XLOC_007583 (gene) - C. hemisphaerica

Overview
NameXLOC_007583
Unique NameXLOC_007583
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000170:292073..301413+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007583 ID=XLOC_007583|Name=XLOC_007583|organism=Clytia hemisphaerica|type=gene|length=9341bp|location=Sequence derived from alignment at sc0000170:292073..301413+ (Clytia hemisphaerica)
TCTTGCTTTTAGAAGAATCCAGGATCAGCGAAgataattttttaaacttt tcttcaaaagcGGAAAGTTTGAAGgtcagttttttttgtttcgccCTCTC ATTTGTCTAATTAGTTTTACTCACGATTTTATAGTCTTACACCATCTAAG TTCTACGCTCTATTCTAAGCTCTTATAAGAAGATCTTAAGAACAAAATGA TACATATTCTTGGTGGAATTTTCAtataaataacattttaagataaaatt ttgtaactatttttttaacttgaatGTTTTCCCCGGGTTTTCAAAGCTTG TTTCCTTACATTGTTCAGAGATTTGAAATAATGTAATATTTATGTTACCC GTCTATCCTCCGACTAAAATATTCTAGAAAATTACTTTCTCTTTGTtgaa aaaaagagttttaaaactttcttcataTTTTCTGATAGCTGAAAAATGGA ATCTTTTAAGATCATGTATTCTAAATAACTCAGGCGCTTATCCTATTTTT ATTGCTCTTTGAATACTCCCCTTAAAAACCATAATACGATTTTAAAGCCG CAGTGTTGGACAGTTTTATTCTCAGAAATCTTCCTGGAGTCGACCCCTTA ATACGAAGGGGTTAGGTTTTATAGGAGTGCCTaatgaataaaattttgaa atctttcaaaacgaaaaattttctttttttgtttcttaatcATTTCACTT GTTTTTGAAGTTTTGTTCAATGAAAATGGAGAGAGAGAGAGCGGAAGAAT AGAGCTAGACTGAATCAAGGAAAATTATAATAATATATAACAGAgtatga aaaaaggaaaaaagctgttaaaaacataatttttaagaGAGGAAGAACAG TGTAAAAAAAGCTGTAAAAattgttttggtttttctaaatttttaataat attatattttatgctgtgttcattttatttttaggagGCTGTTGTAACAC TTGAGTCCTTACACAAGCTTAAAgaggcacacaacgttcttgAAAACATT TGGCAAAATCTAAGTGAAGCTTCGCAGAACCAACTGAACAATGAGATCCT TACAATACGTGATAAAATACAGAACGGACTCGAAGTGACGTCATTGAAAT TACGTAATGAAGAATCAAGACGAAAAGTGTTTGATAAGTTTACGGAAGCC GAAGAACTTTGTAACAGCTTTGGTCAAGAGATTCAGGATATTATGGACGC TCAAAATTTAACGACTTCAGAAAAAATGCACAAACTCGAAGTAAGTAAAA CCTTTGGTTAGTTTCCGGACACCCTCGGTCCCAAAATATTGTAAATTTCC CTGACGAACTCTGGTTTTCCCTGGCTGCTCTTAAAAAATATATCTTAATA TGTTTTCAAACGGCAGGCAGTTTTTATTAGCTGACGTTTTTCACATTCCC CGGATGCCTGTTAAGATATGATATTGTGTTATGTTGTATTTCTTCAAATT GCTAGACGGCTTATGGTAAGGAATATGGAAAGTGATCAAAGTGAAGAATA GAACCTGAGtgctagactggagtcgtttatataAACCACTAGAACTAGAA TCGTTTTATCATCCACAAAATACAGTAATTTCTGGTAGTTTTGGTGTTAT ATGTGACAATACGATAACTGTTTATACAGGATAATATTAGTTTGTATATG