAAGAACCTGTTAAAGTACTGAACTGAAAAACCAGAAAG TAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013168TCONS_00013168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013168-proteinTCONS_00013168-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000162supercontigsc0000162:400199..408852 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RBBP6PREDICTED: E3 ubiquitin-protein ligase RBBP6 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01 0 0.01 0.01 0.38 0.32 5.28 6.83 1.02 1.38 1.79 1.31 4.23 4.12 2.29 8.4 4.12 4.11 0.01 0.02 3.18 3.08 1.57 2.18 6 7.21 0.47 0.1 0.11 0.08