TGTTTGTGTATACTATAATTAGTCTTGCTTGATTTCTGTTATGtctaaat tagtcgtctagcatgctagattAACTGAGTGCTCGAAACTTCCTTCAGCC TTGGGAATGTTTCGCCTTCAGTGCAAAGTTCAAGCTCTTCACTAATGCTG GTATAACTGACATTGGCTGAAAAGTCTTTCCAAAATAAAGTTTATAAACC CTTTTTATTCTCTTCTGAAATTTCAGTCATCAAAGAGTGAGCTCTTATGT TTATGCGATGCTTTCAAGGAGAGAGTTCGGCTAACACAAGGTCTGGATAA AAATGAAAGCGAACTACTTCATCGAAAAATCAAATCACTTGCTTCGAACA TTCACCATTTGTTCAACGAGAAGTCACGTGTTTTAAATGACTGGCAAATG AAAGAACAGAATTTGAAAGCCATTGGGAAATGGTTGCTACAATTTGTTGA TGTTTTGAATGACGAGTCCTTGGTTGATCAATGCAAAGATATTAAAGAAT CTGAACTCTACATCAAGGTACAATTTTGCTTCAATACTTTTTAtccttta ttcatgatatgcaccattgcaatgtcttctgatattaCTTCACGGGCCCA ATAGCTGATTGTTTGTAAGTGNGTTTCCGGACACCCTCGGTCCCAAAATA TTGTAAATTTCCCTGACGAACTCTGGTTTTCCCTGGCTGCTCTTAAAAAA TATATCTTAATATGTTTTCAAACGGCAGGCAGTTTTTATTAGCTGACGTT TTTCACATTCCCCGGATGCCTGTTAAGATATGATATTGTGTTATGTTGTA TTTCTTCAAATTGCTAGACGGCTTATGGTAAGGAATATGGAAAGTGATCA AAGTGAAGAATAGAACCTGAGtgctagactggagtcgtttatataAACCA CTAGAACTAGAATCGTTTTATCATCCACAAAATACAGTAATTTCTGGTAG TTTTGGTGTTATATGTGACAATACGATAACTGTTTATACAGGATAATATT AGTTTGTATATGTGTTTGTGTATACTATAATTAGTCTTGCTTGATTTCTG TTATGtctaaattagtcgtctagcatgctagattAACTGAGTGCTCGAAA CTTCCTTCAGCCTTGGGAATGTTTCGCCTTCAGTGCAAAGTTCAAGCTCT TCACTAATGCTGGTATAACTGACATTGGCTGAAAAGTCTTTCCAAAATAA AGTTTATAAACCCTTTTTATTCTCTTCTGAAATTTCAGTCATCAAAGAGT GAGCTGTTATGTTTGTGCGATGCTTTCAATGAGAGAGTTCGGCTAACACA AGGTCTGGATAAAAATGAAAGCGAACTACTTCATCGAAAAATCAAATCAC TTGCTTCGAACATTCACCATTTGTTCAACGAGAAGTCACGTGTTTTAAAT GACTGGCAAATGAAAGAACAGAATTTGAAAGCCATTGGGAAATGGTTGCT ACAATTTGTTGATGTTTTGAATGACGAGTCCTTGGTTGATCAATGCAAAG ATATTAAAGAATCTGAACTCTACATCAAGGTACAATTTTGCTTCAATACT TTTTAtcctttattcatgatatgcaccattgcaatgtcttctgatattaC TTCACGGGCCCAATAGCTGATTgtttgtaagtgacgtaaaatcagtcaat acgtcactttcaaccaatcagcttttgggtccgtggaagacattgcaatg atgcAGATCATGAATTGCGTCTGCTTGGTACAGTTGACTTTCTAATTACA GCTTTAATTGAAGtcatagaaaattttcttcatattagaatggtccaaat acggagAGTTTTCTCCTGGTACTACAGTTTTCAAGTTGATGAAACAAAAC aactttttgttgttgaaaacaTCGTGCTATTCTGAACCACAAaaagttcg aataatagaggttcgaataatagaggttccaATATAAGAAAGACATGCTA GGTAAGATAAATTTGAgaatcaatattttttcaaactgaatCAAAATTTC AGGTATTATTCAATAAAGCATATAAAATTCCGATGGCTTGTAGTAAACAA ATGGGTTATGGGattttaaataatgttaatctcttttttttcttctccca GAAATGGAAAAAGACTCTGGATGATAGGAGCCAAGAAATTGCTGATATCA TCCACCATTTTGAACACAACGAGTTACAACAAAAGAATCGCGAAAATGTT TTAACCTCACATCAAACAGTCAAAGATTTGATAAAAGAACAACTCCATAA GCTAACATccatgaaagaaaaaacaaaaaatcttgaaataatgTCTACCC AATTAACTGACTTGATATCAAACACTTTGGCCGAAGTTTCATCGCTTAAC GATAAATCTCAATTGGAAAGATCGAAAAAAGATATGGAGAACAAAATTAA CGAGTTACAAATTGAGAAAGattctttttcagaaaagtgCATCAAACTGA GAAATGTCGAGATCTTGTTGTCAAATTGTGAAAGGATTGTGTCTTCTGGT GATGATCTGGTGAAACGTATCGACCAACATATACTTACCCTAGAGGGGAA TGATCTCGAGTCCCTTCACAAGCTTCACGACTGTTTGGCAAATGAGAGAA AATGGTTAACAGGTGCTCGAGCTATGTTTTCGTTGGATTTGATGGGAATT GAAGAGGAAACAGAAATGACCCTTCAAatggaaaagaaacaaaaatatca aaaagatttACCAAAACATGAAGCTAATTTGAAAGAGTTATGTAAACTTT GTGAGAGATTACAAACAAGCAATGTCACTGGTTTTGAAGAACCGTTAAAA GTCTGCGAAGAATTGAATGTGGAATTTCAAGAGGTCAAACAGCTCTCGGT GGAACAGAATGAAGCCTTTGAAGATGCAATGGCTGAGGAAAATGAGTTTT ATGCACAACTTGAAAACTTGTACTCTTGGATGGAAAAGgttataatattt ttcaatcctGTCTAAAGTTTCTTTTAATTATTATCATCTTTTTGCTACTC TTCTTACCGTGTTCTTACCCTTCCTCAACACATAATTTCTACGTCAACTT TCACTATGAACATTTCCATTTCATGTTGGTGTTTTTTAACTATTTGGCTA TGTTTGCGTTCCTTATAACAATTTTTCCAGGTGAAGGTATAAGCTATAAA ATTGCCAGCTTACAACATTACTTCTCTTGATTTGACTAAAATACAATATA TTTTCCCTTATTTCAGGCTGGAGACATGCTACAAAAAGACAATTTCTCAG ACTCAGATTTACAAACCATTGTGGAAGAACAAGAGCAACATTACCATTCT TTCACCGAGATCTGTCAAAGTAGTATCTTACTATCAGACAAAATGGTATC GCAGACACGCCAAGAATCCTTCAATCAACAAATGGAACAAGTGAAGCTAC AATGGAGCGATTTATGTTACCACATAACTCAACGCAGGCGAGCTAAAGAG TTACAGAcactgaaaaatgaagaaaacgcaACCTTGTCATCAACAGAACC TTTAGAAACACAGTTATTACATATCAATCAGCTGGTAGAGAAAATAGACT CGGTCGGTTTTGAAAGTAATGAAGCAGAACCTcttaaaaatgagatttta ggCCATAAAAGGGACTTAGAGAAAGCTTCGATGCTGAGAGATAAGATGAA GAAACGCTATACCGAAGAAGTCAAGAATGTCATCATCAGTGTTGAAGAGT ATGTTATTGATATTGATGATCCAGATTTTGAGCACGTGATCGAAGTGTTG TATTCAAATCAAACCAAACTTGATTCAGCTCGATCAACGATGGATGATCT TTCCAAGGAGGAAGAGAATCTGAAGGAATGGCTACCTATTGAAGATTACA GAGAGTATGTTGAATGTGTGACTGAAATACAAGAGATTTTCTATGAGAAA GAAACAAGACATACTAACATGGCTTTGATTGTTCAGGTAGGTTTTCAAAT GTTCATTTTCGATCTTTAGTCTCTACAGTCCGTATAATGGATAATTCAAT GTTGCAACTTTTCCGTCTGTAGATAGATATCCGTCGCTAAATTTTCTTGG ATTTCCGTCCAAATAACAAGCCTTTAAAGTAGAATTTCGTGAAATTGGAG TCAAATTTTAGACTTTTTGCCCAGGTTAACCAAAGCATGTTGCAACACTG TGAATAGTGTTtgctttttaaagttttaaactGGCGTGTGGGACTTTATT AAGCCAAGTTCTTCCTTTTCTTGTAATTACATCTATATGCTTCAATAAAT aataattgaataaatatttttccattttacCAATATGATAGTTATAGTCC gttaattttcatttggataaTCGTTGACGATATTCAAGTGCTATCCGTGG ACAGCTTAGATTTTGTTGGCGCTTTCACTTGAGTATCTAGACTAGAGTCT AGTTCTTAATTctgtttgatgattttttatgacactgAGTCTAGTGAAGT TCaattaatcgcgccatccagtctatcgaAAAGAACTTAAGTGGGCTTGA GTCTGCCTTGAGATATCCCTAatcatttttattgtttacttttattttag gTGGATAAACAACTCCGTGGTGTCGAAATCATTTTACAAAGCATCCAAGA AATCGAAAACAACGAAACTGACGATTTACAAGAAAAGCTGAAAACTATCG ATGAAAATATTCGTAGTTTGCAGCAACTGAGAAAAGAGCTGACCGGTTCT AGAAAATTACTGGAGAAAATTGATGTTGATTTTTATCCGTTGATCGTTAG AACAATGCAGGAGAAAGTGAGATATAACTTACCACTCATGGATCAATATT TGACGTCTTTAAAACGTCTTAGTGAGGATACGAATACGACGTTGATCAAT TTTATGGACGGCCGTAAGCAAGCAGAGGACTACCTGGAGAATCTAAATCA AACAGAATATTTCTTCACTACAGAACTGGTAAAGGCTGATTGTCTTTATA ACATGAAGATTGTTCTGTCTACCGTATCCTCGGCAATTAAAGATCATCGT GAACAAATGAACAAGCTGTTGAActattgtgatttttttatgggGAGATT CCCTGATAAAAAGAAAAGGACGTTGCTTGGTTGTTTAGAGTCTTGTCGGA ATCGAATGTACGATTTGGAAGACCACTTACAAAGAGAAGATGTCATTGTC ATGAAGAAACTGTTAGTCTTGAATGGTATCGAAACACAGTTGGCTACTAT AGAAAATTCACTTGAACAGTCTGAACTGTTGATTCAATCTGACCAACCGT TTGATGCTTTAGCTATGACTCGAATGTTAACTGATTTCGAGGACACTATT GATACTCTGGAGACTGAGAACCAGGAATTCTTTAATGATCTTCCCGAAAA AGATTTATTAGAGATTTTGGAGTTTATCAACCGAGTTCAAGGCGCGTTAG CTCAACTTAAAACCGACCTTGATGTTTATTGCATTGCTAAAGCTGAACGC GGAGGGAAatcaaaaactaattttgacTACTTGGAGATCATTGAATTGCC ATGTATTTCAATACAGCCATTGCTGGTTGAATATTTAGACgaatctgatg atgaaattgTGGTCAAGTCCCAATCACCATTGAAGCGAAATAGAGGACCA TCTATAGACGAGTTTCTTTGTAGGGAGCTTGAAACTGCAAATCAAGAAAA TGCTTTAGAGTTTCAATTTGATTCTAGNGCAAGCAGAGGACTACTTGGAG AATCTGAATCAAACAGAATATTTCTTCACTACAGAACTGGTAAAGGCTGA TTGTCTTTATAACATGAAGATTGTTCTGTCTACCGTATCCTCGGCAATTA AAGATCATCGTGAACAAATGAACAAGCTGTTGAActattgtgattttttt atgggGAGATTCCCTGATAAAAAGAAAAGGACGTTGCTTGGTTGTTTAGA GTCTTGTCGGAATCGAATGTACGATTTGGAAGACCACTTAACAAGAGAAG ATGCAATTGTTATGAAGAAACTGTTAGTCTTGAATGGTATCGAAACACAG TTGGCTACTATAGAAAATTCACTTGAGCAGTCTGAACTGTTGATTCAGTC TGACCAACCGTTTGATGCTTTAGCTATGACTCGAATGTTAACTGATTTCG AGGACACTATTGATACTCTGGAGACTGAGAACCAGGAATTCTTTAATGAT CTTCCCGAAAAAGATTTATTAGAGATTTTGGAGTTTATCAACCGAGTTCA AGGCGCGTTAGCTCAACTTAAAACCGACCTTGATGTTTATTGCATTGCTA AAGCTGAACGCGGAGGGAAatcaaaaactaattttgacTACTTGGAGATC ATTGAATTGCCATGTATTTCAATACAGCCATTGCTGGTTGAATATTTAGA CgaatctgatgatgaaattgTGGTCAAGTCCCCATCATCATTGAAACGAA ATAGAGGACCATCTATAGACGAGTTTCTTTGTAGGGAGCTTGAAACTGCA AATCAAGAAAATGCTTTAGAGTTTCAATTTGATTCTAGTTTCAAAGAAGA CGATTCCACGCTAGATTCTCAAGACTCCGATACATTTGCAAGAACTCATG ATACTTCAACTCTTGATTTCAAATCTCAAGAGCGAGATATTGTCAAACGc aagttattttcaaatcaatctcCCGAATATAGCTCTGAAACTGTTGAAAG TTTCCAAGAATCGAGCACCTCAATACTATCTCCTGAAGGTAGTGCTGTGA GTTTTGAGGGAAGTCGTTTAGNACAAGAGAAGATGCAATTGTTATGAAGA AACTGTTAGTCTTGAATGGTATCGAAACACAGTTGGCTACTATAGAAAAT TCACTTGAGCAGTCTGAACTGTTGATTCAGTCTGACCAACCGTTTGATGC TTTAGCTATGACTCGAATGTTAACTGATTTCGAGGACACTATTGATACTC TGGAGACTGAGAACCAGGAATTCTTTAATGATCTTCCCGAAAAAGATTTA TTAGAGATTTTGGAGTTTATCAACCGAGTTCAAGGCGCGTTAGCTCAACT TAAAACCGACCTTGATGTTTATTGCATTGCTAAAGCTGAACGCGGAGGGA AatcaaaaactaattttgacTACTTGGAGATCATTGAATTGCCATGTATT TCAATACAGCCATTGCTGGTTGAATATTTAGACgaatctgatgatgaaat tgTGGTCAAGTCCCAATCACCATTGAAGCGAAATAGAGGACCATCTATAG ACGAGTTTCTTTGTAGGGAGCTTGAAACTGCAAATCAAGAAAATGCTTTA GAGTTTCAATTTGATTCTAGTTTCAAAGAAGACGATTCTACGCTAGGTTC TCAAGACTCCGATACATTTGCAAGAACTCATGATACTTCAACTCTTGATT TCAAATCTCAAGAGCGAGATACTATTAAACGcaagttattttcaaatcaa tctcCCGAATATAGCTCTGAAACTGTTGAAAGTTTCCAAGAATCGAGCAC CTCAATACTATCTCCTGAAGGTAGTGCTGTGAGTTTTGAGGGAAGTCGTT TAGATTTGACACAGGACCTTAATGTATTTGACAGCTCTTCTTCAATGGAC GAAACATCTATATCAAACTGTGAAGATGTATCCCCCGAGACCGCCAAAAC CAATTCTATGGATCAAGAGTCTTCAGATCAAAGTATACCAGAAAATGCAT CAGATTTGAATCAAAACGAGCTAATTCCTGCTAAATCCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013572TCONS_00013572Clytia hemisphaericatranscript
TCONS_00013573TCONS_00013573Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013572-proteinTCONS_00013572-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000170supercontigsc0000170:292073..301413 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.01 0.02 0.02 0.47 0.36 0.07 0.17 0.05 0.04 0.03 0.04 0.1 0.04 0.01 0.02 0.03 0.03 0.08 0.06 0.19 0.11 0.04 0.03 0.31 0.28 0.01 0.01 0 0.02